6MSY - Sequence, Chains, Asymmetric and Biological Units

• Title: ANTI-HIV-1 FAB FAB 2G12 + MAN4 RE-REFINEMENT
• Keywords: HIV-1 CARBOHYDRATE BROADLY NEUTRALIZING ANTIBODY, HIV NEUTRA ANTIBODY, ANTI-CARBOHYDRATE, DOMAIN-SWAPPING, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	6MSY	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FAB 2G12, LIGHT CHAIN	L	210	1608	0
2	Protein	FAB 2G12, HEAVY CHAIN	H	213	1601	0
3	Ligand		A	4	0	45
4	Ligand	FAB 2G12, LIGHT CHAIN	L	1	0	1
5	Ligand	FAB 2G12, HEAVY CHAIN	H	4	0	10
6	Water			161	0	161
total				593	3209	217

Proteins

Unit 1

ASP 1 VAL 2 VAL 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 THR 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 THR 18 ILE 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 ILE 29 GLU 30 THR 31 TRP 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 LYS 50 ALA 51 SER 52 THR 53 LEU 54 LYS 55 THR 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLU 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 GLY 77 LEU 78 GLN 79 PHE 80 ASP 81 ASP 82 PHE 83 ALA 84 THR 85 TYR 86 HIS 87 CYS 88 GLN 89 HIS 90 TYR 91 ALA 92 GLY 93 TYR 94 SER 95 ALA 96 THR 97 PHE 98 GLY 99 GLN 100 GLY 101 THR 102 ARG 103 VAL 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210

Unit 2

GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 LYS 13 ALA 14 GLY 15 GLY 16 SER 17 LEU 18 ILE 19 LEU 20 SER 21 CYS 22 GLY 23 VAL 24 SER 25 ASN 26 PHE 27 ARG 28 ILE 29 SER 30 ALA 31 HIS 32 THR 33 MET 34 ASN 35 TRP 36 VAL 37 ARG 38 ARG 39 VAL 40 PRO 41 GLY 42 GLY 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 SER 50 ILE 51 SER 52 THR 52A SER 53 SER 54 THR 55 TYR 56 ARG 57 ASP 58 TYR 59 ALA 60 ASP 61 ALA 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 VAL 69 SER 70 ARG 71 ASP 72 ASP 73 LEU 74 GLU 75 ASP 76 PHE 77 VAL 78 TYR 79 LEU 80 GLN 81 MET 82 HIS 82A LYS 82B MET 82C ARG 83 VAL 84 GLU 85 ASP 86 THR 87 ALA 88 ILE 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 LYS 95 GLY 96 SER 97 ASP 98 ARG 99 LEU 100 SER 100A ASP 100B ASN 100C ASP 100D PRO 100E PHE 100F ASP 101 ALA 102 TRP 103 GLY 104 PRO 105 GLY 106 THR 107 VAL 108 VAL 109 THR 110 VAL 111 SER 112 PRO 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 GLY 135 GLY 136 THR 137 ALA 138 ALA 139 LEU 140 GLY 141 CYS 142 LEU 143 VAL 144 LYS 145 ASP 146 TYR 147 PHE 148 PRO 149 GLU 150 PRO 151 VAL 152 THR 153 VAL 154 SER 156 TRP 157 ASN 162 SER 163 GLY 164 ALA 165 LEU 166 THR 167 SER 168 GLY 169 VAL 171 HIS 172 THR 173 PHE 174 PRO 175 ALA 176 VAL 177 LEU 178 GLN 179 SER 180 SER 182 GLY 183 LEU 184 TYR 185 SER 186 LEU 187 SER 188 SER 189 VAL 190 VAL 191 THR 192 VAL 193 PRO 194 SER 195 SER 196 GLN 203 THR 205 TYR 206 ILE 207 CYS 208 ASN 209 VAL 210 ASN 211 HIS 212 LYS 213 PRO 214 SER 215 ASN 216 THR 217 LYS 218 VAL 219 ASP 220 LYS 221 LYS 222 VAL 225 GLU 226 PRO 227

Ligands

Unit 3	MAN 1 MAN 2 MAN 3 MAN 4
Unit 4	UNX 301
Unit 5	UNX 301 UNX 302 UNX 303 ACT 308