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Sequence, Chains, Units

Title C-TERMINAL DOMAIN OF ELONGATION FACTOR SELB COMPLEXED WITH SECIS RNA
Keywords WINGED-HELIX, TRANSLATION/RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1WSU     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    E 22 465 0
2  RNA    F 22 465 0
3  RNA    G 21 445 0
4  Protein   SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR  A 124 1007 0
5  Protein   SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR  B 122 994 0
6  Protein   SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR  C 102 845 0
7  Protein   SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR  D 121 990 0
8 Water     273 0 273
total       807 5211 273
Proteins
Unit 4   GLY511 SER512 GLU513 THR514 GLN515 LYS516 LYS517 LEU518 LEU519 LYS520 ASP521 LEU522 GLU523 ASP524 LYS525 TYR526 ARG527 VAL528 SER529 ARG530 TRP531 GLN532 PRO533 PRO534 SER535 PHE536 LYS537 GLU538 VAL539 ALA540 GLY541 SER542 PHE543 ASN544 LEU545 ASP546 PRO547 SER548 GLU549 LEU550 GLU551 GLU552 LEU553 LEU554 HIS555 TYR556 LEU557 VAL558 ARG559 GLU560 GLY561 VAL562 LEU563 VAL564 LYS565 ILE566 ASN567 ASP568 GLU569 PHE570 TYR571 TRP572 HIS573 ARG574 GLN575 ALA576 LEU577 GLY578 GLU579 ALA580 ARG581 GLU582 VAL583 ILE584 LYS585 ASN586 LEU587 ALA588 SER589 THR590 GLY591 PRO592 PHE593 GLY594 LEU595 ALA596 GLU597 ALA598 ARG599 ASP600 ALA601 LEU602 GLY603 SER604 SER605 ARG606 LYS607 TYR608 VAL609 LEU610 PRO611 LEU612 LEU613 GLU614 TYR615 LEU616 ASP617 GLN618 VAL619 LYS620 PHE621 THR622 ARG623 ARG624 VAL625 GLY626 ASP627 LYS628 ARG629 VAL630 VAL631 VAL632 GLY633 ASN634
Unit 5   GLY511 SER512 GLU513 THR514 GLN515 LYS516 LYS517 LEU518 LEU519 LYS520 ASP521 LEU522 GLU523 ASP524 LYS525 TYR526 ARG527 VAL528 SER529 ARG530 TRP531 GLN532 PRO533 PRO534 SER535 PHE536 LYS537 GLU538 VAL539 ALA540 GLY541 SER542 PHE543 ASN544 LEU545 ASP546 PRO547 SER548 GLU549 LEU550 GLU551 GLU552 LEU553 LEU554 HIS555 TYR556 LEU557 VAL558 ARG559 GLU560 GLY561 VAL562 LEU563 VAL564 LYS565 ILE566 ASN567 ASP568 GLU569 PHE570 TYR571 TRP572 HIS573 ARG574 GLN575 ALA576 LEU577 GLY578 GLU579 ALA580 ARG581 GLU582 VAL583 ILE584 LYS585 ASN586 LEU587 ALA588 SER589 THR590 GLY591 PRO592 PHE593 GLY594 LEU595 ALA596 GLU597 ALA598 ARG599 ASP600 ALA601 LEU602 GLY603 SER604 SER605 ARG606 LYS607 TYR608 VAL609 LEU610 PRO611 LEU612 LEU613 GLU614 TYR615 LEU616 ASP617 GLN618 VAL619 LYS620 PHE621 THR622 ARG623 ARG624 VAL625 GLY626 ASP627 LYS628 ARG629 VAL630 VAL631 VAL632
Unit 6   LYS517 LEU518 LEU519 LYS520 ASP521 LEU522 GLU523 ASP524 LYS525 TYR526 ARG527 VAL528 SER529 ARG530 TRP531 GLN532 PRO533 PRO534 SER535 PHE536 LYS537 GLU538 VAL539 ALA540 GLU551 GLU552 LEU553 LEU554 HIS555 TYR556 LEU557 VAL558 ARG559 GLU560 GLY561 VAL562 LEU563 VAL564 LYS565 ILE566 ASN567 ASP568 GLU569 PHE570 TYR571 TRP572 HIS573 ARG574 GLN575 ALA576 LEU577 GLY578 GLU579 ALA580 ARG581 GLU582 VAL583 ILE584 LYS585 ASN586 LEU587 ALA588 SER589 THR590 GLY591 PRO592 PHE593 GLY594 LEU595 ALA596 GLU597 ALA598 ARG599 ASP600 ALA601 LEU602 GLY603 SER604 SER605 ARG606 LYS607 TYR608 VAL609 LEU610 PRO611 LEU612 LEU613 GLU614 TYR615 LEU616 ASP617 GLN618 VAL619 LYS620 PHE621 THR622 ARG623 LYS628 ARG629 VAL630 VAL631 VAL632
Unit 7   SER512 GLU513 THR514 GLN515 LYS516 LYS517 LEU518 LEU519 LYS520 ASP521 LEU522 GLU523 ASP524 LYS525 TYR526 ARG527 VAL528 SER529 ARG530 TRP531 GLN532 PRO533 PRO534 SER535 PHE536 LYS537 GLU538 VAL539 ALA540 GLY541 SER542 PHE543 ASN544 LEU545 ASP546 PRO547 SER548 GLU549 LEU550 GLU551 GLU552 LEU553 LEU554 HIS555 TYR556 LEU557 VAL558 ARG559 GLU560 GLY561 VAL562 LEU563 VAL564 LYS565 ILE566 ASN567 ASP568 GLU569 PHE570 TYR571 TRP572 HIS573 ARG574 GLN575 ALA576 LEU577 GLY578 GLU579 ALA580 ARG581 GLU582 VAL583 ILE584 LYS585 ASN586 LEU587 ALA588 GLY591 PRO592 PHE593 GLY594 LEU595 ALA596 GLU597 ALA598 ARG599 ASP600 ALA601 LEU602 GLY603 SER604 SER605 ARG606 LYS607 TYR608 VAL609 LEU610 PRO611 LEU612 LEU613 GLU614 TYR615 LEU616 ASP617 GLN618 VAL619 LYS620 PHE621 THR622 ARG623 ARG624 VAL625 GLY626 ASP627 LYS628 ARG629 VAL630 VAL631 VAL632 GLY633 ASN634
Nucleic acids
Unit 1   G13 G14 C15 G16 U17 U18 G19 C20 C21 G22 G23 U24 C25 G27 G28 C29 A30 A31 C32 G33 C34 C35
Unit 2   G13 G14 C15 G16 U17 U18 G19 C20 C21 G22 G23 U24 C25 G27 G28 C29 A30 A31 C32 G33 C34 C35
Unit 3   G13 G14 C15 G16 U17 U18 G19 C20 C21 G22 G23 U24 G27 G28 C29 A30 A31 C32 G33 C34 C35
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany