JenaLib Home    
[Image Library Home]     [Helix Analysis Home]     [Image Library Entry]   

Sequence, Chains, Units

Title SOLUTION STRUCTURE OF A DNA DODECAMER CONTAINING THE ANTI- NEOPLASTIC AGENT ARABINOSYLCYTOSINE: COMBINED USE OF NMR, RESTRAINED MOLECULAR DYNAMICS AND FULL RELAXATION MATRIX REFINEMENT
Keywords DNA
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   170D     released     available     available     Quaternary Structure Server  
NDB   170D     not released                    


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 12 349 31
2  RNA    B 12 349 31
total       24 698 62

Nucleic acids
Unit 1   DC1 DG2 DC3 DG4 DA5 DA6 DT7 DT8 CAR9 DG10 DC11 DG12
Unit 2   DC13 DG14 DC15 DG16 DA17 DA18 DT19 DT20 CAR21 DG22 DC23 DG24

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Helix Analysis Home]    [Image Library Entry]   

Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany