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Sequence, Chains, Asymmetric and Biological Units

Title VSV N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1004
Keywords VESICULAR STOMATITIS VIRUS, NUCLEOPROTEIN, INHIBITORY VHH, A VIRAL PROTEIN-RNA-IMMUNE SYSTEM COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5UKB     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ANTI-VESICULAR STOMATITIS VIRUS N VHH  d 122 946 0
2  Protein   NUCLEOCAPSID  D 419 3316 0
3  Protein   ANTI-VESICULAR STOMATITIS VIRUS N VHH  c 122 946 0
4  Protein   NUCLEOCAPSID  C 419 3316 0
5  Protein   ANTI-VESICULAR STOMATITIS VIRUS N VHH  b 122 946 0
6  Protein   NUCLEOCAPSID  B 419 3316 0
7  Protein   ANTI-VESICULAR STOMATITIS VIRUS N VHH  a 122 946 0
8  Protein   NUCLEOCAPSID  A 419 3316 0
9  Protein   ANTI-VESICULAR STOMATITIS VIRUS N VHH  e 122 946 0
10  Protein   NUCLEOCAPSID  E 419 3316 0
11  RNA    R 45 900 0
total       2750 22210 0
Proteins
Unit 1 GLN1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 ALA14 GLY15 GLY16 SER17 LEU18 THR19 LEU20 SER21 CYS22 VAL23 ALA24 SER25 GLY26 ARG27 PRO28 PHE29 ARG30 ASN31 TYR32 ARG33 LEU34 GLY35 TRP36 PHE37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLU44 ARG45 GLU46 PHE47 VAL48 ALA49 ALA50 ILE51 ASN52 TRP53 GLY54 GLY55 VAL56 ILE57 THR58 ASN59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASP74 ALA75 LYS76 ASN77 THR78 VAL79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 LYS87 PRO88 GLU89 GLU90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ALA98 PHE99 ASP100 SER101 THR102 GLY103 SER104 PRO105 ILE106 VAL107 ARG108 ASP109 ASN110 TYR111 GLU112 TYR113 TRP114 GLY115 GLN116 GLY117 THR118 GLN119 VAL120 THR121 VAL122
Unit 2 SER2 VAL3 THR4 VAL5 LYS6 ARG7 ILE8 ILE9 ASP10 ASN11 THR12 VAL13 ILE14 VAL15 PRO16 LYS17 LEU18 PRO19 ALA20 ASN21 GLU22 ASP23 PRO24 VAL25 GLU26 TYR27 PRO28 ALA29 ASP30 TYR31 PHE32 ARG33 LYS34 SER35 LYS36 GLU37 ILE38 PRO39 LEU40 TYR41 ILE42 ASN43 THR44 THR45 LYS46 SER47 LEU48 SER49 ASP50 LEU51 ARG52 GLY53 TYR54 VAL55 TYR56 GLN57 GLY58 LEU59 LYS60 SER61 GLY62 ASN63 VAL64 SER65 ILE66 ILE67 HIS68 VAL69 ASN70 SER71 TYR72 LEU73 TYR74 GLY75 ALA76 LEU77 LYS78 ASP79 ILE80 ARG81 GLY82 LYS83 LEU84 ASP85 LYS86 ASP87 TRP88 SER89 SER90 PHE91 GLY92 ILE93 ASN94 ILE95 GLY96 LYS97 ALA98 GLY99 ASP100 THR101 ILE102 GLY103 ILE104 PHE105 ASP106 LEU107 VAL108 SER109 LEU110 LYS111 ALA112 LEU113 