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Sequence, Chains, Units

Title		`CONSERVATION OF STRUCTURE AND FUNCTION AMONG TYROSINE RECOMBINASES: HOMOLOGY-BASED MODELING OF THE LAMBDA INTEGRASE CORE-BINDING DOMAIN`
Keywords		`PROTEIN-DNA COMPLEX`
Experiment		`theoretical model`
Number of Models		`1`


Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit

PDB	1M97	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB
Unit	Type	Name	Chain ID	Residues	Atoms
1	Protein	`INTEGRASE`	A	96	950
2	DNA		B	9	185
3	DNA		C	9	184
total				114	1319

Proteins

Unit 1

LEU₇₆

HIS₇₇

SER₇₈

TRP₇₉

LEU₈₀

ASP₈₁

ARG₈₂

TYR₈₃

GLU₈₄

LYS₈₅

ILE₈₆

LEU₈₇

ALA₈₈

SER₈₉

ARG₉₀

GLY₉₁

ILE₉₂

LYS₉₃

GLN₉₄

LYS₉₅

THR₉₆

LEU₉₇

ILE₉₈

ASN₉₉

TYR₁₀₀

MET₁₀₁

SER₁₀₂

LYS₁₀₃

ILE₁₀₄

LYS₁₀₅

ALA₁₀₆

ILE₁₀₇

ARG₁₀₈

ARG₁₀₉

GLY₁₁₀

LEU₁₁₁

PRO₁₁₂

ASP₁₁₃

ALA₁₁₄

PRO₁₁₅

LEU₁₁₆

GLU₁₁₇

ASP₁₁₈

ILE₁₁₉

THR₁₂₀

THR₁₂₁

LYS₁₂₂

GLU₁₂₃

ILE₁₂₄

ALA₁₂₅

ALA₁₂₆

MET₁₂₇

LEU₁₂₈

ASN₁₂₉

GLY₁₃₀

TYR₁₃₁

ILE₁₃₂

ASP₁₃₃

GLU₁₃₄

GLY₁₃₅

LYS₁₃₆

ALA₁₃₇

ALA₁₃₈

SER₁₃₉

ALA₁₄₀

LYS₁₄₁

LEU₁₄₂

ILE₁₄₃

ARG₁₄₄

SER₁₄₅

THR₁₄₆

LEU₁₄₇

SER₁₄₈

ASP₁₄₉

ALA₁₅₀

PHE₁₅₁

ARG₁₅₂

GLU₁₅₃

ALA₁₅₄

ILE₁₅₅

ALA₁₅₆

GLU₁₅₇

GLY₁₅₈

HIS₁₅₉

ILE₁₆₀

THR₁₆₁

THR₁₆₂

ASN₁₆₃

HIS₁₆₄

VAL₁₆₅

ALA₁₆₆

ALA₁₆₇

THR₁₆₈

ARG₁₆₉

ALA₁₇₀

ALA₁₇₁

Nucleic acids

Unit 2	G₂₁	C₂₂	T₂₃	A₂₄	T₂₅	A₂₆	C₂₇	G₂₈	A₂₉
Unit 3	T₈	C₉	G₁₀	T₁₁	A₁₂	T₁₃	A₁₄	G₁₅	C₁₆

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:	PDBscan.pl (15 Sep 2016)
Author:	Peter Slickers (`slickers@leibniz-fli.de`), IMB Jena, Germany