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Sequence, Chains, Asymmetric and Biological Units

Title CRYO-EM MODEL OF B41 SOSIP.664 IN COMPLEX WITH SOLUBLE CD4 ( FRAGMENT ANTIGEN BINDING VARIABLE DOMAIN OF 17B
Keywords VIRAL FUSION, HIV-1, ENVELOPE GLYCOPROTEIN, CD4 RECEPTOR BIN IMMUNE SYSTEM
Experiment ELECTRON MICROSCOPY
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5VN3     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   17B FAB LIGHT CHAIN  L 110 849 0
2  Protein   ENVELOPE GLYCOPROTEIN GP160  A 136 1090 0
3  Protein   ENVELOPE GLYCOPROTEIN GP160  G 389 3050 0
4  Protein   T-CELL SURFACE GLYCOPROTEIN CD4  C 176 1370 0
5  Protein   17B FAB HEAVY CHAIN  H 127 987 0
6  Protein   17B FAB LIGHT CHAIN  N 110 849 0
7  Protein   ENVELOPE GLYCOPROTEIN GP160  B 136 1090 0
8  Protein   ENVELOPE GLYCOPROTEIN GP160  I 389 3050 0
9  Protein   T-CELL SURFACE GLYCOPROTEIN CD4  E 176 1370 0
10  Protein   17B FAB HEAVY CHAIN  K 127 987 0
11  Protein   17B FAB LIGHT CHAIN  O 110 849 0
12  Protein   ENVELOPE GLYCOPROTEIN GP160  D 136 1090 0
13  Protein   ENVELOPE GLYCOPROTEIN GP160  J 389 3050 0
14  Protein   T-CELL SURFACE GLYCOPROTEIN CD4  F 176 1370 0
15  Protein   17B FAB HEAVY CHAIN  M 127 987 0
16  Ligand    P 2 0 28
17  Ligand    Q 3 0 39
18  Ligand    R 7 0 83
19  Ligand    S 4 0 50
20  Ligand    T 2 0 28
21  Ligand    U 2 0 28
22  Ligand    V 4 0 50
23  Ligand    W 3 0 39
24  Ligand    X 3 0 39
25  Ligand    Y 2 0 28
26  Ligand    Z 3 0 39
27  Ligand    a 2 0 28
28  Ligand    b 3 0 39
29  Ligand    c 7 0 83
30  Ligand    d 4 0 50
31  Ligand    e 2 0 28
32  Ligand    f 2 0 28
33  Ligand    g 4 0 50
34  Ligand    h 3 0 39
35  Ligand    i 3 0 39
36  Ligand    j 2 0 28
37  Ligand    k 3 0 39
38  Ligand    l 2 0 28
39  Ligand    m 3 0 39
40  Ligand    n 7 0 83
41  Ligand    o 4 0 50
42  Ligand    p 2 0 28
43  Ligand    q 2 0 28
44  Ligand    r 4 0 50
45  Ligand    s 3 0 39
46  Ligand    t 3 0 39
47  Ligand    u 2 0 28
48  Ligand    v 3 0 39
49  Ligand   ENVELOPE GLYCOPROTEIN GP160  A 4 0 56
50  Ligand   ENVELOPE GLYCOPROTEIN GP160  G 4 0 56
51  Ligand   ENVELOPE GLYCOPROTEIN GP160  B 4 0 56
52  Ligand   ENVELOPE GLYCOPROTEIN GP160  I 4 0 56
53  Ligand   ENVELOPE GLYCOPROTEIN GP160  D 4 0 56
54  Ligand   ENVELOPE GLYCOPROTEIN GP160  J 4 0 56
total       2943 22038 1689
Proteins
Unit 1 GLU1 LEU2 GLU3 LEU4 THR5 GLN6 SER7 PRO8 ALA9 THR10 LEU11 SER12 VAL13 SER14 PRO15 GLY16 GLU17 ARG18 ALA19 THR20 LEU21 SER22 CYS23 ARG24 ALA25 SER26 GLU27 SER28 VAL29 SER30 SER31 ASP32 LEU33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ALA43 PRO44 ARG45 LEU46 LEU47 ILE48 TYR49 GLY50 ALA51 SER52 THR53 ARG54 ALA55 THR56 GLY57 VAL58 PRO59 ALA60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 ALA69 GLU70 PHE71 THR72 LEU73 THR74 ILE75 SER76 SER77 LEU78 GLN79 SER80 GLU81 ASP82 PHE83 ALA84 VAL85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 ASN92 ASN93 TRP94 PRO95 PRO95A ARG95B TYR96 THR97 PHE98 GLY99 GLN100 GLY101 THR102 ARG103 LEU104 GLU105 ILE106 LYS107 ARG108
Unit 2 LEU515 GLY516 ALA517 PHE518 ILE519 LEU520 GLY521 PHE522 LEU523 GLY524 ALA525 ALA526 GLY527 SER528 THR529 MET530 GLY531 ALA532 ALA533 SER534 MET535 ALA536 LEU537 THR538 VAL539 GLN540 ALA541 ARG542 LEU543 LEU544 LEU545 SER546 GLY547 ILE548 GLN563 HIS564 MET565 LEU566 GLN567 LEU568 THR569 VAL570 TRP571 GLY572 ILE573 LYS574 GLN575 LEU576 GLN577 ALA578 ARG579 VAL580 LEU581 ALA582 VAL583 GLU584 ARG585 TYR586 LEU587 ARG588 ASP589 GLN590 GLN591 LEU592 LEU593 GLY594 ILE595 TRP596 GLY597 CYS598 SER599 GLY600 LYS601 ILE602 ILE603 CYS604 CYS605 THR606 ASN607 VAL608 PRO609 TRP610 ASN611 ASP612 SER613 TRP614 SER615 ASN616 LYS617 THR618 ILE619 ASN620 GLU621 ILE622 TRP623 ASP624 ASN625 MET626 THR627 TRP628 MET629 GLN630 TRP631 GLU632 LYS633 GLU634 ILE635 ASP636 ASN637 TYR638 THR639 GLN640 HIS641 ILE642 TYR643 THR644 LEU645 LEU646 GLU647 VAL648 SER649 GLN650 ILE651 GLN652 GLN653 GLU654 LYS655 ASN656 GLU657 GLN658 GLU659 LEU660 LEU661 GLU662 LEU663 ASP664
Unit 3 ALA32 LYS33 LYS34 TRP35 VAL36 THR37 VAL38 TYR39 TYR40 GLY41 VAL42 PRO43 VAL44 TRP45 LYS46 GLU47 ALA48 THR49 THR50 THR51 LEU52 PHE53 CYS54 ALA55 SER56 ASP57 ALA58 LYS59 ALA60 TYR61 ASP62 THR63 GLU64 VAL65 HIS66 ASN67 VAL68 TRP69 ALA70 THR71 HIS72 ALA73 CYS74 VAL75 PRO76 THR77 ASP78 PRO79 ASN80 PRO81 GLN82 GLU83 ILE84 VAL85 LEU86 GLY87 ASN88 VAL89 THR90 GLU91 ASN92 PHE93 ASN94 MET95 TRP96 LYS97 ASN98 ASN99 MET100 VAL101 GLU102 GLN103 MET104 HIS105 GLU106 ASP107 ILE108 ILE109 SER110 LEU111 TRP112 ASP113 GLN114 SER115 LEU116 LYS117 PRO118 CYS119 VAL120 LYS121 LEU122 THR123 PRO124 LEU125 CYS126 VAL127 THR128 LEU129 ASN130 CYS131 LEU193 ILE194 ASN195 CYS196 ASN197 THR198 SER199 VAL200 ILE201 THR202 GLN203 ALA204 CYS205 PRO206 LYS207 VAL208 SER209 PHE210 GLU211 PRO212 ILE213 PRO214 ILE215 HIS216 TYR217 CYS218 ALA219 PRO220 ALA221 GLY222 PHE223 ALA224 ILE225 LEU226 LYS227 CYS228 ASN229 SER230 LYS231 THR232 PHE233 ASN234 GLY235 SER236 GLY237 PRO238 CYS239 THR240 ASN241 VAL242 SER243 THR244 VAL245 GLN246 CYS247 THR248 HIS249 GLY250 ILE251 ARG252 PRO253 VAL254 VAL255 SER256 THR257 GLN258 LEU259 LEU260 LEU261 ASN262 GLY263 SER264 LEU265 ALA266 GLU267 GLU268 GLU269 ILE270 VAL271 ILE272 ARG273 SER274 GLU275 ASN276 ILE277 THR278 ASP279 ASN280 ALA281 LYS282 THR283 ILE284 ILE285 VAL286 GLN287 LEU288 ASN289 GLU290 ALA291 VAL292 GLU293 ILE294 ASN295 CYS296 THR297 ARG298 PRO299 ASN300 ASN301 ASN302 THR303 ARG304 LYS305 SER306 ILE307 HIS308 ILE309 ASN325 ILE326 ARG327 GLN328 ALA329 HIS330 CYS331 ASN332 ILE333 SER334 LYS335 ALA336 ARG337 TRP338 ASN339 GLU340 THR341 LEU342 GLY343 GLN344 ILE345 VAL346 ALA347 LYS348 LEU349 GLU350 GLU351 GLN352 PHE353 PRO354 ASN355 LYS356 THR357 ILE358 ILE359 PHE361 ASN362 HIS363 SER364 SER365 GLY366 GLY367 ASP368 PRO369 GLU370 ILE371 VAL372 THR373 HIS374 SER375 PHE376 ASN377 CYS378 GLY379 GLY380 GLU381 PHE382 PHE383 TYR384 CYS385 ASN386 THR387 THR388 PRO389 LEU390 PHE391 ASN392 SER393 THR394 TRP395 ASN397 ASN398 THR399 ARG400 THR401 ASP402 ASP403 TYR404 GLN412 ASN413 ILE414 THR415 LEU416 GLN417 CYS418 ARG419 ILE420 LYS421 GLN422 ILE423 ILE424 ASN425 MET426 TRP427 GLN428 GLY429 VAL430 GLY431 LYS432 ALA433 MET434 TYR435 ALA436 PRO437 PRO438 ILE439 ARG440 GLY441 GLN442 ILE443 ARG444 CYS445 SER446 SER447 ASN448 ILE449 THR450 GLY451 LEU452 LEU453 LEU454 THR455 ARG456 ASP457 GLY458 GLY459 ARG460 ASP461 GLN462 ASN463 GLY464 THR465 GLU466 THR467 PHE468 ARG469 PRO470 GLY471 GLY472 GLY473 ASN474 MET475 ARG476 ASP477 ASN478 TRP479 ARG480 SER481 GLU482 LEU483 TYR484 LYS485 TYR486 LYS487 VAL488 VAL489 LYS490 ILE491 GLU492 PRO493 LEU494 GLY495 ILE496 ALA497 PRO498 THR499 ALA500 CYS501 LYS502 ARG503 ARG504 VAL505
Unit 4 LYS1 LYS2 VAL3 VAL4 LEU5 GLY6 LYS7 LYS8 GLY9 ASP10 THR11 VAL12 GLU13 LEU14 THR15 CYS16 THR17 ALA18 SER19 GLN20 LYS21 LYS22 SER23 ILE24 GLN25 PHE26 HIS27 TRP28 LYS29 ASN30 SER31 ASN32 GLN33 ILE34 LYS35 ILE36 LEU37 GLY38 ASN39 GLN40 GLY41 SER42 PHE43 LEU44 THR45 LYS46 GLY47 PRO48 SER49 LYS50 LEU51 ASN52 ASP53 ARG54 ALA55 ASP56 SER57 ARG58 ARG59 SER60 LEU61 TRP62 ASP63 GLN64 GLY65 ASN66 PHE67 PRO68 LEU69 ILE70 ILE71 LYS72 ASN73 LEU74 LYS75 ILE76 GLU77 ASP78 SER79 ASP80 THR81 TYR82 ILE83 CYS84 GLU85 VAL86 GLU87 ASP88 GLN89 LYS90 GLU91 GLU92 VAL93 GLN94 LEU95 LEU96 VAL97 PHE98 GLY99 LEU100 THR101 ALA102 ASN103 SER104 ASP105 THR106 HIS107 LEU108 LEU109 GLN110 GLY111 GLN112 SER113 LEU114 THR115 LEU116 THR117 LEU118 GLU119 SER120 PRO121 PRO122 GLY123 SER124 SER125 PRO126 SER127 VAL128 GLN129 CYS130 ARG131 SER132 PRO133 ARG134 GLY135 LYS136 ASN137 ILE138 GLN139 GLY140 GLY141 LYS142 THR143 LEU144 SER145 VAL146 SER147 GLN148 LEU149 GLU150 LEU151 GLN152 ASP153 SER154 GLY155 THR156 TRP157 THR158 CYS159 THR160 VAL161 LEU162 GLN163 ASN164 GLN165 LYS166 LYS167 VAL168 GLU169 PHE170 LYS171 ILE172 ASP173 ILE174 VAL175 VAL176
Unit 5 GLN1 VAL2 GLN3 LEU4 LEU5 GLU6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 SER16 SER17 VAL18 LYS19 VAL20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 ASP27 THR28 PHE29 ILE30 ARG31 TYR32 SER33 PHE34 THR35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 MET48 GLY49 ARG50 ILE51 ILE52 THR52A ILE53 LEU54 ASP55 VAL56 ALA57 HIS58 TYR59 ALA60 PRO61 HIS62 LEU63 GLN64 GLY65 ARG66 VAL67 THR68 ILE69 THR70 ALA71 ASP72 LYS73 SER74 THR75 SER76 THR77 VAL78 TYR79 LEU80 GLU81 LEU82 ARG82A ASN82B LEU82C ARG83 SER84 ASP85 ASP86 THR87 ALA88 VAL89 TYR90 PHE91 CYS92 ALA93 GLY94 VAL95 TYR96 GLU97 GLY98 GLU99 ALA100 ASP100A GLU100B GLY100C GLU100D TYR100E ASP100F ASN100G ASN100H GLY100I PHE100J LEU100K LYS101 HIS102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 THR112
Unit 6 GLU1 LEU2 GLU3 LEU4 THR5 GLN6 SER7 PRO8 ALA9 THR10 LEU11 SER12 VAL13 SER14 PRO15 GLY16 GLU17 ARG18 ALA19 THR20 LEU21 SER22 CYS23 ARG24 ALA25 SER26 GLU27 SER28 VAL29 SER30 SER31 ASP32 LEU33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ALA43 PRO44 ARG45 LEU46 LEU47 ILE48 TYR49 GLY50 ALA51 SER52 THR53 ARG54 ALA55 THR56 GLY57 VAL58 PRO59 ALA60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 ALA69 GLU70 PHE71 THR72 LEU73 THR74 ILE75 SER76 SER77 LEU78 GLN79 SER80 GLU81 ASP82 PHE83 ALA84 VAL85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 ASN92 ASN93 TRP94 PRO95 PRO95A ARG95B TYR96 THR97 PHE98 GLY99 GLN100 GLY101 THR102 ARG103 LEU104 GLU105 ILE106 LYS107 ARG108
Unit 7 LEU515 GLY516 ALA517 PHE518 ILE519 LEU520 GLY521 PHE522 LEU523 GLY524 ALA525 ALA526 GLY527 SER528 THR529 MET530 GLY531 ALA532 ALA533 SER534 MET535 ALA536 LEU537 THR538 VAL539 GLN540 ALA541 ARG542 LEU543 LEU544 LEU545 SER546 GLY547 ILE548 GLN563 HIS564 MET565 LEU566 GLN567 LEU568 THR569 VAL570 TRP571 GLY572 ILE573 LYS574 GLN575 LEU576 GLN577 ALA578 ARG579 VAL580 LEU581 ALA582 VAL583 GLU584 ARG585 TYR586 LEU587 ARG588 ASP589 GLN590 GLN591 LEU592 LEU593 GLY594 ILE595 TRP596 GLY597 CYS598 SER599 GLY600 LYS601 ILE602 ILE603 CYS604 CYS605 THR606 ASN607 VAL608 PRO609 TRP610 ASN611 ASP612 SER613 TRP614 SER615 ASN616 LYS617 THR618 ILE619 ASN620 GLU621 ILE622 TRP623 ASP624 ASN625 MET626 THR627 TRP628 MET629 GLN630 TRP631 GLU632 LYS633 GLU634 ILE635 ASP636 ASN637 TYR638 THR639 GLN640 HIS641 ILE642 TYR643 THR644 LEU645 LEU646 GLU647 VAL648 SER649 GLN650 ILE651 GLN652 GLN653 GLU654 LYS655 ASN656 GLU657 GLN658 GLU659 LEU660 LEU661 GLU662 LEU663 ASP664
Unit 8 ALA32 LYS33 LYS34 TRP35 VAL36 THR37 VAL38 TYR39 TYR40 GLY41 VAL42 PRO43 VAL44 TRP45 LYS46 GLU47 ALA48 THR49 THR50 THR51 LEU52 PHE53 CYS54 ALA55 SER56 ASP57 ALA58 LYS59 ALA60 TYR61 ASP62 THR63 GLU64 VAL65 HIS66 ASN67 VAL68 TRP69 ALA70 THR71 HIS72 ALA73 CYS74 VAL75 PRO76 THR77 ASP78 PRO79 ASN80 PRO81 GLN82 GLU83 ILE84 VAL85 LEU86 GLY87 ASN88 VAL89 THR90 GLU91 ASN92 PHE93 ASN94 MET95 TRP96 LYS97 ASN98 ASN99 MET100 VAL101 GLU102 GLN103 MET104 HIS105 GLU106 ASP107 ILE108 ILE109 SER110 LEU111 TRP112 ASP113 GLN114 SER115 LEU116 LYS117 PRO118 CYS119 VAL120 LYS121 LEU122 THR123 PRO124 LEU125 CYS126 VAL127 THR128 LEU129 ASN130 CYS131 LEU193 ILE194 ASN195 CYS196 ASN197 THR198 SER199 VAL200 ILE201 THR202 GLN203 ALA204 CYS205 PRO206 LYS207 VAL208 SER209 PHE210 GLU211 PRO212 ILE213 PRO214 ILE215 HIS216 TYR217 CYS218 ALA219 PRO220 ALA221 GLY222 PHE223 ALA224 ILE225 LEU226 LYS227 CYS228 ASN229 SER230 LYS231 THR232 PHE233 ASN234 GLY235 SER236 GLY237 PRO238 CYS239 THR240 ASN241 VAL242 SER243 THR244 VAL245 GLN246 CYS247 THR248 HIS249 GLY250 ILE251 ARG252 PRO253 VAL254 VAL255 SER256 THR257 GLN258 LEU259 LEU260 LEU261 ASN262 GLY263 SER264 LEU265 ALA266 GLU267 GLU268 GLU269 ILE270 VAL271 ILE272 ARG273 SER274 GLU275 ASN276 ILE277 THR278 ASP279 ASN280 ALA281 LYS282 THR283 ILE284 ILE285 VAL286 GLN287 LEU288 ASN289 GLU290 ALA291 VAL292 GLU293 ILE294 ASN295 CYS296 THR297 ARG298 PRO299 ASN300 ASN301 ASN302 THR303 ARG304 LYS305 SER306 ILE307 HIS308 ILE309 ASN325 ILE326 ARG327 GLN328 ALA329 HIS330 CYS331 ASN332 ILE333 SER334 LYS335 ALA336 ARG337 TRP338 ASN339 GLU340 THR341 LEU342 GLY343 GLN344 ILE345 VAL346 ALA347 LYS348 LEU349 GLU350 GLU351 GLN352 PHE353 PRO354 ASN355 LYS356 THR357 ILE358 ILE359 PHE361 ASN362 HIS363 SER364 SER365 GLY366 GLY367 ASP368 PRO369 GLU370 ILE371 VAL372 THR373 HIS374 SER375 PHE376 ASN377 CYS378 GLY379 GLY380 GLU381 PHE382 PHE383 TYR384 CYS385 ASN386 THR387 THR388 PRO389 LEU390 PHE391 ASN392 SER393 THR394 TRP395 ASN397 ASN398 THR399 ARG400 THR401 ASP402 ASP403 TYR404 GLN412 ASN413 ILE414 THR415 LEU416 GLN417 CYS418 ARG419 ILE420 LYS421 GLN422 ILE423 ILE424 ASN425 MET426 TRP427 GLN428 GLY429 VAL430 GLY431 LYS432 ALA433 MET434 TYR435 ALA436 PRO437 PRO438 ILE439 ARG440 GLY441 GLN442 ILE443 ARG444 CYS445 SER446 SER447 ASN448 ILE449 THR450 GLY451 LEU452 LEU453 LEU454 THR455 ARG456 ASP457 GLY458 GLY459 ARG460 ASP461 GLN462 ASN463 GLY464 THR465 GLU466 THR467 PHE468 ARG469 PRO470 GLY471 GLY472 GLY473 ASN474 MET475 ARG476 ASP477 ASN478 TRP479 ARG480 SER481 GLU482 LEU483 TYR484 LYS485 TYR486 LYS487 VAL488 VAL489 LYS490 ILE491 GLU492 PRO493 LEU494 GLY495 ILE496 ALA497 PRO498 THR499 ALA500 CYS501 LYS502 ARG503 ARG504 VAL505
Unit 9 LYS1 LYS2 VAL3 VAL4 LEU5 GLY6 LYS7 LYS8 GLY9 ASP10 THR11 VAL12 GLU13 LEU14 THR15 CYS16 THR17 ALA18 SER19 GLN20 LYS21 LYS22 SER23 ILE24 GLN25 PHE26 HIS27 TRP28 LYS29 ASN30 SER31 ASN32 GLN33 ILE34 LYS35 ILE36 LEU37 GLY38 ASN39 GLN40 GLY41 SER42 PHE43 LEU44 THR45 LYS46 GLY47 PRO48 SER49 LYS50 LEU51 ASN52 ASP53 ARG54 ALA55 ASP56 SER57 ARG58 ARG59 SER60 LEU61 TRP62 ASP63 GLN64 GLY65 ASN66 PHE67 PRO68 LEU69 ILE70 ILE71 LYS72 ASN73 LEU74 LYS75 ILE76 GLU77 ASP78 SER79 ASP80 THR81 TYR82 ILE83 CYS84 GLU85 VAL86 GLU87 ASP88 GLN89 LYS90 GLU91 GLU92 VAL93 GLN94 LEU95 LEU96 VAL97 PHE98 GLY99 LEU100 THR101 ALA102 ASN103 SER104 ASP105 THR106 HIS107 LEU108 LEU109 GLN110 GLY111 GLN112 SER113 LEU114 THR115 LEU116 THR117 LEU118 GLU119 SER120 PRO121 PRO122 GLY123 SER124 SER125 PRO126 SER127 VAL128 GLN129 CYS130 ARG131 SER132 PRO133 ARG134 GLY135 LYS136 ASN137 ILE138 GLN139 GLY140 GLY141 LYS142 THR143 LEU144 SER145 VAL146 SER147 GLN148 LEU149 GLU150 LEU151 GLN152 ASP153 SER154 GLY155 THR156 TRP157 THR158 CYS159 THR160 VAL161 LEU162 GLN163 ASN164 GLN165 LYS166 LYS167 VAL168 GLU169 PHE170 LYS171 ILE172 ASP173 ILE174 VAL175 VAL176
Unit 10 GLN1 VAL2 GLN3 LEU4 LEU5 GLU6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 SER16 SER17 VAL18 LYS19 VAL20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 ASP27 THR28 PHE29 ILE30 ARG31 TYR32 SER33 PHE34 THR35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 MET48 GLY49 ARG50 ILE51 ILE52 THR52A ILE53 LEU54 ASP55 VAL56 ALA57 HIS58 TYR59 ALA60 PRO61 HIS62 LEU63 GLN64 GLY65 ARG66 VAL67 THR68 ILE69 THR70 ALA71 ASP72 LYS73 SER74 THR75 SER76 THR77 VAL78 TYR79 LEU80 GLU81 LEU82 ARG82A ASN82B LEU82C ARG83 SER84 ASP85 ASP86 THR87 ALA88 VAL89 TYR90 PHE91 CYS92 ALA93 GLY94 VAL95 TYR96 GLU97 GLY98 GLU99 ALA100 ASP100A GLU100B GLY100C GLU100D TYR100E ASP100F ASN100G ASN100H GLY100I PHE100J LEU100K LYS101 HIS102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 THR112
Unit 11 GLU1 LEU2 GLU3 LEU4 THR5 GLN6 SER7 PRO8 ALA9 THR10 LEU11 SER12 VAL13 SER14 PRO15 GLY16 GLU17 ARG18 ALA19 THR20 LEU21 SER22 CYS23 ARG24 ALA25 SER26 GLU27 SER28 VAL29 SER30 SER31 ASP32 LEU33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ALA43 PRO44 ARG45 LEU46 LEU47 ILE48 TYR49 GLY50 ALA51 SER52 THR53 ARG54 ALA55 THR56 GLY57 VAL58 PRO59 ALA60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 ALA69 GLU70 PHE71 THR72 LEU73 THR74 ILE75 SER76 SER77 LEU78 GLN79 SER80 GLU81 ASP82 PHE83 ALA84 VAL85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 ASN92 ASN93 TRP94 PRO95 PRO95A ARG95B TYR96 THR97 PHE98 GLY99 GLN100 GLY101 THR102 ARG103 LEU104 GLU105 ILE106 LYS107 ARG108
Unit 12 LEU515 GLY516 ALA517 PHE518 ILE519 LEU520 GLY521 PHE522 LEU523 GLY524 ALA525 ALA526 GLY527 SER528 THR529 MET530 GLY531 ALA532 ALA533 SER534 MET535 ALA536 LEU537 THR538 VAL539 GLN540 ALA541 ARG542 LEU543 LEU544 LEU545 SER546 GLY547 ILE548 GLN563 HIS564 MET565 LEU566 GLN567 LEU568 THR569 VAL570 TRP571 GLY572 ILE573 LYS574 GLN575 LEU576 GLN577 ALA578 ARG579 VAL580 LEU581 ALA582 VAL583 GLU584 ARG585 TYR586 LEU587 ARG588 ASP589 GLN590 GLN591 LEU592 LEU593 GLY594 ILE595 TRP596 GLY597 CYS598 SER599 GLY600 LYS601 ILE602 ILE603 CYS604 CYS605 THR606 ASN607 VAL608 PRO609 TRP610 ASN611 ASP612 SER613 TRP614 SER615 ASN616 LYS617 THR618 ILE619 ASN620 GLU621 ILE622 TRP623 ASP624 ASN625 MET626 THR627 TRP628 MET629 GLN630 TRP631 GLU632 LYS633 GLU634 ILE635 ASP636 ASN637 TYR638 THR639 GLN640 HIS641 ILE642 TYR643 THR644 LEU645 LEU646 GLU647 VAL648 SER649 GLN650 ILE651 GLN652 GLN653 GLU654 LYS655 ASN656 GLU657 GLN658 GLU659 LEU660 LEU661 GLU662 LEU663 ASP664
Unit 13 ALA32 LYS33 LYS34 TRP35 VAL36 THR37 VAL38 TYR39 TYR40 GLY41 VAL42 PRO43 VAL44 TRP45 LYS46 GLU47 ALA48 THR49 THR50 THR51 LEU52 PHE53 CYS54 ALA55 SER56 ASP57 ALA58 LYS59 ALA60 TYR61 ASP62 THR63 GLU64 VAL65 HIS66 ASN67 VAL68 TRP69 ALA70 THR71 HIS72 ALA73 CYS74 VAL75 PRO76 THR77 ASP78 PRO79 ASN80 PRO81 GLN82 GLU83 ILE84 VAL85 LEU86 GLY87 ASN88 VAL89 THR90 GLU91 ASN92 PHE93 ASN94 MET95 TRP96 LYS97 ASN98 ASN99 MET100 VAL101 GLU102 GLN103 MET104 HIS105 GLU106 ASP107 ILE108 ILE109 SER110 LEU111 TRP112 ASP113 GLN114 SER115 LEU116 LYS117 PRO118 CYS119 VAL120 LYS121 LEU122 THR123 PRO124 LEU125 CYS126 VAL127 THR128 LEU129 ASN130 CYS131 LEU193 ILE194 ASN195 CYS196 ASN197 THR198 SER199 VAL200 ILE201 THR202 GLN203 ALA204 CYS205 PRO206 LYS207 VAL208 SER209 PHE210 GLU211 PRO212 ILE213 PRO214 ILE215 HIS216 TYR217 CYS218 ALA219 PRO220 ALA221 GLY222 PHE223 ALA224 ILE225 LEU226 LYS227 CYS228 ASN229 SER230 LYS231 THR232 PHE233 ASN234 GLY235 SER236 GLY237 PRO238 CYS239 THR240 ASN241 VAL242 SER243 THR244 VAL245 GLN246 CYS247 THR248 HIS249 GLY250 ILE251 ARG252 PRO253 VAL254 VAL255 SER256 THR257 GLN258 LEU259 LEU260 LEU261 ASN262 GLY263 SER264 LEU265 ALA266 GLU267 GLU268 GLU269 ILE270 VAL271 ILE272 ARG273 SER274 GLU275 ASN276 ILE277 THR278 ASP279 ASN280 ALA281 LYS282 THR283 ILE284 ILE285 VAL286 GLN287 LEU288 ASN289 GLU290 ALA291 VAL292 GLU293 ILE294 ASN295 CYS296 THR297 ARG298 PRO299 ASN300 ASN301 ASN302 THR303 ARG304 LYS305 SER306 ILE307 HIS308 ILE309 ASN325 ILE326 ARG327 GLN328 ALA329 HIS330 CYS331 ASN332 ILE333 SER334 LYS335 ALA336 ARG337 TRP338 ASN339 GLU340 THR341 LEU342 GLY343 GLN344 ILE345 VAL346 ALA347 LYS348 LEU349 GLU350 GLU351 GLN352 PHE353 PRO354 ASN355 LYS356 THR357 ILE358 ILE359 PHE361 ASN362 HIS363 SER364 SER365 GLY366 GLY367 ASP368 PRO369 GLU370 ILE371 VAL372 THR373 HIS374 SER375 PHE376 ASN377 CYS378 GLY379 GLY380 GLU381 PHE382 PHE383 TYR384 CYS385 ASN386 THR387 THR388 PRO389 LEU390 PHE391 ASN392 SER393 THR394 TRP395 ASN397 ASN398 THR399 ARG400 THR401 ASP402 ASP403 TYR404 GLN412 ASN413 ILE414 THR415 LEU416 GLN417 CYS418 ARG419 ILE420 LYS421 GLN422 ILE423 ILE424 ASN425 MET426 TRP427 GLN428 GLY429 VAL430 GLY431 LYS432 ALA433 MET434 TYR435 ALA436 PRO437 PRO438 ILE439 ARG440 GLY441 GLN442 ILE443 ARG444 CYS445 SER446 SER447 ASN448 ILE449 THR450 GLY451 LEU452 LEU453 LEU454 THR455 ARG456 ASP457 GLY458 GLY459 ARG460 ASP461 GLN462 ASN463 GLY464 THR465 GLU466 THR467 PHE468 ARG469 PRO470 GLY471 GLY472 GLY473 ASN474 MET475 ARG476 ASP477 ASN478 TRP479 ARG480 SER481 GLU482 LEU483 TYR484 LYS485 TYR486 LYS487 VAL488 VAL489 LYS490 ILE491 GLU492 PRO493 LEU494 GLY495 ILE496 ALA497 PRO498 THR499 ALA500 CYS501 LYS502 ARG503 ARG504 VAL505
Unit 14 LYS1 LYS2 VAL3 VAL4 LEU5 GLY6 LYS7 LYS8 GLY9 ASP10 THR11 VAL12 GLU13 LEU14 THR15 CYS16 THR17 ALA18 SER19 GLN20 LYS21 LYS22 SER23 ILE24 GLN25 PHE26 HIS27 TRP28 LYS29 ASN30 SER31 ASN32 GLN33 ILE34 LYS35 ILE36 LEU37 GLY38 ASN39 GLN40 GLY41 SER42 PHE43 LEU44 THR45 LYS46 GLY47 PRO48 SER49 LYS50 LEU51 ASN52 ASP53 ARG54 ALA55 ASP56 SER57 ARG58 ARG59 SER60 LEU61 TRP62 ASP63 GLN64 GLY65 ASN66 PHE67 PRO68 LEU69 ILE70 ILE71 LYS72 ASN73 LEU74 LYS75 ILE76 GLU77 ASP78 SER79 ASP80 THR81 TYR82 ILE83 CYS84 GLU85 VAL86 GLU87 ASP88 GLN89 LYS90 GLU91 GLU92 VAL93 GLN94 LEU95 LEU96 VAL97 PHE98 GLY99 LEU100 THR101 ALA102 ASN103 SER104 ASP105 THR106 HIS107 LEU108 LEU109 GLN110 GLY111 GLN112 SER113 LEU114 THR115 LEU116 THR117 LEU118 GLU119 SER120 PRO121 PRO122 GLY123 SER124 SER125 PRO126 SER127 VAL128 GLN129 CYS130 ARG131 SER132 PRO133 ARG134 GLY135 LYS136 ASN137 ILE138 GLN139 GLY140 GLY141 LYS142 THR143 LEU144 SER145 VAL146 SER147 GLN148 LEU149 GLU150 LEU151 GLN152 ASP153 SER154 GLY155 THR156 TRP157 THR158 CYS159 THR160 VAL161 LEU162 GLN163 ASN164 GLN165 LYS166 LYS167 VAL168 GLU169 PHE170 LYS171 ILE172 ASP173 ILE174 VAL175 VAL176
Unit 15 GLN1 VAL2 GLN3 LEU4 LEU5 GLU6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 SER16 SER17 VAL18 LYS19 VAL20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 ASP27 THR28 PHE29 ILE30 ARG31 TYR32 SER33 PHE34 THR35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 MET48 GLY49 ARG50 ILE51 ILE52 THR52A ILE53 LEU54 ASP55 VAL56 ALA57 HIS58 TYR59 ALA60 PRO61 HIS62 LEU63 GLN64 GLY65 ARG66 VAL67 THR68 ILE69 THR70 ALA71 ASP72 LYS73 SER74 THR75 SER76 THR77 VAL78 TYR79 LEU80 GLU81 LEU82 ARG82A ASN82B LEU82C ARG83 SER84 ASP85 ASP86 THR87 ALA88 VAL89 TYR90 PHE91 CYS92 ALA93 GLY94 VAL95 TYR96 GLU97 GLY98 GLU99 ALA100 ASP100A GLU100B GLY100C GLU100D TYR100E ASP100F ASN100G ASN100H GLY100I PHE100J LEU100K LYS101 HIS102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 THR112
Ligands
Unit 16 NAG1 NAG2
Unit 17 NAG1 NAG2 BMA3
Unit 18 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 MAN7
Unit 19 NAG1 NAG2 BMA3 MAN4
Unit 20 NAG1 NAG2
Unit 21 NAG1 NAG2
Unit 22 NAG1 NAG2 BMA3 MAN4
Unit 23 NAG1 NAG2 BMA3
Unit 24 NAG1 NAG2 BMA3
Unit 25 NAG1 NAG2
Unit 26 NAG1 NAG2 BMA3
Unit 27 NAG1 NAG2
Unit 28 NAG1 NAG2 BMA3
Unit 29 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 MAN7
Unit 30 NAG1 NAG2 BMA3 MAN4
Unit 31 NAG1 NAG2
Unit 32 NAG1 NAG2
Unit 33 NAG1 NAG2 BMA3 MAN4
Unit 34 NAG1 NAG2 BMA3
Unit 35 NAG1 NAG2 BMA3
Unit 36 NAG1 NAG2
Unit 37 NAG1 NAG2 BMA3
Unit 38 NAG1 NAG2
Unit 39 NAG1 NAG2 BMA3
Unit 40 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 MAN7
Unit 41 NAG1 NAG2 BMA3 MAN4
Unit 42 NAG1 NAG2
Unit 43 NAG1 NAG2
Unit 44 NAG1 NAG2 BMA3 MAN4
Unit 45 NAG1 NAG2 BMA3
Unit 46 NAG1 NAG2 BMA3
Unit 47 NAG1 NAG2
Unit 48 NAG1 NAG2 BMA3
Unit 49 NAG701 NAG702 NAG703 NAG704
Unit 50 NAG601 NAG622 NAG623 NAG631
Unit 51 NAG701 NAG702 NAG703 NAG704
Unit 52 NAG601 NAG622 NAG623 NAG631
Unit 53 NAG701 NAG702 NAG703 NAG704
Unit 54 NAG601 NAG622 NAG623 NAG631
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany