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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF S. POMBE UBA1 IN A CLOSED CONFORMATION
Keywords ROSSMANN-LIKE FOLD, UBIQUITIN-LIKE FOLD, UBIQUITIN ACTIVATIN ATP BINDING, LIGASE ACTIVITY, ATP/MG BINDING, UBIQUITIN E2 LIGASE, TRANSFERASE, LIGASE-LIGASE INHIBITOR COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5UM6     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   UBIQUITIN-ACTIVATING ENZYME E1 1  A 962 7551 0
2  Ligand   UBIQUITIN-ACTIVATING ENZYME E1 1  A 3 0 42
total       965 7551 42

Proteins
Unit 1 GLN37 SER38 ASN39 VAL40 LEU41 ILE42 ILE43 GLY44 CYS45 LYS46 GLY47 LEU48 GLY49 VAL50 GLU51 ILE52 ALA53 LYS54 ASN55 VAL56 CYS57 LEU58 ALA59 GLY60 VAL61 LYS62 SER63 VAL64 THR65 LEU66 TYR67 ASP68 PRO69 GLN70 PRO71 THR72 ARG73 ILE74 GLU75 ASP76 LEU77 SER78 SER79 GLN80 TYR81 PHE82 LEU83 THR84 GLU85 ASP86 ASP87 ILE88 GLY89 VAL90 PRO91 ARG92 ALA93 LYS94 VAL95 THR96 VAL97 SER98 LYS99 LEU100 ALA101 GLU102 LEU103 ASN104 GLN105 TYR106 VAL107 PRO108 VAL109 SER110 VAL111 VAL112 ASP113 GLU114 LEU115 SER116 THR117 GLU118 TYR119 LEU120 LYS121 ASN122 PHE123 LYS124 CYS125 VAL126 VAL127 VAL128 THR129 GLU130 THR131 SER132 LEU133 THR134 LYS135 GLN136 LEU137 GLU138 ILE139 ASN140 ASP141 PHE142 THR143 HIS144 LYS145 ASN146 HIS147 ILE148 ALA149 TYR150 ILE151 ALA152 ALA153 ASP154 SER155 ARG156 GLY157 LEU158 PHE159 GLY160 SER161 ILE162 PHE163 CYS164 ASP165 PHE166 GLY167 GLU168 ASN169 PHE170 ILE171 CYS172 THR173 ASP174 THR175 ASP176 GLY177 ASN178 GLU179 PRO180 LEU181 THR182 GLY183 MET184 ILE185 ALA186 SER187 ILE188 THR189 ASP190 ASP191 GLY192 VAL193 VAL194 THR195 MET196 LEU197 GLU198 GLU199 THR200 ARG201 HIS202 GLY203 LEU204 GLU205 ASN206 GLY207 ASP208 PHE209 VAL210 LYS211 PHE212 THR213 GLU214 VAL215 LYS216 GLY217 MET218 PRO219 GLY220 LEU221 ASN222 ASP223 GLY224 THR225 PRO226 ARG227 LYS228 VAL229 GLU230 VAL231 LYS232 GLY233 PRO234 TYR235 THR236 PHE237 SER238 ILE239 GLY240 SER241 VAL242 LYS243 ASP244 LEU245 GLY246 SER247 ALA248 GLY249 TYR250 ASN251 GLY252 VAL253 PHE254 THR255 GLN256 VAL257 LYS258 VAL259 PRO260 THR261 LYS262 ILE263 SER264 PHE265 LYS266 SER267 LEU268 ARG269 GLU270 SER271 LEU272 LYS273 ASP274 PRO275 GLU276 TYR277 VAL278 TYR279 PRO280 ASP281 PHE282 GLY283 LYS284 MET285 MET286 ARG287 PRO288 PRO289 GLN290 TYR291 HIS292 ILE293 ALA294 PHE295 GLN296 ALA297 LEU298 SER299 ALA300 PHE301 ALA302 ASP303 ALA304 HIS305 GLU306 GLY307 SER308 LEU309 PRO310 ARG311 PRO312 ARG313 ASN314 ASP315 ILE316 ASP317 ALA318 ALA319 GLU320 PHE321 PHE322 GLU323 PHE324 CYS325 LYS326 LYS327 ILE328 ALA329 SER330 THR331 LEU332 GLN333 PHE334 ASP335 VAL336 GLU337 LEU338 ASP339 GLU340 LYS341 LEU342 ILE343 LYS344 GLU345 ILE346 SER347 TYR348 GLN349 ALA350 ARG351 GLY352 ASP353 LEU354 VAL355 ALA356 MET357 SER358 ALA359 PHE360 LEU361 GLY362 GLY363 ALA364 VAL365 ALA366 GLN367 GLU368 VAL369 LEU370 LYS371 ALA372 THR373 THR374 SER375 LYS376 PHE377 TYR378 PRO379 LEU380 LYS381 GLN382 TYR383 PHE384 TYR385 PHE386 ASP387 SER388 LEU389 GLU390 SER391 LEU392 PRO393 SER394 SER395 VAL396 THR397 ILE398 SER399 GLU400 GLU401 THR402 CYS403 LYS404 PRO405 ARG406 GLY407 CYS408 ARG409 TYR410 ASP411 GLY412 GLN413 ILE414 ALA415 VAL416 PHE417 GLY418 SER419 GLU420 PHE421 GLN422 GLU423 LYS424 ILE425 ALA426 SER427 LEU428 SER429 THR430 PHE431 LEU432 VAL433 GLY434 ALA435 GLY436 ALA437 ILE438 GLY439 CYS440 GLU441 MET442 LEU443 LYS444 ASN445 TRP446 ALA447 MET448 MET449 GLY450 VAL451 ALA452 THR453 GLY454 GLU455 SER456 GLY457 HIS458 ILE459 SER460 VAL461 THR462 ASP463 MET464 ASP465 SER466 ILE467 GLU468 LYS469 SER470 ASN471 LEU472 ASN473 ARG474 GLN475 PHE476 LEU477 PHE478 ARG479 PRO480 ARG481 ASP482 VAL483 GLY484 LYS485 LEU486 LYS487 SER488 GLU489 CYS490 ALA491 SER492 THR493 ALA494 VAL495 SER496 ILE497 MET498 ASN499 PRO500 SER501 LEU502 THR503 GLY504 LYS505 ILE506 THR507 SER508 TYR509 GLN510 GLU511 ARG512 VAL513 GLY514 PRO515 GLU516 SER517 GLU518 GLY519 ILE520 PHE521 GLY522 ASP523 GLU524 PHE525 PHE526 GLU527 LYS528 LEU529 SER530 LEU531 VAL532 THR533 ASN534 ALA535 LEU536 ASP537 ASN538 VAL539 GLU540 ALA541 ARG542 MET543 TYR544 VAL545 ASP546 ARG547 ARG548 CYS549 VAL550 PHE551 PHE552 GLU553 LYS554 PRO555 LEU556 LEU557 GLU558 SER559 GLY560 THR561 LEU562 GLY563 THR564 LYS565 GLY566 ASN567 THR568 GLN569 VAL570 VAL571 VAL572 PRO573 HIS574 LEU575 THR576 GLU577 SER578 TYR579 GLY580 SER581 SER582 GLN583 ASP584 PRO585 PRO586 GLU587 LYS588 SER589 PHE590 PRO591 ILE592 ALA593 THR594 LEU595 LYS596 ASN597 PHE598 PRO599 ASN600 ARG601 ILE602 GLU603 HIS604 THR605 ILE606 ALA607 TRP608 ALA609 ARG610 ASP611 LEU612 PHE613 GLU614 GLY615 LEU616 PHE617 LYS618 GLN619 PRO620 ILE621 ASP622 ASN623 VAL624 ASN625 MET626 TYR627 LEU628 SER629 SER630 PRO631 ASN632 PHE633 LEU634 GLU635 THR636 SER637 LEU638 LYS639 THR640 SER641 SER642 ASN643 PRO644 ARG645 GLU646 VAL647 LEU648 GLU649 ASN650 ILE651 ARG652 ASP653 TYR654 LEU655 VAL656 THR657 GLU658 LYS659 PRO660 LEU661 SER662 PHE663 GLU664 GLU665 CYS666 ILE667 MET668 TRP669 ALA670 ARG671 LEU672 GLN673 PHE674 ASP675 LYS676 PHE677 PHE678 ASN679 ASN680 ASN681 ILE682 GLN683 GLN684 LEU685 LEU686 PHE687 ASN688 PHE689 PRO690 LYS691 ASP692 SER693 VAL694 THR695 SER696 THR697 GLY698 GLN699 PRO700 PHE701 TRP702 SER703 GLY704 PRO705 LYS706 ARG707 ALA708 PRO709 THR710 PRO711 LEU712 SER713 PHE714 ASP715 ILE716 HIS717 ASN718 ARG719 GLU720 HIS721 PHE722 ASP723 PHE724 ILE725 VAL726 ALA727 ALA728 ALA729 SER730 LEU731 TYR732 ALA733 PHE734 ASN735 TYR736 GLY737 LEU738 LYS739 SER740 GLU741 THR742 ASP743 PRO744 ALA745 ILE746 TYR747 GLU748 ARG749 VAL750 LEU751 ALA752 GLY753 TYR754 ASN755 PRO756 PRO757 PRO758 PHE759 ALA760 PRO761 LYS762 SER763 GLY764 ILE765 LYS766 ILE767 GLN768 VAL769 LYS784 GLN785 GLU786 LEU787 LYS788 SER789 ILE790 ALA791 ASP792 SER793 LEU794 PRO795 PRO796 PRO797 SER798 SER799 LEU800 VAL801 GLY802 PHE803 ARG804 LEU805 THR806 PRO807 ALA808 GLU809 PHE810 GLU811 LYS812 ASP813 ASP814 ASP815 SER816 ASN817 HIS818 HIS819 ILE820 ASP821 PHE822 ILE823 THR824 ALA825 ALA826 SER827 ASN828 LEU829 ARG830 ALA831 MET832 ASN833 TYR834 ASP835 ILE836 THR837 PRO838 ALA839 ASP840 ARG841 PHE842 LYS843 THR844 LYS845 PHE846 VAL847 ALA848 GLY849 LYS850 ILE851 VAL852 PRO853 ALA854 MET855 CYS856 THR857 SER858 THR859 ALA860 VAL861 VAL862 SER863 GLY864 LEU865 VAL866 CYS867 LEU868 GLU869 LEU870 VAL871 LYS872 LEU873 VAL874 ASP875 GLY876 LYS877 LYS878 LYS879 ILE880 GLU881 GLU882 TYR883 LYS884 ASN885 GLY886 PHE887 PHE888 ASN889 LEU890 ALA891 ILE892 GLY893 LEU894 PHE895 THR896 PHE897 SER898 ASP899 PRO900 ILE901 ALA902 SER903 PRO904 LYS905 MET906 LYS907 VAL908 ASN909 GLY910 LYS911 GLU912 ILE913 ASP914 LYS915 ILE916 TRP917 ASP918 ARG919 TYR920 ASN921 LEU922 PRO923 ASP924 CYS925 THR926 LEU927 GLN928 GLU929 LEU930 ILE931 ASP932 TYR933 PHE934 GLN935 LYS936 GLU937 GLU938 GLY939 LEU940 GLU941 VAL942 THR943 MET944 LEU945 SER946 SER947 GLY948 VAL949 SER950 LEU951 LEU952 TYR953 ALA954 ASN955 PHE956 GLN957 PRO958 PRO959 LYS960 LYS961 LEU962 ALA963 GLU964 ARG965 LEU966 PRO967 LEU968 LYS969 ILE970 SER971 GLU972 LEU973 VAL974 GLU975 GLN976 ILE977 THR978 LYS979 LYS980 LYS981 LEU982 GLU983 PRO984 PHE985 ARG986 LYS987 HIS988 LEU989 VAL990 LEU991 GLU992 ILE993 CYS994 CYS995 ASP996 ASP997 ALA998 ASN999 GLY1000 GLU1001 ASP1002 VAL1003 GLU1004 VAL1005 PRO1006 PHE1007 ILE1008 CYS1009 ILE1010 LYS1011 LEU1012

Ligands
Unit 2 SO41101 8EA1102 8E71103

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany