6EO6 - Sequence, Chains, Asymmetric and Biological Units

• Title: X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA-THROMBIN MODIFIED 15-MER DNA APTAMER CONTAINING 5-(3-(2-(1H-INDOL-3- ACETAMIDE-N-YL)-1-PROPEN-1-YL)-2'-DEOXYURIDINE RESIDUE
• Keywords: ALPHA THROMBIN, APTAMER, THROMBIN-MTBA, COMPLEX, HYDROLASE-D COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	6EO6	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Other macromolecule	GA63A - TBA MODIFIED APTAMER	D	15	295	35
2	Protein	PROTHROMBIN	L	29	239	0
3	Protein	PROTHROMBIN	H	259	2093	0
4	Ligand	GA63A - TBA MODIFIED APTAMER	D	1	0	1
5	Ligand	PROTHROMBIN	H	3	0	45
6	Water			412	0	412
total				719	2627	493

Proteins

Unit 2

GLU 333 ALA 334 ASP 335 CYS 336 GLY 337 LEU 338 ARG 339 PRO 340 LEU 341 PHE 342 GLU 343 LYS 344 LYS 345 SER 346 LEU 347 GLU 348 ASP 349 LYS 350 THR 351 GLU 352 ARG 353 GLU 354 LEU 355 LEU 356 GLU 357 SER 358 TYR 359 ILE 360 ASP 361

Unit 3

ILE 364 VAL 365 GLU 366 GLY 367 SER 368 ASP 369 ALA 370 GLU 371 ILE 372 GLY 373 MET 374 SER 375 PRO 376 TRP 377 GLN 378 VAL 379 MET 380 LEU 381 PHE 382 ARG 383 LYS 384 SER 385 PRO 386 GLN 387 GLU 388 LEU 389 LEU 390 CYS 391 GLY 392 ALA 393 SER 394 LEU 395 ILE 396 SER 397 ASP 398 ARG 399 TRP 400 VAL 401 LEU 402 THR 403 ALA 404 ALA 405 HIS 406 CYS 407 LEU 408 LEU 409 TYR 410 PRO 411 PRO 412 TRP 413 ASP 414 LYS 415 ASN 416 PHE 417 THR 418 GLU 419 ASN 420 ASP 421 LEU 422 LEU 423 VAL 424 ARG 425 ILE 426 GLY 427 LYS 428 HIS 429 SER 430 ARG 431 THR 432 ARG 433 TYR 434 GLU 435 ARG 436 ASN 437 ILE 438 GLU 439 LYS 440 ILE 441 SER 442 MET 443 LEU 444 GLU 445 LYS 446 ILE 447 TYR 448 ILE 449 HIS 450 PRO 451 ARG 452 TYR 453 ASN 454 TRP 455 ARG 456 GLU 457 ASN 458 LEU 459 ASP 460 ARG 461 ASP 462 ILE 463 ALA 464 LEU 465 MET 466 LYS 467 LEU 468 LYS 469 LYS 470 PRO 471 VAL 472 ALA 473 PHE 474 SER 475 ASP 476 TYR 477 ILE 478 HIS 479 PRO 480 VAL 481 CYS 482 LEU 483 PRO 484 ASP 485 ARG 486 GLU 487 THR 488 ALA 489 ALA 490 SER 491 LEU 492 LEU 493 GLN 494 ALA 495 GLY 496 TYR 497 LYS 498 GLY 499 ARG 500 VAL 501 THR 502 GLY 503 TRP 504 GLY 505 ASN 506 LEU 507 LYS 508 GLU 509 THR 510 TRP 511 THR 512 ALA 513 ASN 514 VAL 515 GLY 516 LYS 517 GLY 518 GLN 519 PRO 520 SER 521 VAL 522 LEU 523 GLN 524 VAL 525 VAL 526 ASN 527 LEU 528 PRO 529 ILE 530 VAL 531 GLU 532 ARG 533 PRO 534 VAL 535 CYS 536 LYS 537 ASP 538 SER 539 THR 540 ARG 541 ILE 542 ARG 543 ILE 544 THR 545 ASP 546 ASN 547 MET 548 PHE 549 CYS 550 ALA 551 GLY 552 TYR 553 LYS 554 PRO 555 ASP 556 GLU 557 GLY 558 LYS 559 ARG 560 GLY 561 ASP 562 ALA 563 CYS 564 GLU 565 GLY 566 ASP 567 SER 568 GLY 569 GLY 570 PRO 571 PHE 572 VAL 573 MET 574 LYS 575 SER 576 PRO 577 PHE 578 ASN 579 ASN 580 ARG 581 TRP 582 TYR 583 GLN 584 MET 585 GLY 586 ILE 587 VAL 588 SER 589 TRP 590 GLY 591 GLU 592 GLY 593 CYS 594 ASP 595 ARG 596 ASP 597 GLY 598 LYS 599 TYR 600 GLY 601 PHE 602 TYR 603 THR 604 HIS 605 VAL 606 PHE 607 ARG 608 LEU 609 LYS 610 LYS 611 TRP 612 ILE 613 GLN 614 LYS 615 VAL 616 ILE 617 ASP 618 GLN 619 PHE 620 GLY 621 GLU 622

Other macromolecules

Unit 1

DG 401 DG 402 DT 403 77Y 404 DG 405 DG 406 DT 407 DG 408 DT 409 DG 410 DG 411 DT 412 DT 413 DG 414 DG 415

Ligands

Unit 4	K 501
Unit 5	0G6 701 NA 702 NAG 703