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Title | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING SITE I WITH 4'-DEOXY-4'-FLUORO NEAMINE ANALOG (AXIAL 4'-F) | |
Keywords | RNA, ANTIBIOTIC, RNA-ANTIBIOTIC COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 6JBF | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 23 | 487 | 0 | |
2 | RNA | B | 23 | 487 | 0 | |
3 | RNA | C | 23 | 487 | 0 | |
4 | RNA | D | 23 | 487 | 0 | |
5 | Ligand | RNA (5'- R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP C)-3') | B | 1 | 0 | 22 |
6 | Water | 95 | 0 | 95 | ||
total | 188 | 1948 | 117 |
Unit 1 | U1 U2 G3 C4 G5 U6 C7 A8 C9 G10 C11 C12 G13 G14 C15 G16 A17 A18 G19 U20 C21 G22 C23 |
Unit 2 | U24 U25 G26 C27 G28 U29 C30 A31 C32 G33 C34 C35 G36 G37 C38 G39 A40 A41 G42 U43 C44 G45 C46 |
Unit 3 | U47 U48 G49 C50 G51 U52 C53 A54 C55 G56 C57 C58 G59 G60 C61 G62 A63 A64 G65 U66 C67 G68 C69 |
Unit 4 | U70 U71 G72 C73 G74 U75 C76 A77 C78 G79 C80 C81 G82 G83 C84 G85 A86 A87 G88 U89 C90 G91 C92 |
Unit 5 | V71100 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |