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Title CHIMERIC HYBRID DUPLEX R(GCAGUGGC).R(GCCA)D(CTGC) COMPRISING THE TRNA-DNA JUNCTION FORMED DURING INITIATION OF HIV-1 REVERSE TRANSCRIPTION
Keywords RNA:RNA-DNA CHIMERIC HYBRID, RNASE H, REVERSE TRANSCRIPTASE, DNA/RNA COMPLEX, DNA-RNA HYBRID
Experiment NMR
Number of Models  20


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1BYX     released     available     available     Quaternary Structure Server  
NDB   1BYX     not released                    


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 8 260 0
2  RNA    B 8 253 0
total       16 513 0

Nucleic acids
Unit 1   G1 C2 A3 G4 U5 G6 G7 C8
Unit 2   G101 C102 C103 A104 DC105 DT106 DG107 DC108

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany