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Sequence, Chains, Asymmetric and Biological Units

Title DIMERIZED STRUCTURE GIVES FURTHER INSIGHT INTO THE FUNCTION NOVEL RNA GENE: HAR1
Keywords HAR1 RNA, RNA GENE, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5UNE     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 47 1016 0
2  RNA    B 47 1016 0
3  Ligand   RNA (47-MER)  B 2 0 2
4 Water     15 0 15
total       111 2032 17

Nucleic acids
Unit 1 G1 G2 G3 A4 A5 A6 U7 G8 A9 U10 G11 G12 G13 C14 G15 U16 A17 G18 A19 C20 G21 C22 A23 C24 G25 U26 C27 A28 G29 C30 G31 G32 C33 G34 G35 A36 A37 A38 U39 G40 G41 U42 U43 U44 C45 C46 C47
Unit 2 G1 G2 G3 A4 A5 A6 U7 G8 A9 U10 G11 G12 G13 C14 G15 U16 A17 G18 A19 C20 G21 C22 A23 C24 G25 U26 C27 A28 G29 C30 G31 G32 C33 G34 G35 A36 A37 A38 U39 G40 G41 U42 U43 U44 C45 C46 C47

Ligands
Unit 3 MG101 MG102

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany