5VYB - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE CARBOHYDRATE RECOGNITION DOMAIN OF DECTIN-2 WITH A MAMMALIAN-TYPE HIGH MANNOSE MAN9GLCNAC2 OLIGOSACCHAR
• Keywords: CARBOHYDRATE-BINDING PROTEIN; LECTIN; GLYCOPROTEIN, SUGAR BI PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5VYB	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	C-TYPE LECTIN DOMAIN FAMILY 6 MEMBER A	A	143	1162	0
2	Ligand		B	7	0	78
3	Ligand	C-TYPE LECTIN DOMAIN FAMILY 6 MEMBER A	A	4	0	10
4	Water			19	0	19
total				173	1162	107

Proteins

Unit 1

ALA 63 LEU 64 THR 65 CYS 66 PHE 67 SER 68 GLU 69 GLY 70 ALA 75 TRP 76 GLY 77 CYS 78 CYS 79 PRO 80 ALA 81 SER 82 TRP 83 LYS 84 SER 85 PHE 86 GLY 87 SER 88 SER 89 CYS 90 TYR 91 PHE 92 ILE 93 SER 94 SER 95 GLU 96 GLU 97 LYS 98 VAL 99 TRP 100 SER 101 LYS 102 SER 103 GLU 104 GLN 105 ASN 106 CYS 107 VAL 108 GLU 109 MET 110 GLY 111 ALA 112 HIS 113 LEU 114 VAL 115 VAL 116 PHE 117 ASN 118 THR 119 GLU 120 ALA 121 GLU 122 GLN 123 ASN 124 PHE 125 ILE 126 VAL 127 GLN 128 GLN 129 LEU 130 ASN 131 GLU 132 SER 133 PHE 134 SER 135 TYR 136 PHE 137 LEU 138 GLY 139 LEU 140 SER 141 ASP 142 PRO 143 GLN 144 GLY 145 ASN 146 ASN 147 ASN 148 TRP 149 GLN 150 TRP 151 ILE 152 ASP 153 LYS 154 THR 155 PRO 156 TYR 157 GLU 158 LYS 159 ASN 160 VAL 161 ARG 162 PHE 163 TRP 164 HIS 165 LEU 166 GLY 167 GLU 168 PRO 169 ASN 170 HIS 171 SER 172 ALA 173 GLU 174 GLN 175 CYS 176 ALA 177 SER 178 ILE 179 VAL 180 PHE 181 TRP 182 LYS 183 PRO 184 THR 185 GLY 186 TRP 187 GLY 188 TRP 189 ASN 190 ASP 191 VAL 192 ILE 193 CYS 194 GLU 195 THR 196 ARG 197 ARG 198 ASN 199 SER 200 ILE 201 CYS 202 GLU 203 MET 204 ASN 205 LYS 206 ILE 207 TYR 208 LEU 209

Ligands

Unit 2	BMA 1 MAN 2 MAN 3 MAN 4 MAN 5 MAN 6 MAN 7
Unit 3	CA 308 CA 309 NA 310 PEG 311