5VIG - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF ANTI-ZIKA ANTIBODY Z006 BOUND TO ZIKA V ENVELOPE PROTEIN DIII
• Keywords: ANTIBODY, FAB, ZIKA, DENGUE, RECURRENT, NEUTRALIZING, IMMUNE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5VIG	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FAB HEAVY CHAIN	H	213	1596	0
2	Protein	FAB LIGHT CHAIN	L	212	1591	0
3	Protein	ZIKA VIRUS ENVELOPE PROTEIN DIII	Z	100	759	0
4	Protein	FAB HEAVY CHAIN	A	213	1596	0
5	Protein	FAB LIGHT CHAIN	B	212	1591	0
6	Protein	ZIKA VIRUS ENVELOPE PROTEIN DIII	G	100	759	0
7	Ligand	FAB HEAVY CHAIN	A	1	0	13
total				1051	7892	13

Proteins

Unit 1	VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 LYS 30 ASN 31 TYR 32 ALA 33 MET 34 ALA 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 LEU 50 LEU 51 TYR 52 ASN 52A SER 53 GLU 54 GLU 55 SER 56 THR 57 TYR 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 SER 74 LYS 75 ASN 76 THR 77 LEU 78 PHE 79 LEU 80 GLN 81 MET 82 ASN 82A ARG 82B LEU 82C ARG 83 VAL 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 PHE 91 CYS 92 VAL 93 ARG 94 ASP 95 ARG 96 SER 97 ASN 98 GLY 99 TRP 100 SER 100A SER 100B ILE 100C ASN 101 LEU 102 TRP 103 GLY 104 ARG 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 127 GLY 134 THR 135 ALA 136 ALA 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 SER 186 SER 187 SER 188 LEU 189 GLY 190 THR 191 GLN 192 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 ARG 210 VAL 211 GLU 212 PRO 213
Unit 2	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 THR 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 MET 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 THR 28 ILE 29 SER 30 GLY 31 TRP 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 GLN 50 ALA 51 SER 52 ARG 53 LEU 54 GLU 55 SER 56 GLY 57 ILE 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLU 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 ASP 81 ASP 82 VAL 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 TYR 91 SER 92 THR 93 PHE 94 TRP 96 THR 97 PHE 98 GLY 99 LEU 100 GLY 101 THR 102 LYS 103 VAL 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 GLY 212 GLU 213
Unit 3	TYR 305 SER 306 LEU 307 CYS 308 THR 309 ALA 310 ALA 311 PHE 312 THR 313 PHE 314 THR 315 LYS 316 ILE 317 PRO 318 ALA 319 GLU 320 THR 321 LEU 322 HIS 323 GLY 324 THR 325 VAL 326 THR 327 VAL 328 GLU 329 VAL 330 GLN 331 TYR 332 ALA 333 GLY 334 THR 335 ASP 336 GLY 337 PRO 338 CYS 339 LYS 340 VAL 341 PRO 342 ALA 343 GLN 344 MET 345 ALA 346 VAL 347 ASP 348 MET 349 GLN 350 THR 351 LEU 352 THR 353 PRO 354 VAL 355 GLY 356 ARG 357 LEU 358 ILE 359 THR 360 ALA 361 ASN 362 PRO 363 VAL 364 ILE 365 THR 366 GLU 367 SER 368 THR 369 GLU 370 ASN 371 SER 372 LYS 373 MET 374 MET 375 LEU 376 GLU 377 LEU 378 ASP 379 PRO 380 PRO 381 PHE 382 GLY 383 ASP 384 SER 385 TYR 386 ILE 387 VAL 388 ILE 389 GLY 390 VAL 391 GLY 392 GLU 393 LYS 394 LYS 395 ILE 396 THR 397 HIS 398 HIS 399 TRP 400 HIS 401 ARG 402 SER 403 GLY 404
Unit 4	VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 LYS 30 ASN 31 TYR 32 ALA 33 MET 34 ALA 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 LEU 50 LEU 51 TYR 52 ASN 52A SER 53 GLU 54 GLU 55 SER 56 THR 57 TYR 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 SER 74 LYS 75 ASN 76 THR 77 LEU 78 PHE 79 LEU 80 GLN 81 MET 82 ASN 82A ARG 82B LEU 82C ARG 83 VAL 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 PHE 91 CYS 92 VAL 93 ARG 94 ASP 95 ARG 96 SER 97 ASN 98 GLY 99 TRP 100 SER 100A SER 100B ILE 100C ASN 101 LEU 102 TRP 103 GLY 104 ARG 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 127 GLY 134 THR 135 ALA 136 ALA 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 SER 186 SER 187 SER 188 LEU 189 GLY 190 THR 191 GLN 192 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 ARG 210 VAL 211 GLU 212 PRO 213
Unit 5	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 THR 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 MET 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 THR 28 ILE 29 SER 30 GLY 31 TRP 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 GLN 50 ALA 51 SER 52 ARG 53 LEU 54 GLU 55 SER 56 GLY 57 ILE 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLU 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 ASP 81 ASP 82 VAL 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 TYR 91 SER 92 THR 93 PHE 94 TRP 96 THR 97 PHE 98 GLY 99 LEU 100 GLY 101 THR 102 LYS 103 VAL 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 GLY 212 GLU 213
Unit 6	TYR 305 SER 306 LEU 307 CYS 308 THR 309 ALA 310 ALA 311 PHE 312 THR 313 PHE 314 THR 315 LYS 316 ILE 317 PRO 318 ALA 319 GLU 320 THR 321 LEU 322 HIS 323 GLY 324 THR 325 VAL 326 THR 327 VAL 328 GLU 329 VAL 330 GLN 331 TYR 332 ALA 333 GLY 334 THR 335 ASP 336 GLY 337 PRO 338 CYS 339 LYS 340 VAL 341 PRO 342 ALA 343 GLN 344 MET 345 ALA 346 VAL 347 ASP 348 MET 349 GLN 350 THR 351 LEU 352 THR 353 PRO 354 VAL 355 GLY 356 ARG 357 LEU 358 ILE 359 THR 360 ALA 361 ASN 362 PRO 363 VAL 364 ILE 365 THR 366 GLU 367 SER 368 THR 369 GLU 370 ASN 371 SER 372 LYS 373 MET 374 MET 375 LEU 376 GLU 377 LEU 378 ASP 379 PRO 380 PRO 381 PHE 382 GLY 383 ASP 384 SER 385 TYR 386 ILE 387 VAL 388 ILE 389 GLY 390 VAL 391 GLY 392 GLU 393 LYS 394 LYS 395 ILE 396 THR 397 HIS 398 HIS 399 TRP 400 HIS 401 ARG 402 SER 403 GLY 404

Ligands

Unit 7

FLC 500