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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE CORE CATALYTIC DOMAIN OF HUMAN O-GL COMPLEXED WITH PUGNAC
Keywords HYDROLASE, O-GLCNACASE, GH84, ENZYME, PUGNAC
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5UHO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   O-GLCNACASE TIM-BARREL DOMAIN  A 304 2498 0
2  Protein   O-GLCNACASE STALK DOMAIN  B 120 970 0
3  Protein   O-GLCNACASE TIM-BARREL DOMAIN  C 302 2471 0
4  Protein   O-GLCNACASE STALK DOMAIN  D 120 973 0
5  Ligand   O-GLCNACASE TIM-BARREL DOMAIN  A 1 0 25
6  Ligand   O-GLCNACASE TIM-BARREL DOMAIN  C 1 0 25
7 Water     5 0 5
total       853 6912 55

Proteins
Unit 1 ARG58 ARG59 PHE60 LEU61 CYS62 GLY63 VAL64 VAL65 GLU66 GLY67 PHE68 TYR69 GLY70 ARG71 PRO72 TRP73 VAL74 MET75 GLU76 GLN77 ARG78 LYS79 GLU80 LEU81 PHE82 ARG83 ARG84 LEU85 GLN86 LYS87 TRP88 GLU89 LEU90 ASN91 THR92 TYR93 LEU94 TYR95 ALA96 PRO97 LYS98 ASP99 ASP100 TYR101 LYS102 HIS103 ARG104 MET105 PHE106 TRP107 ARG108 GLU109 MET110 TYR111 SER112 VAL113 GLU114 GLU115 ALA116 GLU117 GLN118 LEU119 MET120 THR121 LEU122 ILE123 SER124 ALA125 ALA126 ARG127 GLU128 TYR129 GLU130 ILE131 GLU132 PHE133 ILE134 TYR135 ALA136 ILE137 SER138 PRO139 GLY140 LEU141 ASP142 ILE143 THR144 PHE145 SER146 ASN147 PRO148 LYS149 GLU150 VAL151 SER152 THR153 LEU154 LYS155 ARG156 LYS157 LEU158 ASP159 GLN160 VAL161 SER162 GLN163 PHE164 GLY165 CYS166 ARG167 SER168 PHE169 ALA170 LEU171 LEU172 PHE173 ASP174 ASP175 ILE176 ASP177 HIS178 ASN179 MET180 CYS181 ALA182 ALA183 ASP184 LYS185 GLU186 VAL187 PHE188 SER189 SER190 PHE191 ALA192 HIS193 ALA194 GLN195 VAL196 SER197 ILE198 THR199 ASN200 GLU201 ILE202 TYR203 GLN204 TYR205 LEU206 GLY207 GLU208 PRO209 GLU210 THR211 PHE212 LEU213 PHE214 CYS215 PRO216 THR217 GLU218 TYR219 CYS220 GLY221 THR222 PHE223 CYS224 TYR225 PRO226 ASN227 VAL228 SER229 GLN230 SER231 PRO232 TYR233 LEU234 ARG235 THR236 VAL237 GLY238 GLU239 LYS240 LEU241 LEU242 PRO243 GLY244 ILE245 GLU246 VAL247 LEU248 TRP249 THR250 GLY251 PRO252 LYS253 VAL254 VAL255 SER256 LYS257 GLU258 ILE259 PRO260 VAL261 GLU262 SER263 ILE264 GLU265 GLU266 VAL267 SER268 LYS269 ILE270 ILE271 LYS272 ARG273 ALA274 PRO275 VAL276 ILE277 TRP278 ASP279 ASN280 ILE281 HIS282 ALA283 ASN284 ASP285 TYR286 ASP287 GLN288 LYS289 ARG290 LEU291 PHE292 LEU293 GLY294 PRO295 TYR296 LYS297 GLY298 ARG299 SER300 THR301 GLU302 LEU303 ILE304 PRO305 ARG306 LEU307 LYS308 GLY309 VAL310 LEU311 THR312 ASN313 PRO314 ASN315 CYS316 GLU317 PHE318 GLU319 ALA320 ASN321 TYR322 VAL323 ALA324 ILE325 HIS326 THR327 LEU328 ALA329 THR330 TRP331 TYR332 LYS333 SER334 ASN335 MET336 ASN337 GLY338 VAL339 ARG340 VAL372 LEU373 TYR374 SER375 PRO376 GLN377 MET378 ALA379 LEU380 LYS381 LEU382 ALA383 LEU384 THR385 GLU386 TRP387 LEU388 GLN389 GLU390 PHE391 GLY392
Unit 2 MET543 GLU544 LYS545 PRO546 LEU547 TYR548 THR549 ALA550 GLU551 PRO552 VAL553 THR554 LEU555 GLU556 ASP557 LEU558 GLN559 LEU560 LEU561 ALA562 ASP563 LEU564 PHE565 TYR566 LEU567 PRO568 TYR569 GLU570 HIS571 GLY572 PRO573 LYS574 GLY575 ALA576 GLN577 MET578 LEU579 ARG580 GLU581 PHE582 GLN583 TRP584 LEU585 ARG586 ALA587 ASN588 SER589 SER590 GLU606 TRP607 ARG608 SER609 ARG610 ALA611 ALA612 LYS613 PHE614 GLU615 GLU616 MET617 CYS618 GLY619 LEU620 VAL621 MET622 GLY623 MET624 PHE625 THR626 ARG627 LEU628 SER629 ASN630 CYS631 ALA632 ASN633 ARG634 THR635 ILE636 LEU637 TYR638 ASP639 MET640 TYR641 SER642 TYR643 VAL644 TRP645 ASP646 ILE647 LYS648 SER649 ILE650 MET651 SER652 MET653 VAL654 LYS655 SER656 PHE657 VAL658 GLN659 TRP660 LEU661 GLY662 CYS663 ARG664 ARG682 GLY683 GLY684 LEU685 ALA686 GLY687 GLU688 PHE689 GLN690 ARG691 LEU692 LEU693 PRO694
Unit 3 ARG58 ARG59 PHE60 LEU61 CYS62 GLY63 VAL64 VAL65 GLU66 GLY67 PHE68 TYR69 GLY70 ARG71 PRO72 TRP73 VAL74 MET75 GLU76 GLN77 ARG78 LYS79 GLU80 LEU81 PHE82 ARG83 ARG84 LEU85 GLN86 LYS87 TRP88 GLU89 LEU90 ASN91 THR92 TYR93 LEU94 TYR95 ALA96 PRO97 LYS98 ASP99 ASP100 TYR101 LYS102 HIS103 ARG104 MET105 PHE106 TRP107 ARG108 GLU109 MET110 TYR111 SER112 VAL113 GLU114 GLU115 ALA116 GLU117 GLN118 LEU119 MET120 THR121 LEU122 ILE123 SER124 ALA125 ALA126 ARG127 GLU128 TYR129 GLU130 ILE131 GLU132 PHE133 ILE134 TYR135 ALA136 ILE137 SER138 PRO139 GLY140 LEU141 ASP142 ILE143 THR144 PHE145 SER146 ASN147 PRO148 LYS149 GLU150 VAL151 SER152 THR153 LEU154 LYS155 ARG156 LYS157 LEU158 ASP159 GLN160 VAL161 SER162 GLN163 PHE164 GLY165 CYS166 ARG167 SER168 PHE169 ALA170 LEU171 LEU172 PHE173 ASP174 ASP175 ILE176 ASP177 HIS178 ASN179 MET180 CYS181 ALA182 ALA183 ASP184 LYS185 GLU186 VAL187 PHE188 SER189 SER190 PHE191 ALA192 HIS193 ALA194 GLN195 VAL196 SER197 ILE198 THR199 ASN200 GLU201 ILE202 TYR203 GLN204 TYR205 LEU206 GLY207 GLU208 PRO209 GLU210 THR211 PHE212 LEU213 PHE214 CYS215 PRO216 THR217 GLU218 TYR219 CYS220 GLY221 THR222 PHE223 CYS224 TYR225 PRO226 ASN227 VAL228 SER229 GLN230 SER231 PRO232 TYR233 LEU234 ARG235 THR236 VAL237 GLY238 GLU239 LYS240 LEU241 LEU242 PRO243 GLY244 ILE245 GLU246 VAL247 LEU248 TRP249 THR250 GLY251 PRO252 LYS253 VAL254 VAL255 SER256 LYS257 GLU258 ILE259 PRO260 VAL261 GLU262 SER263 ILE264 GLU265 GLU266 VAL267 SER268 LYS269 ILE270 ILE271 LYS272 ARG273 ALA274 PRO275 VAL276 ILE277 TRP278 ASP279 ASN280 ILE281 HIS282 ALA283 ASN284 ASP285 TYR286 ASP287 GLN288 LYS289 ARG290 LEU291 PHE292 LEU293 GLY294 PRO295 TYR296 LYS297 GLY298 ARG299 SER300 THR301 GLU302 LEU303 ILE304 PRO305 ARG306 LEU307 LYS308 GLY309 VAL310 LEU311 THR312 ASN313 PRO314 ASN315 CYS316 GLU317 PHE318 GLU319 ALA320 ASN321 TYR322 VAL323 ALA324 ILE325 HIS326 THR327 LEU328 ALA329 THR330 TRP331 TYR332 LYS333 SER334 ASN335 MET336 ASN337 GLY338 VAL372 LEU373 TYR374 SER375 PRO376 GLN377 MET378 ALA379 LEU380 LYS381 LEU382 ALA383 LEU384 THR385 GLU386 TRP387 LEU388 GLN389 GLU390 PHE391 GLY392
Unit 4 MET543 GLU544 LYS545 PRO546 LEU547 TYR548 THR549 ALA550 GLU551 PRO552 VAL553 THR554 LEU555 GLU556 ASP557 LEU558 GLN559 LEU560 LEU561 ALA562 ASP563 LEU564 PHE565 TYR566 LEU567 PRO568 TYR569 GLU570 HIS571 GLY572 PRO573 LYS574 GLY575 ALA576 GLN577 MET578 LEU579 ARG580 GLU581 PHE582 GLN583 TRP584 LEU585 ARG586 ALA587 ASN588 SER589 ILE604 GLU605 GLU606 TRP607 ARG608 SER609 ARG610 ALA611 ALA612 LYS613 PHE614 GLU615 GLU616 MET617 CYS618 GLY619 LEU620 VAL621 MET622 GLY623 MET624 PHE625 THR626 ARG627 LEU628 SER629 ASN630 CYS631 ALA632 ASN633 ARG634 THR635 ILE636 LEU637 TYR638 ASP639 MET640 TYR641 SER642 TYR643 VAL644 TRP645 ASP646 ILE647 LYS648 SER649 ILE650 MET651 SER652 MET653 VAL654 LYS655 SER656 PHE657 VAL658 GLN659 TRP660 LEU661 GLY662 CYS663 ARG682 GLY683 GLY684 LEU685 ALA686 GLY687 GLU688 PHE689 GLN690 ARG691 LEU692 LEU693 PRO694

Ligands
Unit 5 OAN501
Unit 6 OAN501

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany