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Sequence, Chains, Asymmetric and Biological Units

Title COMPLEX STRUCTURE OF LACTOBACILLUS CASEI LACTATE DEHYDROGENA MUTANT WITH PYRUVATE
Keywords OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   6J9U     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-LACTATE DEHYDROGENASE  A 306 2354 0
2  Protein   L-LACTATE DEHYDROGENASE  B 315 2422 0
3  Protein   L-LACTATE DEHYDROGENASE  C 315 2422 0
4  Protein   L-LACTATE DEHYDROGENASE  D 315 2422 0
5  Protein   L-LACTATE DEHYDROGENASE  E 315 2421 0
6  Protein   L-LACTATE DEHYDROGENASE  F 316 2427 0
7  Ligand   L-LACTATE DEHYDROGENASE  A 2 0 11
8  Ligand   L-LACTATE DEHYDROGENASE  B 2 0 10
9  Ligand   L-LACTATE DEHYDROGENASE  C 2 0 11
10  Ligand   L-LACTATE DEHYDROGENASE  D 2 0 11
11  Ligand   L-LACTATE DEHYDROGENASE  E 2 0 10
12  Ligand   L-LACTATE DEHYDROGENASE  F 2 0 10
13 Water     65 0 65
total       1959 14468 128
Proteins
Unit 1 ILE4 THR5 ASP6 LYS7 ASP8 HIS9 GLN10 LYS11 VAL12 ILE13 LEU14 VAL15 GLY16 ASP17 GLY18 ALA19 VAL20 GLY21 SER22 SER23 TYR24 ALA25 TYR26 ALA27 MET28 VAL29 LEU30 GLN31 GLY32 ILE33 ALA34 GLN35 GLU36 ILE37 GLY38 ILE39 VAL40 ASP41 ILE42 PHE43 LYS44 ASP45 LYS46 THR47 LYS48 GLY49 ASP50 ALA51 ILE52 ASP53 LEU54 GLU55 ASP56 ALA57 LEU58 PRO59 PHE60 THR61 SER62 PRO63 LYS64 LYS65 ILE66 TYR67 SER68 ALA69 GLU70 TYR71 SER72 ASP73 ALA74 LYS75 ASP76 ALA77 ASP78 LEU79 VAL80 VAL81 ILE82 THR83 ALA84 GLY85 ALA86 PRO87 THR93 ARG94 LEU95 ASP96 LEU97 VAL98 ASN99 LYS100 ASN101 LEU102 LYS103 ILE104 LEU105 LYS106 SER107 ILE108 VAL109 ASP110 PRO111 ILE112 VAL113 ASP114 SER115 GLY116 PHE117 ASN118 GLY119 ILE120 PHE121 LEU122 VAL123 ALA124 ALA125 ASN126 PRO127 VAL128 ASP129 ILE130 LEU131 THR132 TYR133 ALA134 THR135 TRP136 LYS137 LEU138 SER139 GLY140 PHE141 PRO142 LYS143 ASN144 ARG145 VAL146 VAL147 GLY148 SER149 GLY150 THR151 SER152 LEU153 ASP154 THR155 ALA156 ARG157 PHE158 ARG159 GLN160 SER161 ILE162 ALA163 LYS164 MET165 VAL166 ASN167 VAL168 ASP169 ALA170 ARG171 SER172 VAL173 HIS174 ALA175 TYR176 ILE177 MET178 GLY179 GLU180 HIS181 GLY182 ASP183 THR184 GLU185 PHE186 PRO187 VAL188 TRP189 SER190 HIS191 ALA192 ASN193 ILE194 GLY195 GLY196 VAL197 THR198 ILE199 ALA200 GLU201 TRP202 VAL203 LYS204 ALA205 HIS206 PRO207 GLU208 ILE209 LYS210 GLU211 ASP212 LYS213 LEU214 VAL215 LYS216 MET217 PHE218 GLU219 ASP220 VAL221 ARG222 ASN223 LYS224 ALA225 TYR226 GLU227 ILE228 ILE229 LYS230 LEU231 LYS232 GLY233 ALA234 THR235 PHE236 TYR237 GLY238 ILE239 ALA240 THR241 ALA242 LEU243 ALA244 ARG245 ILE246 SER247 LYS248 ALA249 ILE250 LEU251 ASN252 ASP253 GLU254 ASN255 ALA256 VAL257 LEU258 PRO259 LEU260 SER261 VAL262 TYR263 MET264 ASP265 GLY266 GLN267 TYR268 GLY269 LEU270 ASN271 ASP272 ILE273 TYR274 ILE275 GLY276 THR277 PRO278 ALA279 VAL280 ILE281 ASN282 ARG283 ASN284 GLY285 ILE286 GLN287 ASN288 ILE289 LEU290 GLU291 ILE292 PRO293 LEU294 THR295 ASP296 HIS297 GLU298 GLU299 GLU300 SER301 MET302 GLN303 LYS304 SER305 ALA306 SER307 GLN308 LEU309 LYS310 LYS311 VAL312 LEU313 THR314
Unit 2 SER3 ILE4 THR5 ASP6 LYS7 ASP8 HIS9 GLN10 LYS11 VAL12 ILE13 LEU14 VAL15 GLY16 ASP17 GLY18 ALA19 VAL20 GLY21 SER22 SER23 TYR24 ALA25 TYR26 ALA27 MET28 VAL29 LEU30 GLN31 GLY32 ILE33 ALA34 GLN35 GLU36 ILE37 GLY38 ILE39 VAL40 ASP41 ILE42 PHE43 LYS44 ASP45 LYS46 THR47 LYS48 GLY49 ASP50 ALA51 ILE52 ASP53 LEU54 GLU55 ASP56 ALA57 LEU58 PRO59 PHE60 THR61 SER62 PRO63 LYS64 LYS65 ILE66 TYR67 SER68 ALA69 GLU70 TYR71 SER72 ASP73 ALA74 LYS75 ASP76 ALA77 ASP78 LEU79 VAL80 VAL81 ILE82 THR83 ALA84 GLY85 ALA86 PRO87 GLN88 LYS89 PRO90 GLY91 GLU92 THR93 ARG94 LEU95 ASP96 LEU97 VAL98 ASN99 LYS100 ASN101 LEU102 LYS103 ILE104 LEU105 LYS106 SER107 ILE108 VAL109 ASP110 PRO111 ILE112 VAL113 ASP114 SER115 GLY116 PHE117 ASN118 GLY119 ILE120 PHE121 LEU122 VAL123 ALA124 ALA125 ASN126 PRO127 VAL128 ASP129 ILE130 LEU131 THR132 TYR133 ALA134 THR135 TRP136 LYS137 LEU138 SER139 GLY140 PHE141 PRO142 LYS143 ASN144 ARG145 VAL146 VAL147 GLY148 SER149 GLY150 THR151 SER152 LEU153 ASP154 THR155 ALA156 ARG157 PHE158 ARG159 GLN160 SER161 ILE162 ALA163 LYS164 MET165 VAL166 ASN167 VAL168 ASP169 ALA170 ARG171 SER172 VAL173 HIS174 ALA175 TYR176 ILE177 MET178 GLY179 GLU180 HIS181 GLY182 ASP183 THR184 GLU185 PHE186 PRO187 VAL188 TRP189 SER190 HIS191 ALA192 ASN193 ILE194 GLY195 GLY196 VAL197 THR198 ILE199 ALA200 GLU201 TRP202 VAL203 LYS204 ALA205 HIS206 PRO207 GLU208 ILE209 LYS210 GLU211 ASP212 LYS213 LEU214 VAL215 LYS216 MET217 PHE218 GLU219 ASP220 VAL221 ARG222 ASN223 LYS224 ALA225 TYR226 GLU227 ILE228 ILE229 LYS230 LEU231 LYS232 GLY233 ALA234 THR235 PHE236 TYR237 GLY238 ILE239 ALA240 THR241 ALA242 LEU243 ALA244 ARG245 ILE246 SER247 LYS248 ALA249 ILE250 LEU251 ASN252 ASP253 GLU254 ASN255 ALA256 VAL257 LEU258 PRO259 LEU260 SER261 VAL262 TYR263 MET264 ASP265 GLY266 GLN267 TYR268 GLY269 LEU270 ASN271 ASP272 ILE273 TYR274 ILE275 GLY276 THR277 PRO278 ALA279 VAL280 ILE281 ASN282 ARG283 ASN284 GLY285 ILE286 GLN287 ASN288 ILE289 LEU290 GLU291 ILE292 PRO293 LEU294 THR295 ASP296 HIS297 GLU298 GLU299 GLU300 SER301 MET302 GLN303 LYS304 SER305 ALA306 SER307 GLN308 LEU309 LYS310 LYS311 VAL312 LEU313 THR314 ASP315 ALA316 PHE317
Unit 3 SER3 ILE4 THR5 ASP6 LYS7 ASP8 HIS9 GLN10 LYS11 VAL12 ILE13 LEU14 VAL15 GLY16 ASP17 GLY18 ALA19 VAL20 GLY21 SER22 SER23 TYR24 ALA25 TYR26 ALA27 MET28 VAL29 LEU30 GLN31 GLY32 ILE33 ALA34 GLN35 GLU36 ILE37 GLY38 ILE39 VAL40 ASP41 ILE42 PHE43 LYS44 ASP45 LYS46 THR47 LYS48 GLY49 ASP50 ALA51 ILE52 ASP53 LEU54 GLU55 ASP56 ALA57 LEU58 PRO59 PHE60 THR61 SER62 PRO63 LYS64 LYS65 ILE66 TYR67 SER68 ALA69 GLU70 TYR71 SER72 ASP73 ALA74 LYS75 ASP76 ALA77 ASP78 LEU79 VAL80 VAL81 ILE82 THR83 ALA84 GLY85 ALA86 PRO87 GLN88 LYS89 PRO90 GLY91 GLU92 THR93 ARG94 LEU95 ASP96 LEU97 VAL98 ASN99 LYS100 ASN101 LEU102 LYS103 ILE104 LEU105 LYS106 SER107 ILE108 VAL109 ASP110 PRO111 ILE112 VAL113 ASP114 SER115 GLY116 PHE117 ASN118 GLY119 ILE120 PHE121 LEU122 VAL123 ALA124 ALA125 ASN126 PRO127 VAL128 ASP129 ILE130 LEU131 THR132 TYR133 ALA134 THR135 TRP136 LYS137 LEU138 SER139 GLY140 PHE141 PRO142 LYS143 ASN144 ARG145 VAL146 VAL147 GLY148 SER149 GLY150 THR151 SER152 LEU153 ASP154 THR155 ALA156 ARG157 PHE158 ARG159 GLN160 SER161 ILE162 ALA163 LYS164 MET165 VAL166 ASN167 VAL168 ASP169 ALA170 ARG171 SER172 VAL173 HIS174 ALA175 TYR176 ILE177 MET178 GLY179 GLU180 HIS181 GLY182 ASP183 THR184 GLU185 PHE186 PRO187 VAL188 TRP189 SER190 HIS191 ALA192 ASN193 ILE194 GLY195 GLY196 VAL197 THR198 ILE199 ALA200 GLU201 TRP202 VAL203 LYS204 ALA205 HIS206 PRO207 GLU208 ILE209 LYS210 GLU211 ASP212 LYS213 LEU214 VAL215 LYS216 MET217 PHE218 GLU219 ASP220 VAL221 ARG222 ASN223 LYS224 ALA225 TYR226 GLU227 ILE228 ILE229 LYS230 LEU231 LYS232 GLY233 ALA234 THR235 PHE236 TYR237 GLY238 ILE239 ALA240 THR241 ALA242 LEU243 ALA244 ARG245 ILE246 SER247 LYS248 ALA249 ILE250 LEU251 ASN252 ASP253 GLU254 ASN255 ALA256 VAL257 LEU258 PRO259 LEU260 SER261 VAL262 TYR263 MET264 ASP265 GLY266 GLN267 TYR268 GLY269 LEU270 ASN271 ASP272 ILE273 TYR274 ILE275 GLY276 THR277 PRO278 ALA279 VAL280 ILE281 ASN282 ARG283 ASN284 GLY285 ILE286 GLN287 ASN288 ILE289 LEU290 GLU291 ILE292 PRO293 LEU294 THR295 ASP296 HIS297 GLU298 GLU299 GLU300 SER301 MET302 GLN303 LYS304 SER305 ALA306 SER307 GLN308 LEU309 LYS310 LYS311 VAL312 LEU313 THR314 ASP315 ALA316 PHE317
Unit 4 SER3 ILE4 THR5 ASP6 LYS7 ASP8 HIS9 GLN10 LYS11 VAL12 ILE13 LEU14 VAL15 GLY16 ASP17 GLY18 ALA19 VAL20 GLY21 SER22 SER23 TYR24 ALA25 TYR26 ALA27 MET28 VAL29 LEU30 GLN31 GLY32 ILE33 ALA34 GLN35 GLU36 ILE37 GLY38 ILE39 VAL40 ASP41 ILE42 PHE43 LYS44 ASP45 LYS46 THR47 LYS48 GLY49 ASP50 ALA51 ILE52 ASP53 LEU54 GLU55 ASP56 ALA57 LEU58 PRO59 PHE60 THR61 SER62 PRO63 LYS64 LYS65 ILE66 TYR67 SER68 ALA69 GLU70 TYR71 SER72 ASP73 ALA74 LYS75 ASP76 ALA77 ASP78 LEU79 VAL80 VAL81 ILE82 THR83 ALA84 GLY85 ALA86 PRO87 GLN88 LYS89 PRO90 GLY91 GLU92 THR93 ARG94 LEU95 ASP96 LEU97 VAL98 ASN99 LYS100 ASN101 LEU102 LYS103 ILE104 LEU105 LYS106 SER107 ILE108 VAL109 ASP110 PRO111 ILE112 VAL113 ASP114 SER115 GLY116 PHE117 ASN118 GLY119 ILE120 PHE121 LEU122 VAL123 ALA124 ALA125 ASN126 PRO127 VAL128 ASP129 ILE130 LEU131 THR132 TYR133 ALA134 THR135 TRP136 LYS137 LEU138 SER139 GLY140 PHE141 PRO142 LYS143 ASN144 ARG145 VAL146 VAL147 GLY148 SER149 GLY150 THR151 SER152 LEU153 ASP154 THR155 ALA156 ARG157 PHE158 ARG159 GLN160 SER161 ILE162 ALA163 LYS164 MET165 VAL166 ASN167 VAL168 ASP169 ALA170 ARG171 SER172 VAL173 HIS174 ALA175 TYR176 ILE177 MET178 GLY179 GLU180 HIS181 GLY182 ASP183 THR184 GLU185 PHE186 PRO187 VAL188 TRP189 SER190 HIS191 ALA192 ASN193 ILE194 GLY195 GLY196 VAL197 THR198 ILE199 ALA200 GLU201 TRP202 VAL203 LYS204 ALA205 HIS206 PRO207 GLU208 ILE209 LYS210 GLU211 ASP212 LYS213 LEU214 VAL215 LYS216 MET217 PHE218 GLU219 ASP220 VAL221 ARG222 ASN223 LYS224 ALA225 TYR226 GLU227 ILE228 ILE229 LYS230 LEU231 LYS232 GLY233 ALA234 THR235 PHE236 TYR237 GLY238 ILE239 ALA240 THR241 ALA242 LEU243 ALA244 ARG245 ILE246 SER247 LYS248 ALA249 ILE250 LEU251 ASN252 ASP253 GLU254 ASN255 ALA256 VAL257 LEU258 PRO259 LEU260 SER261 VAL262 TYR263 MET264 ASP265 GLY266 GLN267 TYR268 GLY269 LEU270 ASN271 ASP272 ILE273 TYR274 ILE275 GLY276 THR277 PRO278 ALA279 VAL280 ILE281 ASN282 ARG283 ASN284 GLY285 ILE286 GLN287 ASN288 ILE289 LEU290 GLU291 ILE292 PRO293 LEU294 THR295 ASP296 HIS297 GLU298 GLU299 GLU300 SER301 MET302 GLN303 LYS304 SER305 ALA306 SER307 GLN308 LEU309 LYS310 LYS311 VAL312 LEU313 THR314 ASP315 ALA316 PHE317
Unit 5 ILE4 THR5 ASP6 LYS7 ASP8 HIS9 GLN10 LYS11 VAL12 ILE13 LEU14 VAL15 GLY16 ASP17 GLY18 ALA19 VAL20 GLY21 SER22 SER23 TYR24 ALA25 TYR26 ALA27 MET28 VAL29 LEU30 GLN31 GLY32 ILE33 ALA34 GLN35 GLU36 ILE37 GLY38 ILE39 VAL40 ASP41 ILE42 PHE43 LYS44 ASP45 LYS46 THR47 LYS48 GLY49 ASP50 ALA51 ILE52 ASP53 LEU54 GLU55 ASP56 ALA57 LEU58 PRO59 PHE60 THR61 SER62 PRO63 LYS64 LYS65 ILE66 TYR67 SER68 ALA69 GLU70 TYR71 SER72 ASP73 ALA74 LYS75 ASP76 ALA77 ASP78 LEU79 VAL80 VAL81 ILE82 THR83 ALA84 GLY85 ALA86 PRO87 GLN88 LYS89 PRO90 GLY91 GLU92 THR93 ARG94 LEU95 ASP96 LEU97 VAL98 ASN99 LYS100 ASN101 LEU102 LYS103 ILE104 LEU105 LYS106 SER107 ILE108 VAL109 ASP110 PRO111 ILE112 VAL113 ASP114 SER115 GLY116 PHE117 ASN118 GLY119 ILE120 PHE121 LEU122 VAL123 ALA124 ALA125 ASN126 PRO127 VAL128 ASP129 ILE130 LEU131 THR132 TYR133 ALA134 THR135 TRP136 LYS137 LEU138 SER139 GLY140 PHE141 PRO142 LYS143 ASN144 ARG145 VAL146 VAL147 GLY148 SER149 GLY150 THR151 SER152 LEU153 ASP154 THR155 ALA156 ARG157 PHE158 ARG159 GLN160 SER161 ILE162 ALA163 LYS164 MET165 VAL166 ASN167 VAL168 ASP169 ALA170 ARG171 SER172 VAL173 HIS174 ALA175 TYR176 ILE177 MET178 GLY179 GLU180 HIS181 GLY182 ASP183 THR184 GLU185 PHE186 PRO187 VAL188 TRP189 SER190 HIS191 ALA192 ASN193 ILE194 GLY195 GLY196 VAL197 THR198 ILE199 ALA200 GLU201 TRP202 VAL203 LYS204 ALA205 HIS206 PRO207 GLU208 ILE209 LYS210 GLU211 ASP212 LYS213 LEU214 VAL215 LYS216 MET217 PHE218 GLU219 ASP220 VAL221 ARG222 ASN223 LYS224 ALA225 TYR226 GLU227 ILE228 ILE229 LYS230 LEU231 LYS232 GLY233 ALA234 THR235 PHE236 TYR237 GLY238 ILE239 ALA240 THR241 ALA242 LEU243 ALA244 ARG245 ILE246 SER247 LYS248 ALA249 ILE250 LEU251 ASN252 ASP253 GLU254 ASN255 ALA256 VAL257 LEU258 PRO259 LEU260 SER261 VAL262 TYR263 MET264 ASP265 GLY266 GLN267 TYR268 GLY269 LEU270 ASN271 ASP272 ILE273 TYR274 ILE275 GLY276 THR277 PRO278 ALA279 VAL280 ILE281 ASN282 ARG283 ASN284 GLY285 ILE286 GLN287 ASN288 ILE289 LEU290 GLU291 ILE292 PRO293 LEU294 THR295 ASP296 HIS297 GLU298 GLU299 GLU300 SER301 MET302 GLN303 LYS304 SER305 ALA306 SER307 GLN308 LEU309 LYS310 LYS311 VAL312 LEU313 THR314 ASP315 ALA316 PHE317 ALA318
Unit 6 SER3 ILE4 THR5 ASP6 LYS7 ASP8 HIS9 GLN10 LYS11 VAL12 ILE13 LEU14 VAL15 GLY16 ASP17 GLY18 ALA19 VAL20 GLY21 SER22 SER23 TYR24 ALA25 TYR26 ALA27 MET28 VAL29 LEU30 GLN31 GLY32 ILE33 ALA34 GLN35 GLU36 ILE37 GLY38 ILE39 VAL40 ASP41 ILE42 PHE43 LYS44 ASP45 LYS46 THR47 LYS48 GLY49 ASP50 ALA51 ILE52 ASP53 LEU54 GLU55 ASP56 ALA57 LEU58 PRO59 PHE60 THR61 SER62 PRO63 LYS64 LYS65 ILE66 TYR67 SER68 ALA69 GLU70 TYR71 SER72 ASP73 ALA74 LYS75 ASP76 ALA77 ASP78 LEU79 VAL80 VAL81 ILE82 THR83 ALA84 GLY85 ALA86 PRO87 GLN88 LYS89 PRO90 GLY91 GLU92 THR93 ARG94 LEU95 ASP96 LEU97 VAL98 ASN99 LYS100 ASN101 LEU102 LYS103 ILE104 LEU105 LYS106 SER107 ILE108 VAL109 ASP110 PRO111 ILE112 VAL113 ASP114 SER115 GLY116 PHE117 ASN118 GLY119 ILE120 PHE121 LEU122 VAL123 ALA124 ALA125 ASN126 PRO127 VAL128 ASP129 ILE130 LEU131 THR132 TYR133 ALA134 THR135 TRP136 LYS137 LEU138 SER139 GLY140 PHE141 PRO142 LYS143 ASN144 ARG145 VAL146 VAL147 GLY148 SER149 GLY150 THR151 SER152 LEU153 ASP154 THR155 ALA156 ARG157 PHE158 ARG159 GLN160 SER161 ILE162 ALA163 LYS164 MET165 VAL166 ASN167 VAL168 ASP169 ALA170 ARG171 SER172 VAL173 HIS174 ALA175 TYR176 ILE177 MET178 GLY179 GLU180 HIS181 GLY182 ASP183 THR184 GLU185 PHE186 PRO187 VAL188 TRP189 SER190 HIS191 ALA192 ASN193 ILE194 GLY195 GLY196 VAL197 THR198 ILE199 ALA200 GLU201 TRP202 VAL203 LYS204 ALA205 HIS206 PRO207 GLU208 ILE209 LYS210 GLU211 ASP212 LYS213 LEU214 VAL215 LYS216 MET217 PHE218 GLU219 ASP220 VAL221 ARG222 ASN223 LYS224 ALA225 TYR226 GLU227 ILE228 ILE229 LYS230 LEU231 LYS232 GLY233 ALA234 THR235 PHE236 TYR237 GLY238 ILE239 ALA240 THR241 ALA242 LEU243 ALA244 ARG245 ILE246 SER247 LYS248 ALA249 ILE250 LEU251 ASN252 ASP253 GLU254 ASN255 ALA256 VAL257 LEU258 PRO259 LEU260 SER261 VAL262 TYR263 MET264 ASP265 GLY266 GLN267 TYR268 GLY269 LEU270 ASN271 ASP272 ILE273 TYR274 ILE275 GLY276 THR277 PRO278 ALA279 VAL280 ILE281 ASN282 ARG283 ASN284 GLY285 ILE286 GLN287 ASN288 ILE289 LEU290 GLU291 ILE292 PRO293 LEU294 THR295 ASP296 HIS297 GLU298 GLU299 GLU300 SER301 MET302 GLN303 LYS304 SER305 ALA306 SER307 GLN308 LEU309 LYS310 LYS311 VAL312 LEU313 THR314 ASP315 ALA316 PHE317 ALA318
Ligands
Unit 7 PYR401 SO4402
Unit 8 SO4401 SO4402
Unit 9 PYR401 SO4402
Unit 10 PYR401 SO4402
Unit 11 SO4401 SO4402
Unit 12 SO4401 SO4402
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany