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Sequence, Chains, Asymmetric and Biological Units

Title IFIT1 MONOMERIC MUTANT (L457E/L464E) WITH PPP-AAAA
Keywords MRNA CAP, TRIPHOSPHATE RNA, TETRATRICOPEPTIDE REPEAT, RNA BI PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE 1  A 461 7530 0
2  RNA    B 4 100 42
3  Ligand   INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE 1  A 6 0 77
4 Water     335 0 335
total       806 7630 454

Proteins
Unit 1 HIS8 GLN9 VAL10 LYS11 ASP12 SER13 LEU14 GLU15 GLN16 LEU17 ARG18 CYS19 HIS20 PHE21 THR22 TRP23 GLU24 LEU25 SER26 ILE27 ASP28 ASP29 ASP30 GLU31 MET32 PRO33 ASP34 LEU35 GLU36 ASN37 ARG38 VAL39 LEU40 ASP41 GLN42 ILE43 GLU44 PHE45 LEU46 ASP47 THR48 LYS49 TYR50 SER51 VAL52 GLY53 ILE54 HIS55 ASN56 LEU57 LEU58 ALA59 TYR60 VAL61 LYS62 HIS63 LEU64 LYS65 GLY66 GLN67 ASN68 GLU69 GLU70 ALA71 LEU72 LYS73 SER74 LEU75 LYS76 GLU77 ALA78 GLU79 ASN80 LEU81 MET82 GLN83 GLU84 GLU85 HIS86 ASP87 ASN88 GLN89 ALA90 ASN91 VAL92 ARG93 SER94 LEU95 VAL96 THR97 TRP98 GLY99 ASN100 PHE101 ALA102 TRP103 MET104 TYR105 TYR106 HIS107 MET108 GLY109 ARG110 LEU111 ALA112 GLU113 ALA114 GLN115 THR116 TYR117 LEU118 ASP119 LYS120 VAL121 GLU122 ASN123 ILE124 CYS125 LYS126 LYS127 LEU128 SER129 ASN130 PRO131 PHE132 ARG133 TYR134 ARG135 MET136 GLU137 CYS138 PRO139 GLU140 ILE141 ASP142 CYS143 GLU144 GLU145 GLY146 TRP147 ALA148 LEU149 LEU150 LYS151 CYS152 GLY153 GLY154 LYS155 ASN156 TYR157 GLU158 ARG159 ALA160 LYS161 ALA162 CYS163 PHE164 GLU165 LYS166 VAL167 LEU168 GLU169 VAL170 ASP171 PRO172 GLU173 ASN174 PRO175 GLU176 SER177 SER178 ALA179 GLY180 TYR181 ALA182 ILE183 SER184 ALA185 TYR186 ARG187 LEU188 ASP189 GLY190 PHE191 LYS192 LEU193 ALA194 THR195 LYS196 ASN197 HIS198 LYS199 PRO200 PHE201 SER202 LEU203 LEU204 PRO205 LEU206 ARG207 GLN208 ALA209 VAL210 ARG211 LEU212 ASN213 PRO214 ASP215 ASN216 GLY217 TYR218 ILE219 LYS220 VAL221 LEU222 LEU223 ALA224 LEU225 LYS226 LEU227 GLN228 ASP229 GLU230 GLY231 GLN232 GLU233 ALA234 GLU235 GLY236 GLU237 LYS238 TYR239 ILE240 GLU241 GLU242 ALA243 LEU244 ALA245 ASN246 MET247 SER248 SER249 GLN250 THR251 TYR252 VAL253 PHE254 ARG255 TYR256 ALA257 ALA258 LYS259 PHE260 TYR261 ARG262 ARG263 LYS264 GLY265 SER266 VAL267 ASP268 LYS269 ALA270 LEU271 GLU272 LEU273 LEU274 LYS275 LYS276 ALA277 LEU278 GLN279 GLU280 THR281 PRO282 THR283 SER284 VAL285 LEU286 LEU287 HIS288 HIS289 GLN290 ILE291 GLY292 LEU293 CYS294 TYR295 LYS296 ALA297 GLN298 MET299 ILE300 GLN301 ILE302 LYS303 GLU304 ALA305 THR306 LYS307 GLY308 GLN309 PRO310 ARG311 GLY312 GLN313 ASN314 ARG315 GLU316 LYS317 LEU318 ASP319 LYS320 MET321 ILE322 ARG323 SER324 ALA325 ILE326 PHE327 HIS328 PHE329 GLU330 SER331 ALA332 VAL333 GLU334 LYS335 LYS336 PRO337 THR338 PHE339 GLU340 VAL341 ALA342 HIS343 LEU344 ASP345 LEU346 ALA347 ARG348 MET349 TYR350 ILE351 GLU352 ALA353 GLY354 ASN355 HIS356 ARG357 LYS358 ALA359 GLU360 GLU361 ASN362 PHE363 GLN364 LYS365 LEU366 LEU367 CYS368 MET369 LYS370 PRO371 VAL372 VAL373 GLU374 GLU375 THR376 MET377 GLN378 ASP379 ILE380 HIS381 PHE382 HIS383 TYR384 GLY385 ARG386 PHE387 GLN388 GLU389 PHE390 GLN391 LYS392 LYS393 SER394 ASP395 VAL396 ASN397 ALA398 ILE399 ILE400 HIS401 TYR402 LEU403 LYS404 ALA405 ILE406 LYS407 ILE408 GLU409 GLN410 ALA411 SER412 LEU413 THR414 ARG415 ASP416 LYS417 SER418 ILE419 ASN420 SER421 LEU422 LYS423 LYS424 LEU425 VAL426 LEU427 ARG428 LYS429 LEU430 ARG431 ARG432 LYS433 ALA434 LEU435 ASP436 LEU437 GLU438 SER439 LEU440 SER441 LEU442 LEU443 GLY444 PHE445 VAL446 TYR447 LYS448 LEU449 GLU450 GLY451 ASN452 MET453 ASN454 GLU455 ALA456 GLU457 GLU458 TYR459 TYR460 GLU461 ARG462 ALA463 GLU464 ARG465 LEU466 ALA467 ALA468

Nucleic acids
Unit 2 ATP1 A2 A3 A4

Ligands
Unit 3 PGE501 PEG502 EDO503 PGE504 CA505 CA506

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany