6RK9 - Sequence, Chains, Asymmetric and Biological Units

• Title: ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE (ASPH)OXYGENASE AND TP IN COMPLEX WITH MANGANESE, N-OXALYLGLYCINE AND CYCLIC PEPTI SUBSTRATE MIMIC OF FACTOR X
• Keywords: 2-OXOGLUTARATE DEPENDENT OXYGENASE, ASPARTYL/ASPARAGINYL BET HYDROXYLASE, EGF-LIKE DOMAIN HYDROXYLASE, DOUBLE STRANDED B HELIX, TETRATRICOPEPTIDE REPEAT, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	6RK9	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE	A	429	3414	0
2	Protein	ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE	B	429	3430	0
3	Protein	ACA-LYS-ASP-GLY-LEU-GLY-GLU-TYR-THR-CYS-THR-SER-L GLY-PHE-GLU	C	17	117	5
4	Ligand	ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE	A	2	0	11
5	Ligand	ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE	B	2	0	11
6	Water			230	0	230
total				1109	6961	257

Proteins

Unit 1	LYS 330 PRO 331 LYS 332 LEU 333 LEU 334 ASN 335 LYS 336 PHE 337 ASP 338 LYS 339 THR 340 ILE 341 LYS 342 ALA 343 GLU 344 LEU 345 ASP 346 ALA 347 ALA 348 GLU 349 LYS 350 LEU 351 ARG 352 LYS 353 ARG 354 GLY 355 LYS 356 ILE 357 GLU 358 GLU 359 ALA 360 VAL 361 ASN 362 ALA 363 PHE 364 LYS 365 GLU 366 LEU 367 VAL 368 ARG 369 LYS 370 TYR 371 PRO 372 GLN 373 SER 374 PRO 375 ARG 376 ALA 377 ARG 378 TYR 379 GLY 380 LYS 381 ALA 382 GLN 383 CYS 384 GLU 385 ASP 386 ASP 387 LEU 388 ALA 389 GLU 390 LYS 391 ARG 392 ARG 393 SER 394 ASN 395 GLU 396 VAL 397 LEU 398 ARG 399 GLY 400 ALA 401 ILE 402 GLU 403 THR 404 TYR 405 GLN 406 GLU 407 VAL 408 ALA 409 SER 410 LEU 411 PRO 412 ASP 413 VAL 414 PRO 415 ALA 416 ASP 417 LEU 418 LEU 419 LYS 420 LEU 421 SER 422 LEU 423 LYS 424 ARG 425 ARG 426 SER 427 ASP 428 ARG 429 GLN 430 GLN 431 PHE 432 LEU 433 GLY 434 HIS 435 MET 436 ARG 437 GLY 438 SER 439 LEU 440 LEU 441 THR 442 LEU 443 GLN 444 ARG 445 LEU 446 VAL 447 GLN 448 LEU 449 PHE 450 PRO 451 ASN 452 ASP 453 THR 454 SER 455 LEU 456 LYS 457 ASN 458 ASP 459 LEU 460 GLY 461 VAL 462 GLY 463 TYR 464 LEU 465 LEU 466 ILE 467 GLY 468 ASP 469 ASN 470 ASP 471 ASN 472 ALA 473 LYS 474 LYS 475 VAL 476 TYR 477 GLU 478 GLU 479 VAL 480 LEU 481 SER 482 VAL 483 THR 484 PRO 485 ASN 486 ASP 487 GLY 488 PHE 489 ALA 490 LYS 491 VAL 492 HIS 493 TYR 494 GLY 495 PHE 496 ILE 497 LEU 498 LYS 499 ALA 500 GLN 501 ASN 502 LYS 503 ILE 504 ALA 505 GLU 506 SER 507 ILE 508 PRO 509 TYR 510 LEU 511 LYS 512 GLU 513 GLY 514 ILE 515 GLU 516 SER 517 GLY 518 ASP 519 PRO 520 GLY 521 THR 522 ASP 523 ASP 524 GLY 525 ARG 526 PHE 527 TYR 528 PHE 529 HIS 530 LEU 531 GLY 532 ASP 533 ALA 534 MET 535 GLN 536 ARG 537 VAL 538 GLY 539 ASN 540 LYS 541 GLU 542 ALA 543 TYR 544 LYS 545 TRP 546 TYR 547 GLU 548 LEU 549 GLY 550 HIS 551 LYS 552 ARG 553 GLY 554 HIS 555 PHE 556 ALA 557 SER 558 VAL 559 TRP 560 GLN 561 ARG 562 SER 563 LEU 564 TYR 565 ASN 566 VAL 567 ASN 568 GLY 569 LEU 570 LYS 571 ALA 572 GLN 573 PRO 574 TRP 575 TRP 576 THR 577 PRO 578 LYS 579 GLU 580 THR 581 GLY 582 TYR 583 THR 584 GLU 585 LEU 586 VAL 587 LYS 588 SER 589 LEU 590 GLU 591 ARG 592 ASN 593 TRP 594 LYS 595 LEU 596 ILE 597 ARG 598 ASP 599 GLU 600 GLY 601 LEU 602 ALA 603 VAL 604 MET 605 ASP 606 LYS 607 ALA 608 LYS 609 GLY 610 LEU 611 PHE 612 LEU 613 PRO 614 GLU 615 ASP 616 GLU 617 ASN 618 LEU 619 ARG 620 GLU 621 LYS 622 GLY 623 ASP 624 TRP 625 SER 626 GLN 627 PHE 628 THR 629 LEU 630 TRP 631 GLN 632 GLN 633 GLY 634 ARG 635 ARG 636 ASN 637 GLU 638 ASN 639 ALA 640 CYS 641 LYS 642 GLY 643 ALA 644 PRO 645 LYS 646 THR 647 CYS 648 THR 649 LEU 650 LEU 651 GLU 652 LYS 653 PHE 654 PRO 655 GLU 656 THR 657 THR 658 GLY 659 CYS 660 ARG 661 ARG 662 GLY 663 GLN 664 ILE 665 LYS 666 TYR 667 SER 668 ILE 669 MET 670 HIS 671 PRO 672 GLY 673 THR 674 HIS 675 VAL 676 TRP 677 PRO 678 HIS 679 THR 680 GLY 681 PRO 682 THR 683 ASN 684 CYS 685 ARG 686 LEU 687 ARG 688 MET 689 HIS 690 LEU 691 GLY 692 LEU 693 VAL 694 ILE 695 PRO 696 LYS 697 GLU 698 GLY 699 CYS 700 LYS 701 ILE 702 ARG 703 CYS 704 ALA 705 ASN 706 GLU 707 THR 708 LYS 709 THR 710 TRP 711 GLU 712 GLU 713 GLY 714 LYS 715 VAL 716 LEU 717 ILE 718 PHE 719 ASP 720 ASP 721 SER 722 PHE 723 GLU 724 HIS 725 GLU 726 VAL 727 TRP 728 GLN 729 ASP 730 ALA 731 SER 732 SER 733 PHE 734 ARG 735 LEU 736 ILE 737 PHE 738 ILE 739 VAL 740 ASP 741 VAL 742 TRP 743 HIS 744 PRO 745 GLU 746 LEU 747 THR 748 PRO 749 GLN 750 GLN 751 ARG 752 ARG 753 SER 754 LEU 755 PRO 756 ALA 757 ILE 758
Unit 2	LYS 330 PRO 331 LYS 332 LEU 333 LEU 334 ASN 335 LYS 336 PHE 337 ASP 338 LYS 339 THR 340 ILE 341 LYS 342 ALA 343 GLU 344 LEU 345 ASP 346 ALA 347 ALA 348 GLU 349 LYS 350 LEU 351 ARG 352 LYS 353 ARG 354 GLY 355 LYS 356 ILE 357 GLU 358 GLU 359 ALA 360 VAL 361 ASN 362 ALA 363 PHE 364 LYS 365 GLU 366 LEU 367 VAL 368 ARG 369 LYS 370 TYR 371 PRO 372 GLN 373 SER 374 PRO 375 ARG 376 ALA 377 ARG 378 TYR 379 GLY 380 LYS 381 ALA 382 GLN 383 CYS 384 GLU 385 ASP 386 ASP 387 LEU 388 ALA 389 GLU 390 LYS 391 ARG 392 ARG 393 SER 394 ASN 395 GLU 396 VAL 397 LEU 398 ARG 399 GLY 400 ALA 401 ILE 402 GLU 403 THR 404 TYR 405 GLN 406 GLU 407 VAL 408 ALA 409 SER 410 LEU 411 PRO 412 ASP 413 VAL 414 PRO 415 ALA 416 ASP 417 LEU 418 LEU 419 LYS 420 LEU 421 SER 422 LEU 423 LYS 424 ARG 425 ARG 426 SER 427 ASP 428 ARG 429 GLN 430 GLN 431 PHE 432 LEU 433 GLY 434 HIS 435 MET 436 ARG 437 GLY 438 SER 439 LEU 440 LEU 441 THR 442 LEU 443 GLN 444 ARG 445 LEU 446 VAL 447 GLN 448 LEU 449 PHE 450 PRO 451 ASN 452 ASP 453 THR 454 SER 455 LEU 456 LYS 457 ASN 458 ASP 459 LEU 460 GLY 461 VAL 462 GLY 463 TYR 464 LEU 465 LEU 466 ILE 467 GLY 468 ASP 469 ASN 470 ASP 471 ASN 472 ALA 473 LYS 474 LYS 475 VAL 476 TYR 477 GLU 478 GLU 479 VAL 480 LEU 481 SER 482 VAL 483 THR 484 PRO 485 ASN 486 ASP 487 GLY 488 PHE 489 ALA 490 LYS 491 VAL 492 HIS 493 TYR 494 GLY 495 PHE 496 ILE 497 LEU 498 LYS 499 ALA 500 GLN 501 ASN 502 LYS 503 ILE 504 ALA 505 GLU 506 SER 507 ILE 508 PRO 509 TYR 510 LEU 511 LYS 512 GLU 513 GLY 514 ILE 515 GLU 516 SER 517 GLY 518 ASP 519 PRO 520 GLY 521 THR 522 ASP 523 ASP 524 GLY 525 ARG 526 PHE 527 TYR 528 PHE 529 HIS 530 LEU 531 GLY 532 ASP 533 ALA 534 MET 535 GLN 536 ARG 537 VAL 538 GLY 539 ASN 540 LYS 541 GLU 542 ALA 543 TYR 544 LYS 545 TRP 546 TYR 547 GLU 548 LEU 549 GLY 550 HIS 551 LYS 552 ARG 553 GLY 554 HIS 555 PHE 556 ALA 557 SER 558 VAL 559 TRP 560 GLN 561 ARG 562 SER 563 LEU 564 TYR 565 ASN 566 VAL 567 ASN 568 GLY 569 LEU 570 LYS 571 ALA 572 GLN 573 PRO 574 TRP 575 TRP 576 THR 577 PRO 578 LYS 579 GLU 580 THR 581 GLY 582 TYR 583 THR 584 GLU 585 LEU 586 VAL 587 LYS 588 SER 589 LEU 590 GLU 591 ARG 592 ASN 593 TRP 594 LYS 595 LEU 596 ILE 597 ARG 598 ASP 599 GLU 600 GLY 601 LEU 602 ALA 603 VAL 604 MET 605 ASP 606 LYS 607 ALA 608 LYS 609 GLY 610 LEU 611 PHE 612 LEU 613 PRO 614 GLU 615 ASP 616 GLU 617 ASN 618 LEU 619 ARG 620 GLU 621 LYS 622 GLY 623 ASP 624 TRP 625 SER 626 GLN 627 PHE 628 THR 629 LEU 630 TRP 631 GLN 632 GLN 633 GLY 634 ARG 635 ARG 636 ASN 637 GLU 638 ASN 639 ALA 640 CYS 641 LYS 642 GLY 643 ALA 644 PRO 645 LYS 646 THR 647 CYS 648 THR 649 LEU 650 LEU 651 GLU 652 LYS 653 PHE 654 PRO 655 GLU 656 THR 657 THR 658 GLY 659 CYS 660 ARG 661 ARG 662 GLY 663 GLN 664 ILE 665 LYS 666 TYR 667 SER 668 ILE 669 MET 670 HIS 671 PRO 672 GLY 673 THR 674 HIS 675 VAL 676 TRP 677 PRO 678 HIS 679 THR 680 GLY 681 PRO 682 THR 683 ASN 684 CYS 685 ARG 686 LEU 687 ARG 688 MET 689 HIS 690 LEU 691 GLY 692 LEU 693 VAL 694 ILE 695 PRO 696 LYS 697 GLU 698 GLY 699 CYS 700 LYS 701 ILE 702 ARG 703 CYS 704 ALA 705 ASN 706 GLU 707 THR 708 LYS 709 THR 710 TRP 711 GLU 712 GLU 713 GLY 714 LYS 715 VAL 716 LEU 717 ILE 718 PHE 719 ASP 720 ASP 721 SER 722 PHE 723 GLU 724 HIS 725 GLU 726 VAL 727 TRP 728 GLN 729 ASP 730 ALA 731 SER 732 SER 733 PHE 734 ARG 735 LEU 736 ILE 737 PHE 738 ILE 739 VAL 740 ASP 741 VAL 742 TRP 743 HIS 744 PRO 745 GLU 746 LEU 747 THR 748 PRO 749 GLN 750 GLN 751 ARG 752 ARG 753 SER 754 LEU 755 PRO 756 ALA 757 ILE 758
Unit 3	DAL 253 LYS 254 ASP 255 GLY 256 LEU 257 GLY 258 GLU 259 TYR 260 THR 261 CYS 262 THR 263 SER 264 LEU 265 GLU 266 GLY 267 PHE 268 GLU 269

Ligands

Unit 4	MN 801 OGA 802
Unit 5	MN 801 OGA 802