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Sequence, Chains, Asymmetric and Biological Units

Title CRYO-EM STRUCTURE FOR HEPATITIS A VIRUS EMPTY PARTICLE
Keywords HAV, NEUTRALIZING MECHANISM, RECEPTOR RECOGNITION, VIRAL ENT
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5WTF     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   VP1  A 224 1777 0
2  Protein   VP0  B 203 1610 0
3  Protein   VP3  C 246 1956 0
total       673 5343 0

Proteins
Unit 1 VAL49 GLY50 ALA51 ILE52 THR53 THR54 ILE55 GLU56 ASP57 PRO58 VAL59 LEU60 ALA61 LYS62 LYS63 VAL64 PRO65 GLU66 THR67 PHE68 PRO69 GLU70 LEU71 LYS72 PRO73 GLY74 GLU75 SER76 ARG77 HIS78 THR79 SER80 ASP81 HIS82 MET83 SER84 ILE85 TYR86 LYS87 PHE88 MET89 GLY90 ARG91 SER92 HIS93 PHE94 LEU95 CYS96 THR97 PHE98 THR99 PHE100 ASN101 SER102 ASN103 ASN104 LYS105 GLU106 TYR107 THR108 PHE109 PRO110 ILE111 THR112 LEU113 SER114 SER115 THR116 SER117 ASN118 PRO119 PRO120 HIS121 GLY122 LEU123 PRO124 SER125 THR126 LEU127 ARG128 TRP129 PHE130 PHE131 ASN132 LEU133 PHE134 GLN135 LEU136 TYR137 ARG138 GLY139 PRO140 LEU141 ASP142 LEU143 THR144 ILE145 ILE146 ILE147 THR148 GLY149 ALA150 THR151 ASP152 VAL153 ASP154 GLY155 MET156 ALA157 TRP158 PHE159 THR160 PRO161 VAL162 GLY163 LEU164 ALA165 VAL166 ASP167 THR168 PRO169 TRP170 VAL171 GLU172 LYS173 GLU174 SER175 ALA176 LEU177 GLN178 ILE179 ASP180 TYR181 LYS182 THR183 ALA184 LEU185 GLY186 ALA187 VAL188 ARG189 PHE190 ASN191 THR192 ARG193 ARG194 THR195 GLY196 ASN197 ILE198 GLN199 ILE200 ARG201 LEU202 PRO203 TRP204 TYR205 SER206 TYR207 LEU208 TYR209 ALA210 VAL211 SER212 GLY213 ALA214 LEU215 ASP216 GLY217 LEU218 GLY219 ASP220 LYS221 THR222 ASP223 SER224 THR225 PHE226 GLY227 LEU228 VAL229 SER230 ILE231 GLN232 ILE233 ALA234 ASN235 TYR236 ASN237 HIS238 SER239 ASP240 GLU241 TYR242 LEU243 SER244 PHE245 SER246 CYS247 TYR248 LEU249 SER250 VAL251 THR252 GLU253 GLN254 SER255 GLU256 PHE257 TYR258 PHE259 PRO260 ARG261 ALA262 PRO263 LEU264 ASN265 SER266 ASN267 ALA268 MET269 LEU270 SER271 THR272
Unit 2 ALA19 SER20 TYR21 PHE22 THR23 SER24 VAL25 ASP26 GLN27 SER28 SER29 VAL30 HIS31 THR32 ALA33 GLU34 VAL35 GLY36 SER37 HIS38 GLN39 ILE40 GLU41 PRO42 LEU43 LYS44 THR45 SER46 VAL47 ASP48 LYS49 PRO50 GLY51 SER52 LYS53 LYS54 THR55 GLN56 GLY57 GLU58 LYS59 PHE60 PHE61 LEU62 ILE63 HIS64 SER65 ALA66 ARG67 TRP68 LEU69 THR70 THR71 HIS72 ALA73 LEU74 PHE75 HIS76 GLU77 VAL78 ALA79 LYS80 LEU81 ASP82 VAL83 VAL84 LYS85 LEU86 LEU87 TYR88 ASN89 GLU90 GLN91 PHE92 ALA93 VAL94 GLN95 GLY96 LEU97 LEU98 ARG99 TYR100 HIS101 THR102 TYR103 ALA104 ARG105 PHE106 GLY107 ILE108 GLU109 ILE110 GLN111 VAL112 GLN113 ILE114 ASN115 PRO116 THR117 PRO118 PHE119 GLN120 GLN121 GLY122 GLY123 LEU124 ILE125 CYS126 ALA127 MET128 VAL129 PRO130 GLY131 ASP132 GLN133 SER134 TYR135 GLY136 SER137 ILE138 ALA139 SER140 LEU141 THR142 VAL143 TYR144 PRO145 HIS146 GLY147 LEU148 LEU149 ASN150 CYS151 ASN152 ILE153 ASN154 ASN155 VAL156 VAL157 ARG158 ILE159 LYS160 VAL161 PRO162 PHE163 ILE164 TYR165 THR166 ARG167 GLY168 ALA169 TYR170 HIS171 PHE172 LYS173 ASP174 PRO175 GLN176 TYR177 PRO178 VAL179 TRP180 GLU181 LEU182 THR183 ILE184 ARG185 VAL186 TRP187 SER188 GLU189 LEU190 ASN191 ILE192 GLY193 THR194 GLY195 THR196 SER197 ALA198 TYR199 THR200 SER201 LEU202 ASN203 VAL204 LEU205 ALA206 ARG207 PHE208 THR209 ASP210 LEU211 GLU212 LEU213 HIS214 GLY215 LEU216 THR217 PRO218 LEU219 SER220 THR221
Unit 3 MET1 MET2 ARG3 ASN4 GLU5 THR6 ARG7 VAL8 SER9 THR10 THR11 GLU12 ASN13 VAL14 VAL15 ASN16 LEU17 SER18 ASN19 TYR20 GLU21 ASP22 ALA23 ARG24 ALA25 LYS26 MET27 SER28 PHE29 ALA30 LEU31 ASP32 GLN33 GLU34 ASP35 TRP36 LYS37 SER38 ASP39 PRO40 SER41 GLN42 GLY43 GLY44 GLY45 ILE46 LYS47 ILE48 THR49 HIS50 PHE51 THR52 THR53 TRP54 THR55 SER56 ILE57 PRO58 THR59 LEU60 ALA61 ALA62 GLN63 PHE64 PRO65 PHE66 ASN67 ALA68 SER69 ASP70 SER71 VAL72 GLY73 GLN74 GLN75 ILE76 LYS77 VAL78 ILE79 PRO80 VAL81 ASP82 PRO83 TYR84 PHE85 PHE86 GLN87 MET88 THR89 ASN90 THR91 ASN92 PRO93 ASP94 GLN95 LYS96 CYS97 ILE98 THR99 ALA100 LEU101 ALA102 SER103 ILE104 CYS105 GLN106 MET107 PHE108 CYS109 PHE110 TRP111 ARG112 GLY113 ASP114 LEU115 VAL116 PHE117 ASP118 PHE119 GLN120 VAL121 PHE122 PRO123 THR124 LYS125 TYR126 HIS127 SER128 GLY129 ARG130 LEU131 LEU132 PHE133 CYS134 PHE135 VAL136 PRO137 GLY138 ASN139 GLU140 LEU141 ILE142 ASP143 VAL144 THR145 GLY146 ILE147 THR148 LEU149 LYS150 GLN151 ALA152 THR153 THR154 ALA155 PRO156 CYS157 ALA158 VAL159 MET160 ASP161 ILE162 ALA163 GLY164 VAL165 GLN166 SER167 THR168 LEU169 ARG170 PHE171 ARG172 VAL173 PRO174 TRP175 ILE176 SER177 ASP178 THR179 PRO180 TYR181 ARG182 VAL183 ASN184 ARG185 TYR186 THR187 LYS188 GLU189 ALA190 HIS191 GLN192 LYS193 GLY194 GLU195 TYR196 THR197 ALA198 ILE199 GLY200 LYS201 LEU202 ILE203 VAL204 TYR205 CYS206 TYR207 ASN208 ARG209 LEU210 THR211 SER212 PRO213 SER214 ASN215 VAL216 ALA217 HIS218 HIS219 VAL220 ARG221 VAL222 ASN223 VAL224 TYR225 LEU226 SER227 ALA228 ILE229 ASN230 LEU231 GLU232 CYS233 PHE234 ALA235 PRO236 LEU237 TYR238 HIS239 ALA240 MET241 ASP242 VAL243 THR244 THR245 GLN246

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany