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Sequence, Chains, Units

Title COMPUTER MODEL OF A COVALENT COMPLEX BETWEEN D(GTGGCGGCGGCC) AND THREE MOLECULES OF ANTITUMOR DRUG ECTEINASCIDIN 743
Keywords ANTICANCER, DNA, ECTEINASCIDIN, DEOXYRIBONUCLEIC ACID
Experiment theoretical model
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1KML     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 12 379 0
2  DNA    B 12 373 0
3  Ligand      3 0 288
total       27 752 288

Nucleic acids
Unit 1   G1 T2 G3 G4 C5 G6 G7 C8 G9 G10 C11 C12
Unit 2   G1 G2 C3 C4 G5 C6 C7 G8 C9 C10 A11 C12

Ligands
Unit 3   ECT1 ECT2 ECT3

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany