5VC8 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE WHSC1 PWWP1 DOMAIN
• Keywords: PWWP DOMAIN, STRUCTURAL GENOMICS CONSORTIUM, DNA BINDING PRO
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5VC8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HISTONE-LYSINE N-METHYLTRANSFERASE NSD2	A	126	950	24
2	Protein	HISTONE-LYSINE N-METHYLTRANSFERASE NSD2	B	126	932	24
3	Other macromolecule	DODECA-2-DEOXY-NUCLEOTIDE, POORLY RESOLVED BY ELE DENSITY	W	12	243	0
4	Other macromolecule	DODECA-2-DEOXY-NUCLEOTIDE, POORLY RESOLVED BY ELE DENSITY	X	12	243	0
5	Other macromolecule	DODECA-2-DEOXY-NUCLEOTIDE, POORLY RESOLVED BY ELE DENSITY	Y	12	243	0
6	Other macromolecule	DNA (5'-D(P*CP*TP*(DN))-3')	Z	3	39	4
7	Ligand	HISTONE-LYSINE N-METHYLTRANSFERASE NSD2	A	20	0	20
8	Ligand	HISTONE-LYSINE N-METHYLTRANSFERASE NSD2	B	19	0	19
9	Water			106	0	106
total				436	2650	197

Proteins

Unit 1

HIS 216 LEU 217 LEU 218 LYS 219 TYR 220 ASN 221 VAL 222 GLY 223 ASP 224 LEU 225 VAL 226 TRP 227 SER 228 LYS 229 VAL 230 SER 231 GLY 232 TYR 233 PRO 234 TRP 235 TRP 236 PRO 237 CYS 238 MSE 239 VAL 240 SER 241 ALA 242 ASP 243 PRO 244 LEU 245 LEU 246 HIS 247 SER 248 TYR 249 THR 250 LYS 251 LEU 252 LYS 253 ALA 259 ARG 260 GLN 261 TYR 262 HIS 263 VAL 264 GLN 265 PHE 266 PHE 267 GLY 268 ASP 269 ALA 270 PRO 271 GLU 272 ARG 273 ALA 274 TRP 275 ILE 276 PHE 277 GLU 278 LYS 279 SER 280 LEU 281 VAL 282 ALA 283 PHE 284 GLU 285 GLY 286 GLU 287 GLY 288 GLN 289 PHE 290 GLU 291 LYS 292 LEU 293 CYS 294 GLN 295 GLU 296 SER 297 ALA 298 LYS 299 GLN 300 ALA 301 PRO 302 THR 303 LYS 304 ALA 305 GLU 306 LYS 307 ILE 308 LYS 309 LEU 310 LEU 311 LYS 312 PRO 313 ILE 314 SER 315 GLY 316 LYS 317 LEU 318 ARG 319 ALA 320 GLN 321 TRP 322 GLU 323 MSE 324 GLY 325 ILE 326 VAL 327 GLN 328 ALA 329 GLU 330 GLU 331 ALA 332 ALA 333 SER 334 MSE 335 SER 336 VAL 337 GLU 338 GLU 339 ARG 340 LYS 341 ALA 342 LYS 343 PHE 344 THR 345 PHE 346

Unit 2

LEU 217 LEU 218 LYS 219 TYR 220 ASN 221 VAL 222 GLY 223 ASP 224 LEU 225 VAL 226 TRP 227 SER 228 LYS 229 VAL 230 SER 231 GLY 232 TYR 233 PRO 234 TRP 235 TRP 236 PRO 237 CYS 238 MSE 239 VAL 240 SER 241 ALA 242 ASP 243 PRO 244 LEU 245 LEU 246 HIS 247 SER 248 TYR 249 THR 250 LYS 251 LEU 252 LYS 253 GLY 254 GLN 255 LYS 256 LYS 257 SER 258 ALA 259 ARG 260 GLN 261 TYR 262 HIS 263 VAL 264 GLN 265 PHE 266 PHE 267 GLY 268 ASP 269 ALA 270 PRO 271 GLU 272 ARG 273 ALA 274 TRP 275 ILE 276 PHE 277 GLU 278 LYS 279 SER 280 LEU 281 VAL 282 ALA 283 PHE 284 GLU 285 GLY 286 GLU 287 GLY 288 GLN 289 PHE 290 GLU 291 LYS 292 LEU 293 CYS 294 GLN 295 GLU 296 SER 297 ALA 298 LYS 299 GLN 300 ALA 301 LEU 310 LEU 311 LYS 312 PRO 313 ILE 314 SER 315 GLY 316 LYS 317 LEU 318 ARG 319 ALA 320 GLN 321 TRP 322 GLU 323 MSE 324 GLY 325 ILE 326 VAL 327 GLN 328 ALA 329 GLU 330 GLU 331 ALA 332 ALA 333 SER 334 MSE 335 SER 336 VAL 337 GLU 338 GLU 339 ARG 340 LYS 341 ALA 342 LYS 343 PHE 344 THR 345 PHE 346 LEU 347 TYR 348 VAL 349 GLY 350

Other macromolecules

Unit 3	DG 1 DA 2 DG 3 DA 4 DT 5 DC 6 DG 7 DA 8 DT 9 DC 10 DT 11 DC 12
Unit 4	DG 1 DA 2 DG 3 DA 4 DT 5 DC 6 DG 7 DA 8 DT 9 DC 10 DT 11 DC 12
Unit 5	DG 1 DA 2 DG 3 DA 4 DT 5 DC 6 DG 7 DA 8 DT 9 DC 10 DT 11 DC 12
Unit 6	DC 0 DT 1 DN 2

Ligands

Unit 7	UNX 401 UNX 402 UNX 403 UNX 404 UNX 405 UNX 406 UNX 407 UNX 408 UNX 409 UNX 410 UNX 411 UNX 412 UNX 413 UNX 414 UNX 415 UNX 416 UNX 417 UNX 418 UNX 419 UNX 420
Unit 8	UNX 401 UNX 402 UNX 403 UNX 404 UNX 405 UNX 406 UNX 407 UNX 408 UNX 409 UNX 410 UNX 411 UNX 412 UNX 413 UNX 414 UNX 415 UNX 416 UNX 417 UNX 418 UNX 419