5VPG - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF DER P 1 COMPLEXED WITH FAB 4C1
• Keywords: ALLERGEN-ANTIBODY COMPLEX, HYDROLASE-IMMUNE SYSTEM COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5VPG	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DER P 1 ALLERGEN	A	222	1759	0
2	Protein	FAB 4C1 - LIGHT CHAIN	C	211	1655	0
3	Protein	FAB 4C1 - HEAVY CHAIN	D	218	1671	0
4	Ligand	DER P 1 ALLERGEN	A	7	0	35
5	Ligand	FAB 4C1 - LIGHT CHAIN	C	3	0	12
6	Water			429	0	429
total				1090	5085	476

Proteins

Unit 1	THR 1 ASN 2 ALA 3 CYS 4 SER 5 ILE 6 ASN 7 GLY 8 ASN 9 ALA 10 PRO 11 ALA 12 GLU 13 ILE 14 ASP 15 LEU 16 ARG 17 GLN 18 MET 19 ARG 20 THR 21 VAL 22 THR 23 PRO 24 ILE 25 ARG 26 MET 27 GLN 28 GLY 29 GLY 30 CYS 31 GLY 32 SER 33 CYS 34 TRP 35 ALA 36 PHE 37 SER 38 GLY 39 VAL 40 ALA 41 ALA 42 THR 43 GLU 44 SER 45 ALA 46 TYR 47 LEU 48 ALA 49 TYR 50 ARG 51 ASN 52 GLN 53 SER 54 LEU 55 ASP 56 LEU 57 ALA 58 GLU 59 GLN 60 GLU 61 LEU 62 VAL 63 ASP 64 CYS 65 ALA 66 SER 67 GLN 68 HIS 69 GLY 70 CYS 71 HIS 72 GLY 73 ASP 74 THR 75 ILE 76 PRO 77 ARG 78 GLY 79 ILE 80 GLU 81 TYR 82 ILE 83 GLN 84 HIS 85 ASN 86 GLY 87 VAL 88 VAL 89 GLN 90 GLU 91 SER 92 TYR 93 TYR 94 ARG 95 TYR 96 VAL 97 ALA 98 ARG 99 GLU 100 GLN 101 SER 102 CYS 103 ARG 104 ARG 105 PRO 106 ASN 107 ALA 108 GLN 109 ARG 110 PHE 111 GLY 112 ILE 113 SER 114 ASN 115 TYR 116 CYS 117 GLN 118 ILE 119 TYR 120 PRO 121 PRO 122 ASN 123 ALA 124 ASN 125 LYS 126 ILE 127 ARG 128 GLU 129 ALA 130 LEU 131 ALA 132 GLN 133 THR 134 HIS 135 SER 136 ALA 137 ILE 138 ALA 139 VAL 140 ILE 141 ILE 142 GLY 143 ILE 144 LYS 145 ASP 146 LEU 147 ASP 148 ALA 149 PHE 150 ARG 151 HIS 152 TYR 153 ASP 154 GLY 155 ARG 156 THR 157 ILE 158 ILE 159 GLN 160 ARG 161 ASP 162 ASN 163 GLY 164 TYR 165 GLN 166 PRO 167 ASN 168 TYR 169 HIS 170 ALA 171 VAL 172 ASN 173 ILE 174 VAL 175 GLY 176 TYR 177 SER 178 ASN 179 ALA 180 GLN 181 GLY 182 VAL 183 ASP 184 TYR 185 TRP 186 ILE 187 VAL 188 ARG 189 ASN 190 SER 191 TRP 192 ASP 193 THR 194 ASN 195 TRP 196 GLY 197 ASP 198 ASN 199 GLY 200 TYR 201 GLY 202 TYR 203 PHE 204 ALA 205 ALA 206 ASN 207 ILE 208 ASP 209 LEU 210 MET 211 MET 212 ILE 213 GLU 214 GLU 215 TYR 216 PRO 217 TYR 218 VAL 219 VAL 220 ILE 221 LEU 222
Unit 2	GLN 1 ILE 2 VAL 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 PHE 9 SER 10 MET 11 TYR 12 ALA 13 THR 14 LEU 15 GLY 16 GLU 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 LYS 24 ALA 25 SER 26 GLN 27 ASP 28 ILE 29 TYR 30 SER 31 TYR 32 LEU 33 SER 34 TRP 35 LEU 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 SER 43 LEU 44 LYS 45 THR 46 LEU 47 ILE 48 TYR 49 ARG 50 ALA 51 ASN 52 ARG 53 LEU 54 ILE 55 THR 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 GLN 69 ASP 70 TYR 71 SER 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLU 79 TYR 80 GLU 81 ASP 82 MET 83 GLY 84 ILE 85 TYR 86 TYR 87 CYS 88 LEU 89 GLN 90 TYR 91 ASP 92 GLU 93 PHE 94 PRO 95 TYR 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 MET 106 LYS 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 GLU 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 ARG 188 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 HIS 198 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211
Unit 3	GLU 1 VAL 2 GLN 3 LEU 4 GLN 5 GLU 6 SER 7 GLY 8 PRO 9 GLY 10 LEU 11 VAL 12 LYS 13 PRO 14 SER 15 GLN 16 SER 17 LEU 18 SER 19 LEU 20 THR 21 CYS 22 THR 23 VAL 24 THR 25 GLY 26 TYR 27 SER 28 ILE 29 THR 30 SER 31 ASP 32 TYR 33 ALA 34 TRP 35 ASN 36 TRP 37 ILE 38 ARG 39 GLN 40 PHE 41 PRO 42 GLY 43 ASN 44 LYS 45 LEU 46 GLU 47 TRP 48 MET 49 GLY 50 TYR 51 ILE 52 SER 53 TYR 54 SER 55 GLY 56 THR 57 THR 58 SER 59 TYR 60 ASN 61 PRO 62 SER 63 LEU 64 LYS 65 SER 66 ARG 67 ILE 68 SER 69 ILE 70 THR 71 ARG 72 ASP 73 THR 74 SER 75 LYS 76 ASN 77 GLN 78 PHE 79 PHE 80 LEU 81 GLN 82 LEU 83 ASN 84 SER 85 VAL 86 THR 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 THR 93 TYR 94 TYR 95 CYS 96 GLY 97 ARG 98 THR 99 GLY 100 VAL 101 TYR 102 ARG 103 TYR 104 PRO 105 GLU 106 ARG 107 ALA 108 PRO 109 TYR 110 TRP 111 GLY 112 GLN 113 GLY 114 THR 115 LEU 116 VAL 117 THR 118 VAL 119 SER 120 ALA 121 ALA 122 LYS 123 THR 124 THR 125 PRO 126 PRO 127 SER 128 VAL 129 TYR 130 PRO 131 LEU 132 ALA 133 PRO 134 GLN 139 THR 140 ASN 141 SER 142 MET 143 VAL 144 THR 145 LEU 146 GLY 147 CYS 148 LEU 149 VAL 150 LYS 151 GLY 152 TYR 153 PHE 154 PRO 155 GLU 156 PRO 157 VAL 158 THR 159 VAL 160 THR 161 TRP 162 ASN 163 SER 164 GLY 165 SER 166 LEU 167 SER 168 SER 169 GLY 170 VAL 171 HIS 172 THR 173 PHE 174 PRO 175 ALA 176 VAL 177 LEU 178 GLN 179 SER 180 ASP 181 LEU 182 TYR 183 THR 184 LEU 185 SER 186 SER 187 SER 188 VAL 189 THR 190 VAL 191 PRO 192 SER 193 SER 194 THR 195 TRP 196 PRO 197 SER 198 GLU 199 THR 200 VAL 201 THR 202 CYS 203 ASN 204 VAL 205 ALA 206 HIS 207 PRO 208 ALA 209 SER 210 SER 211 THR 212 LYS 213 VAL 214 ASP 215 LYS 216 LYS 217 ILE 218 VAL 219 PRO 220 ARG 221 ASP 222

Ligands

Unit 4	CA 301 EDO 302 EDO 303 EDO 304 EDO 305 EDO 306 NAG 307
Unit 5	EDO 301 EDO 302 EDO 303