ASP114 LEU117 PRO118 ASP119 GLY120 VAL121 SER122 ASP123 ALA124 SER125 ARG126 THR127 SER128 ALA129 ASP130 ASP131 LYS132 TRP133 LEU134 PRO135 LEU136 TYR137 LEU138 LEU139 GLY140 LEU141 TYR142 ARG143 VAL144 GLY145 ARG146 THR147 GLN148 MET149 PRO150 GLU151 TYR152 ARG153 LYS154 LYS155 LEU156 MET157 ASP158 GLY159 LEU160 THR161 ASN162 GLN163 CYS164 LYS165 MET166 ILE167 ASN168 GLU169 GLN170 PHE171 GLU172 PRO173 LEU174 VAL175 PRO176 GLU177 GLY178 ARG179 ASP180 ILE181 PHE182 ASP183 VAL184 TRP185 GLY186 ASN187 ASP188 SER189 ASN190 TYR191 THR192 LYS193 ILE194 VAL195 ALA196 ALA197 VAL198 ASP199 MET200 PHE201 PHE202 HIS203 MET204 PHE205 LYS206 LYS207 HIS208 GLU209 CYS210 ALA211 SER212 PHE213 ARG214 TYR215 GLY216 THR217 ILE218 VAL219 SER220 ARG221 PHE222 LYS223 ASP224 CYS225 ALA226 ALA227 LEU228 ALA229 THR230 PHE231 GLY232 HIS233 LEU234 CYS235 LYS236 ILE237 THR238 GLY239 MET240 SER241 THR242 GLU243 ASP244 VAL245 THR246 THR247 TRP248 ILE249 LEU250 ASN251 ARG252 GLU253 VAL254 ALA255 ASP256 GLU257 MET258 VAL259 GLN260 MET261 MET262 LEU263 PRO264 GLY265 GLN266 GLU267 ILE268 ASP269 LYS270 ALA271 ASP272 SER273 TYR274 MET275 PRO276 TYR277 LEU278 ILE279 ASP280 PHE281 GLY282 LEU283 SER284 SER285 LYS286 SER287 PRO288 TYR289 SER290 SER291 VAL292 LYS293 ASN294 PRO295 ALA296 PHE297 HIS298 PHE299 TRP300 GLY301 GLN302 LEU303 THR304 ALA305 LEU306 LEU307 LEU308 ARG309 SER310 THR311 ARG312 ALA313 ARG314 ASN315 ALA316 ARG317 GLN318 PRO319 ASP320 ASP321 ILE322 GLU323 TYR324 THR325 SER326 LEU327 THR328 THR329 ALA330 GLY331 LEU332 LEU333 TYR334 ALA335 TYR336 ALA337 VAL338 GLY339 SER340 SER341 ALA342 ASP343 LEU344 ALA345 GLN346 GLN347 PHE348 CYS349 VAL350 GLY351 ASP352 ASN353 LYS354 TYR355 THR356 PRO357 ASP358 ASP359 SER360 THR361 GLY362 GLY363 LEU364 THR365 THR366 ASN367 ALA368 PRO369 PRO370 GLN371 GLY372 ARG373 ASP374 VAL375 VAL376 GLU377 TRP378 LEU379 GLY380 TRP381 PHE382 GLU383 ASP384 GLN385 ASN386 ARG387 LYS388 PRO389 THR390 PRO391 ASP392 MET393 MET394 GLN395 TYR396 ALA397 LYS398 ARG399 ALA400 VAL401 MET402 SER403 LEU404 GLN405 GLY406 LEU407 ARG408 GLU409 LYS410 THR411 ILE412 GLY413 LYS414 TYR415 ALA416 LYS417 SER418 GLU419 PHE420 ASP421 LYS422
Unit 3 GLN1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 ALA14 GLY15 GLY16 SER17 LEU18 THR19 LEU20 SER21 CYS22 VAL23 ALA24 SER25 GLY26 ARG27 PRO28 PHE29 ARG30 ASN31 TYR32 ARG33 LEU34 GLY35 TRP36 PHE37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLU44 ARG45 GLU46 PHE47 VAL48 ALA49 ALA50 ILE51 ASN52 TRP53 GLY54 GLY55 VAL56 ILE57 THR58 ASN59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASP74 ALA75 LYS76 ASN77 THR78 VAL79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 LYS87 PRO88 GLU89 GLU90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ALA98 PHE99 ASP100 SER101 THR102 GLY103 SER104 PRO105 ILE106 VAL107 ARG108 ASP109 ASN110 TYR111 GLU112 TYR113 TRP114 GLY115 GLN116 GLY117 THR118 GLN119 VAL120 THR121 VAL122
Unit 4 SER2 VAL3 THR4 VAL5 LYS6 ARG7 ILE8 ILE9 ASP10 ASN11 THR12 VAL13 ILE14 VAL15 PRO16 LYS17 LEU18 PRO19 ALA20 ASN21 GLU22 ASP23 PRO24 VAL25 GLU26 TYR27 PRO28 ALA29 ASP30 TYR31 PHE32 ARG33 LYS34 SER35 LYS36 GLU37 ILE38 PRO39 LEU40 TYR41 ILE42 ASN43 THR44 THR45 LYS46 SER47 LEU48 SER49 ASP50 LEU51 ARG52 GLY53 TYR54 VAL55 TYR56 GLN57 GLY58 LEU59 LYS60 SER61 GLY62 ASN63 VAL64 SER65 ILE66 ILE67 HIS68 VAL69 ASN70 SER71 TYR72 LEU73 TYR74 GLY75 ALA76 LEU77 LYS78 ASP79 ILE80 ARG81 GLY82 LYS83 LEU84 ASP85 LYS86 ASP87 TRP88 SER89 SER90 PHE91 GLY92 ILE93 ASN94 ILE95 GLY96 LYS97 ALA98 GLY99 ASP100 THR101 ILE102 GLY103 ILE104 PHE105 ASP106 LEU107 VAL108 SER109 LEU110 LYS111 ALA112 LEU113 ASP114 LEU117 PRO118 ASP119 GLY120 VAL121 SER122 ASP123 ALA124 SER125 ARG126 THR127 SER128 ALA129 ASP130 ASP131 LYS132 TRP133 LEU134 PRO135 LEU136 TYR137 LEU138 LEU139 GLY140 LEU141 TYR142 ARG143 VAL144 GLY145 ARG146 THR147 GLN148 MET149 PRO150 GLU151 TYR152 ARG153 LYS154 LYS155 LEU156 MET157 ASP158 GLY159 LEU160 THR161 ASN162 GLN163 CYS164 LYS165 MET166 ILE167 ASN168 GLU169 GLN170 PHE171 GLU172 PRO173 LEU174 VAL175 PRO176 GLU177 GLY178 ARG179 ASP180 ILE181 PHE182 ASP183 VAL184 TRP185 GLY186 ASN187 ASP188 SER189 ASN190 TYR191 THR192 LYS193 ILE194 VAL195 ALA196 ALA197 VAL198 ASP199 MET200 PHE201 PHE202 HIS203 MET204 PHE205 LYS206 LYS207 HIS208 GLU209 CYS210 ALA211 SER212 PHE213 ARG214 TYR215 GLY216 THR217 ILE218 VAL219 SER220 ARG221 PHE222 LYS223 ASP224 CYS225 ALA226 ALA227 LEU228 ALA229 THR230 PHE231 GLY232 HIS233 LEU234 CYS235 LYS236 ILE237 THR238 GLY239 MET240 SER241 THR242 GLU243 ASP244 VAL245 THR246 THR247 TRP248 ILE249 LEU250 ASN251 ARG252 GLU253 VAL254 ALA255 ASP256 GLU257 MET258 VAL259 GLN260 MET261 MET262 LEU263 PRO264 GLY265 GLN266 GLU267 ILE268 ASP269 LYS270 ALA271 ASP272 SER273 TYR274 MET275 PRO276 TYR277 LEU278 ILE279 ASP280 PHE281 GLY282 LEU283 SER284 SER285 LYS286 SER287 PRO288 TYR289 SER290 SER291 VAL292 LYS293 ASN294 PRO295 ALA296 PHE297 HIS298 PHE299 TRP300 GLY301 GLN302 LEU303 THR304 ALA305 LEU306 LEU307 LEU308 ARG309 SER310 THR311 ARG312 ALA313 ARG314 ASN315 ALA316 ARG317 GLN318 PRO319 ASP320 ASP321 ILE322 GLU323 TYR324 THR325 SER326 LEU327 THR328 THR329 ALA330 GLY331 LEU332 LEU333 TYR334 ALA335 TYR336 ALA337 VAL338 GLY339 SER340 SER341 ALA342 ASP343 LEU344 ALA345 GLN346 GLN347 PHE348 CYS349 VAL350 GLY351 ASP352 ASN353 LYS354 TYR355 THR356 PRO357 ASP358 ASP359 SER360 THR361 GLY362 GLY363 LEU364 THR365 THR366 ASN367 ALA368 PRO369 PRO370 GLN371 GLY372 ARG373 ASP374 VAL375 VAL376 GLU377 TRP378 LEU379 GLY380 TRP381 PHE382 GLU383 ASP384 GLN385 ASN386 ARG387 LYS388 PRO389 THR390 PRO391 ASP392 MET393 MET394 GLN395 TYR396 ALA397 LYS398 ARG399 ALA400 VAL401 MET402 SER403 LEU404 GLN405 GLY406 LEU407 ARG408 GLU409 LYS410 THR411 ILE412 GLY413 LYS414 TYR415 ALA416 LYS417 SER418 GLU419 PHE420 ASP421 LYS422
Unit 5 GLN1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 ALA14 GLY15 GLY16 SER17 LEU18 THR19 LEU20 SER21 CYS22 VAL23 ALA24 SER25 GLY26 ARG27 PRO28 PHE29 ARG30 ASN31 TYR32 ARG33 LEU34 GLY35 TRP36 PHE37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLU44 ARG45 GLU46 PHE47 VAL48 ALA49 ALA50 ILE51 ASN52 TRP53 GLY54 GLY55 VAL56 ILE57 THR58 ASN59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASP74 ALA75 LYS76 ASN77 THR78 VAL79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 LYS87 PRO88 GLU89 GLU90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ALA98 PHE99 ASP100 SER101 THR102 GLY103 SER104 PRO105 ILE106 VAL107 ARG108 ASP109 ASN110 TYR111 GLU112 TYR113 TRP114 GLY115 GLN116 GLY117 THR118 GLN119 VAL120 THR121 VAL122
Unit 6 SER2 VAL3 THR4 VAL5 LYS6 ARG7 ILE8 ILE9 ASP10 ASN11 THR12 VAL13 ILE14 VAL15 PRO16 LYS17 LEU18 PRO19 ALA20 ASN21 GLU22 ASP23 PRO24 VAL25 GLU26 TYR27 PRO28 ALA29 ASP30 TYR31 PHE32 ARG33 LYS34 SER35 LYS36 GLU37 ILE38 PRO39 LEU40 TYR41 ILE42 ASN43 THR44 THR45 LYS46 SER47 LEU48 SER49 ASP50 LEU51 ARG52 GLY53 TYR54 VAL55 TYR56 GLN57 GLY58 LEU59 LYS60 SER61 GLY62 ASN63 VAL64 SER65 ILE66 ILE67 HIS68 VAL69 ASN70 SER71 TYR72 LEU73 TYR74 GLY75 ALA76 LEU77 LYS78 ASP79 ILE80 ARG81 GLY82 LYS83 LEU84 ASP85 LYS86 ASP87 TRP88 SER89 SER90 PHE91 GLY92 ILE93 ASN94 ILE95 GLY96 LYS97 ALA98 GLY99 ASP100 THR101 ILE102 GLY103 ILE104 PHE105 ASP106 LEU107 VAL108 SER109 LEU110 LYS111 ALA112 LEU113 ASP114 LEU117 PRO118 ASP119 GLY120 VAL121 SER122 ASP123 ALA124 SER125 ARG126 THR127 SER128 ALA129 ASP130 ASP131 LYS132 TRP133 LEU134 PRO135 LEU136 TYR137 LEU138 LEU139 GLY140 LEU141 TYR142 ARG143 VAL144 GLY145 ARG146 THR147 GLN148 MET149 PRO150 GLU151 TYR152 ARG153 LYS154 LYS155 LEU156 MET157 ASP158 GLY159 LEU160 THR161 ASN162 GLN163 CYS164 LYS165 MET166 ILE167 ASN168 GLU169 GLN170 PHE171 GLU172 PRO173 LEU174 VAL175 PRO176 GLU177 GLY178 ARG179 ASP180 ILE181 PHE182 ASP183 VAL184 TRP185 GLY186 ASN187 ASP188 SER189 ASN190 TYR191 THR192 LYS193 ILE194 VAL195 ALA196 ALA197 VAL198 ASP199 MET200 PHE201 PHE202 HIS203 MET204 PHE205 LYS206 LYS207 HIS208 GLU209 CYS210 ALA211 SER212 PHE213 ARG214 TYR215 GLY216 THR217 ILE218 VAL219 SER220 ARG221 PHE222 LYS223 ASP224 CYS225 ALA226 ALA227 LEU228 ALA229 THR230 PHE231 GLY232 HIS233 LEU234 CYS235 LYS236 ILE237 THR238 GLY239 MET240 SER241 THR242 GLU243 ASP244 VAL245 THR246 THR247 TRP248 ILE249 LEU250 ASN251 ARG252 GLU253 VAL254 ALA255 ASP256 GLU257 MET258 VAL259 GLN260 MET261 MET262 LEU263 PRO264 GLY265 GLN266 GLU267 ILE268 ASP269 LYS270 ALA271 ASP272 SER273 TYR274 MET275 PRO276 TYR277 LEU278 ILE279 ASP280 PHE281 GLY282 LEU283 SER284 SER285 LYS286 SER287 PRO288 TYR289 SER290 SER291 VAL292 LYS293 ASN294 PRO295 ALA296 PHE297 HIS298 PHE299 TRP300 GLY301 GLN302 LEU303 THR304 ALA305 LEU306 LEU307 LEU308 ARG309 SER310 THR311 ARG312 ALA313 ARG314 ASN315 ALA316 ARG317 GLN318 PRO319 ASP320 ASP321 ILE322 GLU323 TYR324 THR325 SER326 LEU327 THR328 THR329 ALA330 GLY331 LEU332 LEU333 TYR334 ALA335 TYR336 ALA337 VAL338 GLY339 SER340 SER341 ALA342 ASP343 LEU344 ALA345 GLN346 GLN347 PHE348 CYS349 VAL350 GLY351 ASP352 ASN353 LYS354 TYR355 THR356 PRO357 ASP358 ASP359 SER360 THR361 GLY362 GLY363 LEU364 THR365 THR366 ASN367 ALA368 PRO369 PRO370 GLN371 GLY372 ARG373 ASP374 VAL375 VAL376 GLU377 TRP378 LEU379 GLY380 TRP381 PHE382 GLU383 ASP384 GLN385 ASN386 ARG387 LYS388 PRO389 THR390 PRO391 ASP392 MET393 MET394 GLN395 TYR396 ALA397 LYS398 ARG399 ALA400 VAL401 MET402 SER403 LEU404 GLN405 GLY406 LEU407 ARG408 GLU409 LYS410 THR411 ILE412 GLY413 LYS414 TYR415 ALA416 LYS417 SER418 GLU419 PHE420 ASP421 LYS422
Unit 7 GLN1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 ALA14 GLY15 GLY16 SER17 LEU18 THR19 LEU20 SER21 CYS22 VAL23 ALA24 SER25 GLY26 ARG27 PRO28 PHE29 ARG30 ASN31 TYR32 ARG33 LEU34 GLY35 TRP36 PHE37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLU44 ARG45 GLU46 PHE47 VAL48 ALA49 ALA50 ILE51 ASN52 TRP53 GLY54 GLY55 VAL56 ILE57 THR58 ASN59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASP74 ALA75 LYS76 ASN77 THR78 VAL79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 LYS87 PRO88 GLU89 GLU90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ALA98 PHE99 ASP100 SER101 THR102 GLY103 SER104 PRO105 ILE106 VAL107 ARG108 ASP109 ASN110 TYR111 GLU112 TYR113 TRP114 GLY115 GLN116 GLY117 THR118 GLN119 VAL120 THR121 VAL122
Unit 8 SER2 VAL3 THR4 VAL5 LYS6 ARG7 ILE8 ILE9 ASP10 ASN11 THR12 VAL13 ILE14 VAL15 PRO16 LYS17 LEU18 PRO19 ALA20 ASN21 GLU22 ASP23 PRO24 VAL25 GLU26 TYR27 PRO28 ALA29 ASP30 TYR31 PHE32 ARG33 LYS34 SER35 LYS36 GLU37 ILE38 PRO39 LEU40 TYR41 ILE42 ASN43 THR44 THR45 LYS46 SER47 LEU48 SER49 ASP50 LEU51 ARG52 GLY53 TYR54 VAL55 TYR56 GLN57 GLY58 LEU59 LYS60 SER61 GLY62 ASN63 VAL64 SER65 ILE66 ILE67 HIS68 VAL69 ASN70 SER71 TYR72 LEU73 TYR74 GLY75 ALA76 LEU77 LYS78 ASP79 ILE80 ARG81 GLY82 LYS83 LEU84 ASP85 LYS86 ASP87 TRP88 SER89 SER90 PHE91 GLY92 ILE93 ASN94 ILE95 GLY96 LYS97 ALA98 GLY99 ASP100 THR101 ILE102 GLY103 ILE104 PHE105 ASP106 LEU107 VAL108 SER109 LEU110 LYS111 ALA112 LEU113 ASP114 LEU117 PRO118 ASP119 GLY120 VAL121 SER122 ASP123 ALA124 SER125 ARG126 THR127 SER128 ALA129 ASP130 ASP131 LYS132 TRP133 LEU134 PRO135 LEU136 TYR137 LEU138 LEU139 GLY140 LEU141 TYR142 ARG143 VAL144 GLY145 ARG146 THR147 GLN148 MET149 PRO150 GLU151 TYR152 ARG153 LYS154 LYS155 LEU156 MET157 ASP158 GLY159 LEU160 THR161 ASN162 GLN163 CYS164 LYS165 MET166 ILE167 ASN168 GLU169 GLN170 PHE171 GLU172 PRO173 LEU174 VAL175 PRO176 GLU177 GLY178 ARG179 ASP180 ILE181 PHE182 ASP183 VAL184 TRP185 GLY186 ASN187 ASP188 SER189 ASN190 TYR191 THR192 LYS193 ILE194 VAL195 ALA196 ALA197 VAL198 ASP199 MET200 PHE201 PHE202 HIS203 MET204 PHE205 LYS206 LYS207 HIS208 GLU209 CYS210 ALA211 SER212 PHE213 ARG214 TYR215 GLY216 THR217 ILE218 VAL219 SER220 ARG221 PHE222 LYS223 ASP224 CYS225 ALA226 ALA227 LEU228 ALA229 THR230 PHE231 GLY232 HIS233 LEU234 CYS235 LYS236 ILE237 THR238 GLY239 MET240 SER241 THR242 GLU243 ASP244 VAL245 THR246 THR247 TRP248 ILE249 LEU250 ASN251 ARG252 GLU253 VAL254 ALA255 ASP256 GLU257 MET258 VAL259 GLN260 MET261 MET262 LEU263 PRO264 GLY265 GLN266 GLU267 ILE268 ASP269 LYS270 ALA271 ASP272 SER273 TYR274 MET275 PRO276 TYR277 LEU278 ILE279 ASP280 PHE281 GLY282 LEU283 SER284 SER285 LYS286 SER287 PRO288 TYR289 SER290 SER291 VAL292 LYS293 ASN294 PRO295 ALA296 PHE297 HIS298 PHE299 TRP300 GLY301 GLN302 LEU303 THR304 ALA305 LEU306 LEU307 LEU308 ARG309 SER310 THR311 ARG312 ALA313 ARG314 ASN315 ALA316 ARG317 GLN318 PRO319 ASP320 ASP321 ILE322 GLU323 TYR324 THR325 SER326 LEU327 THR328 THR329 ALA330 GLY331 LEU332 LEU333 TYR334 ALA335 TYR336 ALA337 VAL338 GLY339 SER340 SER341 ALA342 ASP343 LEU344 ALA345 GLN346 GLN347 PHE348 CYS349 VAL350 GLY351 ASP352 ASN353 LYS354 TYR355 THR356 PRO357 ASP358 ASP359 SER360 THR361 GLY362 GLY363 LEU364 THR365 THR366 ASN367 ALA368 PRO369 PRO370 GLN371 GLY372 ARG373 ASP374 VAL375 VAL376 GLU377 TRP378 LEU379 GLY380 TRP381 PHE382 GLU383 ASP384 GLN385 ASN386 ARG387 LYS388 PRO389 THR390 PRO391 ASP392 MET393 MET394 GLN395 TYR396 ALA397 LYS398 ARG399 ALA400 VAL401 MET402 SER403 LEU404 GLN405 GLY406 LEU407 ARG408 GLU409 LYS410 THR411 ILE412 GLY413 LYS414 TYR415 ALA416 LYS417 SER418 GLU419 PHE420 ASP421 LYS422
Unit 9 GLN1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 ALA14 GLY15 GLY16 SER17 LEU18 THR19 LEU20 SER21 CYS22 VAL23 ALA24 SER25 GLY26 ARG27 PRO28 PHE29 ARG30 ASN31 TYR32 ARG33 LEU34 GLY35 TRP36 PHE37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLU44 ARG45 GLU46 PHE47 VAL48 ALA49 ALA50 ILE51 ASN52 TRP53 GLY54 GLY55 VAL56 ILE57 THR58 ASN59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASP74 ALA75 LYS76 ASN77 THR78 VAL79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 LYS87 PRO88 GLU89 GLU90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ALA98 PHE99 ASP100 SER101 THR102 GLY103 SER104 PRO105 ILE106 VAL107 ARG108 ASP109 ASN110 TYR111 GLU112 TYR113 TRP114 GLY115 GLN116 GLY117 THR118 GLN119 VAL120 THR121 VAL122
Unit 10 SER2 VAL3 THR4 VAL5 LYS6 ARG7 ILE8 ILE9 ASP10 ASN11 THR12 VAL13 ILE14 VAL15 PRO16 LYS17 LEU18 PRO19 ALA20 ASN21 GLU22 ASP23 PRO24 VAL25 GLU26 TYR27 PRO28 ALA29 ASP30 TYR31 PHE32 ARG33 LYS34 SER35 LYS36 GLU37 ILE38 PRO39 LEU40 TYR41 ILE42 ASN43 THR44 THR45 LYS46 SER47 LEU48 SER49 ASP50 LEU51 ARG52 GLY53 TYR54 VAL55 TYR56 GLN57 GLY58 LEU59 LYS60 SER61 GLY62 ASN63 VAL64 SER65 ILE66 ILE67 HIS68 VAL69 ASN70 SER71 TYR72 LEU73 TYR74 GLY75 ALA76 LEU77 LYS78 ASP79 ILE80 ARG81 GLY82 LYS83 LEU84 ASP85 LYS86 ASP87 TRP88 SER89 SER90 PHE91 GLY92 ILE93 ASN94 ILE95 GLY96 LYS97 ALA98 GLY99 ASP100 THR101 ILE102 GLY103 ILE104 PHE105 ASP106 LEU107 VAL108 SER109 LEU110 LYS111 ALA112 LEU113 ASP114 LEU117 PRO118 ASP119 GLY120 VAL121 SER122 ASP123 ALA124 SER125 ARG126 THR127 SER128 ALA129 ASP130 ASP131 LYS132 TRP133 LEU134 PRO135 LEU136 TYR137 LEU138 LEU139 GLY140 LEU141 TYR142 ARG143 VAL144 GLY145 ARG146 THR147 GLN148 MET149 PRO150 GLU151 TYR152 ARG153 LYS154 LYS155 LEU156 MET157 ASP158 GLY159 LEU160 THR161 ASN162 GLN163 CYS164 LYS165 MET166 ILE167 ASN168 GLU169 GLN170 PHE171 GLU172 PRO173 LEU174 VAL175 PRO176 GLU177 GLY178 ARG179 ASP180 ILE181 PHE182 ASP183 VAL184 TRP185 GLY186 ASN187 ASP188 SER189 ASN190 TYR191 THR192 LYS193 ILE194 VAL195 ALA196 ALA197 VAL198 ASP199 MET200 PHE201 PHE202 HIS203 MET204 PHE205 LYS206 LYS207 HIS208 GLU209 CYS210 ALA211 SER212 PHE213 ARG214 TYR215 GLY216 THR217 ILE218 VAL219 SER220 ARG221 PHE222 LYS223 ASP224 CYS225 ALA226 ALA227 LEU228 ALA229 THR230 PHE231 GLY232 HIS233 LEU234 CYS235 LYS236 ILE237 THR238 GLY239 MET240 SER241 THR242 GLU243 ASP244 VAL245 THR246 THR247 TRP248 ILE249 LEU250 ASN251 ARG252 GLU253 VAL254 ALA255 ASP256 GLU257 MET258 VAL259 GLN260 MET261 MET262 LEU263 PRO264 GLY265 GLN266 GLU267 ILE268 ASP269 LYS270 ALA271 ASP272 SER273 TYR274 MET275 PRO276 TYR277 LEU278 ILE279 ASP280 PHE281 GLY282 LEU283 SER284 SER285 LYS286 SER287 PRO288 TYR289 SER290 SER291 VAL292 LYS293 ASN294 PRO295 ALA296 PHE297 HIS298 PHE299 TRP300 GLY301 GLN302 LEU303 THR304 ALA305 LEU306 LEU307 LEU308 ARG309 SER310 THR311 ARG312 ALA313 ARG314 ASN315 ALA316 ARG317 GLN318 PRO319 ASP320 ASP321 ILE322 GLU323 TYR324 THR325 SER326 LEU327 THR328 THR329 ALA330 GLY331 LEU332 LEU333 TYR334 ALA335 TYR336 ALA337 VAL338 GLY339 SER340 SER341 ALA342 ASP343 LEU344 ALA345 GLN346 GLN347 PHE348 CYS349 VAL350 GLY351 ASP352 ASN353 LYS354 TYR355 THR356 PRO357 ASP358 ASP359 SER360 THR361 GLY362 GLY363 LEU364 THR365 THR366 ASN367 ALA368 PRO369 PRO370 GLN371 GLY372 ARG373 ASP374 VAL375 VAL376 GLU377 TRP378 LEU379 GLY380 TRP381 PHE382 GLU383 ASP384 GLN385 ASN386 ARG387 LYS388 PRO389 THR390 PRO391 ASP392 MET393 MET394 GLN395 TYR396 ALA397 LYS398 ARG399 ALA400 VAL401 MET402 SER403 LEU404 GLN405 GLY406 LEU407 ARG408 GLU409 LYS410 THR411 ILE412 GLY413 LYS414 TYR415 ALA416 LYS417 SER418 GLU419 PHE420 ASP421 LYS422
Nucleic acids
Unit 11 U1 U2 U3 U4 U5 U6 U7 U8 U9 U10 U11 U12 U13 U14 U15 U16 U17 U18 U19 U20 U21 U22 U23 U24 U25 U26 U27 U28 U29 U30 U31 U32 U33 U34 U35 U36 U37 U38 U39 U40 U41 U42 U43 U44 U45
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany