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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE SHARK TBC1D15 GAP DOMAIN
Keywords SHARK (CHILOSCYLLIUM PLAGIOSUM), TBC1D15, GAP (GTPASE-ACTIVA PROTEIN), GTPASE, PROTEIN BINDING, HYDROLASE ACTIVATOR
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5TUB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SHARK TBC1D15 GTPASE-ACTIVATING PROTEIN  A 335 2807 0
2  Protein   SHARK TBC1D15 GTPASE-ACTIVATING PROTEIN  B 334 2798 0
3  Protein   SHARK TBC1D15 GTPASE-ACTIVATING PROTEIN  C 330 2759 0
4  Protein   SHARK TBC1D15 GTPASE-ACTIVATING PROTEIN  D 333 2784 0
5 Water     83 0 83
total       1415 11148 83

Proteins
Unit 1 PHE317 GLU318 VAL319 ILE320 THR321 ARG322 ILE323 ASP324 LEU325 GLY326 ILE327 ARG328 PRO329 GLU330 ILE331 GLN332 ARG333 GLY334 GLU335 PRO336 VAL337 SER338 ILE339 GLU340 ARG341 TRP342 SER343 GLN344 CYS345 MET346 ASP347 ALA348 GLU349 GLY350 LYS351 VAL352 LEU353 ASP354 PRO355 GLU356 ASN357 VAL358 LYS359 LYS360 LEU361 ILE362 PHE363 ARG364 GLY365 GLY366 LEU367 CYS368 HIS369 ALA370 VAL371 ARG372 LYS373 LEU374 THR375 TRP376 LYS377 PHE378 LEU379 LEU380 ASN381 TYR382 PHE383 PRO384 TRP385 ASP386 SER387 SER388 LYS389 GLU390 ASP391 ARG392 ARG393 LEU394 LEU395 ILE396 LYS397 ARG398 LYS399 THR400 ASP401 GLU402 TYR403 PHE404 ARG405 MET406 LYS407 LEU408 GLN409 TRP410 LYS411 SER412 VAL413 SER414 GLU415 GLU416 GLN417 GLU418 LYS419 ARG420 ASN421 THR422 ARG423 LEU424 LYS425 ASP426 TYR427 LYS428 SER429 LEU430 ILE431 GLU432 LYS433 ASP434 VAL435 ASN436 ARG437 THR438 ASP439 ARG440 THR441 ASN442 PRO443 PHE444 TYR445 GLU446 GLY447 HIS448 GLU449 ASN450 PRO451 GLY452 LEU453 ILE454 LEU455 LEU456 HIS457 ASP458 ILE459 LEU460 MET461 THR462 TYR463 CYS464 MET465 TYR466 ASP467 PHE468 ASP469 LEU470 GLY471 TYR472 ILE473 GLN474 GLY475 MET476 SER477 ASP478 LEU479 LEU480 SER481 PRO482 ILE483 LEU484 TYR485 VAL486 MET487 GLU488 ASN489 GLU490 VAL491 ASP492 ALA493 PHE494 TRP495 CYS496 PHE497 VAL498 ALA499 PHE500 ILE501 GLU502 GLN503 MET504 HIS505 CYS506 ASN507 PHE508 GLU509 GLU510 GLN511 MET512 GLN513 GLY514 MET515 LYS516 THR517 GLU518 LEU519 SER520 GLN521 LEU522 SER523 THR524 LEU525 LEU526 LYS527 LEU528 LEU529 ASP530 LEU531 GLY532 PHE533 TRP534 ASN535 TYR536 LEU537 GLU538 SER539 GLN540 GLU541 SER542 GLY543 TYR544 LEU545 TYR546 PHE547 CYS548 PHE549 ARG550 TRP551 LEU552 LEU553 ILE554 ARG555 PHE556 LYS557 ARG558 GLU559 PHE560 ASN561 PHE562 GLN563 ASP564 THR565 LEU566 ARG567 LEU568 TRP569 GLU570 VAL571 MET572 TRP573 THR574 GLY575 LEU576 PRO577 CYS578 GLN579 ASN580 PHE581 HIS582 LEU583 LEU584 ILE585 CYS586 CYS587 ALA588 ILE589 LEU590 ASP591 SER592 GLU593 LYS594 GLN595 LYS596 ILE597 MET598 GLU599 ASN600 HIS601 TYR602 GLY603 PHE604 ASN605 GLU606 ILE607 LEU608 LYS609 HIS610 ILE611 ASN612 GLU613 LEU614 SER615 LEU616 LYS617 LEU618 ASP619 VAL620 GLU621 GLU622 VAL623 LEU624 CYS625 LYS626 ALA627 GLU628 ALA629 ILE630 TYR631 CYS632 GLN633 MET634 MET635 LYS636 CYS637 LYS638 ASP639 LEU640 PRO641 GLN642 ALA643 VAL644 GLY645 GLU646 ILE647 LEU648 GLY649 LEU650 LYS651
Unit 2 PHE317 GLU318 VAL319 ILE320 THR321 ARG322 ILE323 ASP324 LEU325 GLY326 ILE327 ARG328 PRO329 GLU330 ILE331 GLN332 ARG333 GLY334 GLU335 PRO336 VAL337 SER338 ILE339 GLU340 ARG341 TRP342 SER343 GLN344 CYS345 MET346 ASP347 ALA348 GLU349 GLY350 LYS351 VAL352 LEU353 ASP354 PRO355 GLU356 ASN357 VAL358 LYS359 LYS360 LEU361 ILE362 PHE363 ARG364 GLY365 GLY366 LEU367 CYS368 HIS369 ALA370 VAL371 ARG372 LYS373 LEU374 THR375 TRP376 LYS377 PHE378 LEU379 LEU380 ASN381 TYR382 PHE383 PRO384 TRP385 ASP386 SER387 SER388 LYS389 GLU390 ASP391 ARG392 ARG393 LEU394 LEU395 ILE396 LYS397 ARG398 LYS399 THR400 ASP401 GLU402 TYR403 PHE404 ARG405 MET406 LYS407 LEU408 GLN409 TRP410 LYS411 SER412 VAL413 SER414 GLU415 GLU416 GLN417 GLU418 LYS419 ARG420 ASN421 THR422 ARG423 LEU424 LYS425 ASP426 TYR427 LYS428 SER429 LEU430 ILE431 GLU432 LYS433 ASP434 VAL435 ASN436 ARG437 THR438 ASP439 ARG440 THR441 ASN442 PRO443 PHE444 TYR445 GLU446 GLY447 HIS448 GLU449 ASN450 PRO451 GLY452 LEU453 ILE454 LEU455 LEU456 HIS457 ASP458 ILE459 LEU460 MET461 THR462 TYR463 CYS464 MET465 TYR466 ASP467 PHE468 ASP469 LEU470 GLY471 TYR472 ILE473 GLN474 GLY475 MET476 SER477 ASP478 LEU479 LEU480 SER481 PRO482 ILE483 LEU484 TYR485 VAL486 MET487 GLU488 ASN489 GLU490 VAL491 ASP492 ALA493 PHE494 TRP495 CYS496 PHE497 VAL498 ALA499 PHE500 ILE501 GLU502 GLN503 MET504 HIS505 CYS506 ASN507 PHE508 GLU509 GLU510 GLN511 MET512 GLN513 GLY514 MET515 LYS516 THR517 GLU518 LEU519 SER520 GLN521 LEU522 SER523 THR524 LEU525 LEU526 LYS527 LEU528 LEU529 ASP530 LEU531 GLY532 PHE533 TRP534 ASN535 TYR536 LEU537 GLU538 SER539 GLN540 GLU541 SER542 GLY543 TYR544 LEU545 TYR546 PHE547 CYS548 PHE549 ARG550 TRP551 LEU552 LEU553 ILE554 ARG555 PHE556 LYS557 ARG558 GLU559 PHE560 ASN561 PHE562 GLN563 ASP564 THR565 LEU566 ARG567 LEU568 TRP569 GLU570 VAL571 MET572 TRP573 THR574 GLY575 LEU576 PRO577 CYS578 GLN579 ASN580 PHE581 HIS582 LEU583 LEU584 ILE585 CYS586 CYS587 ALA588 ILE589 LEU590 ASP591 SER592 GLU593 LYS594 GLN595 LYS596 ILE597 MET598 GLU599 ASN600 HIS601 TYR602 GLY603 PHE604 ASN605 GLU606 ILE607 LEU608 LYS609 HIS610 ILE611 ASN612 GLU613 LEU614 SER615 LEU616 LYS617 LEU618 ASP619 VAL620 GLU621 GLU622 VAL623 LEU624 CYS625 LYS626 ALA627 GLU628 ALA629 ILE630 TYR631 CYS632 GLN633 MET634 MET635 LYS636 CYS637 LYS638 ASP639 LEU640 PRO641 GLN642 ALA643 VAL644 GLY645 GLU646 ILE647 LEU648 GLY649 LEU650
Unit 3 ARG322 ILE323 ASP324 LEU325 GLY326 ILE327 ARG328 PRO329 GLU330 ILE331 GLN332 ARG333 GLY334 GLU335 PRO336 VAL337 SER338 ILE339 GLU340 ARG341 TRP342 SER343 GLN344 CYS345 MET346 ASP347 ALA348 GLU349 GLY350 LYS351 VAL352 LEU353 ASP354 PRO355 GLU356 ASN357 VAL358 LYS359 LYS360 LEU361 ILE362 PHE363 ARG364 GLY365 GLY366 LEU367 CYS368 HIS369 ALA370 VAL371 ARG372 LYS373 LEU374 THR375 TRP376 LYS377 PHE378 LEU379 LEU380 ASN381 TYR382 PHE383 PRO384 TRP385 ASP386 SER387 SER388 LYS389 GLU390 ASP391 ARG392 ARG393 LEU394 LEU395 ILE396 LYS397 ARG398 LYS399 THR400 ASP401 GLU402 TYR403 PHE404 ARG405 MET406 LYS407 LEU408 GLN409 TRP410 LYS411 SER412 VAL413 SER414 GLU415 GLU416 GLN417 GLU418 LYS419 ARG420 ASN421 THR422 ARG423 LEU424 LYS425 ASP426 TYR427 LYS428 SER429 LEU430 ILE431 GLU432 LYS433 ASP434 VAL435 ASN436 ARG437 THR438 ASP439 ARG440 THR441 ASN442 PRO443 PHE444 TYR445 GLU446 GLY447 HIS448 GLU449 ASN450 PRO451 GLY452 LEU453 ILE454 LEU455 LEU456 HIS457 ASP458 ILE459 LEU460 MET461 THR462 TYR463 CYS464 MET465 TYR466 ASP467 PHE468 ASP469 LEU470 GLY471 TYR472 ILE473 GLN474 GLY475 MET476 SER477 ASP478 LEU479 LEU480 SER481 PRO482 ILE483 LEU484 TYR485 VAL486 MET487 GLU488 ASN489 GLU490 VAL491 ASP492 ALA493 PHE494 TRP495 CYS496 PHE497 VAL498 ALA499 PHE500 ILE501 GLU502 GLN503 MET504 HIS505 CYS506 ASN507 PHE508 GLU509 GLU510 GLN511 MET512 GLN513 GLY514 MET515 LYS516 THR517 GLU518 LEU519 SER520 GLN521 LEU522 SER523 THR524 LEU525 LEU526 LYS527 LEU528 LEU529 ASP530 LEU531 GLY532 PHE533 TRP534 ASN535 TYR536 LEU537 GLU538 SER539 GLN540 GLU541 SER542 GLY543 TYR544 LEU545 TYR546 PHE547 CYS548 PHE549 ARG550 TRP551 LEU552 LEU553 ILE554 ARG555 PHE556 LYS557 ARG558 GLU559 PHE560 ASN561 PHE562 GLN563 ASP564 THR565 LEU566 ARG567 LEU568 TRP569 GLU570 VAL571 MET572 TRP573 THR574 GLY575 LEU576 PRO577 CYS578 GLN579 ASN580 PHE581 HIS582 LEU583 LEU584 ILE585 CYS586 CYS587 ALA588 ILE589 LEU590 ASP591 SER592 GLU593 LYS594 GLN595 LYS596 ILE597 MET598 GLU599 ASN600 HIS601 TYR602 GLY603 PHE604 ASN605 GLU606 ILE607 LEU608 LYS609 HIS610 ILE611 ASN612 GLU613 LEU614 SER615 LEU616 LYS617 LEU618 ASP619 VAL620 GLU621 GLU622 VAL623 LEU624 CYS625 LYS626 ALA627 GLU628 ALA629 ILE630 TYR631 CYS632 GLN633 MET634 MET635 LYS636 CYS637 LYS638 ASP639 LEU640 PRO641 GLN642 ALA643 VAL644 GLY645 GLU646 ILE647 LEU648 GLY649 LEU650 LYS651
Unit 4 GLU318 VAL319 ILE320 THR321 ARG322 ILE323 ASP324 LEU325 GLY326 ILE327 ARG328 PRO329 GLU330 ILE331 GLN332 ARG333 GLY334 GLU335 PRO336 VAL337 SER338 ILE339 GLU340 ARG341 TRP342 SER343 GLN344 CYS345 MET346 ASP347 ALA348 GLU349 GLY350 LYS351 VAL352 LEU353 ASP354 PRO355 GLU356 ASN357 VAL358 LYS359 LYS360 LEU361 ILE362 PHE363 ARG364 GLY365 GLY366 LEU367 CYS368 HIS369 ALA370 VAL371 ARG372 LYS373 LEU374 THR375 TRP376 LYS377 PHE378 LEU379 LEU380 ASN381 TYR382 PHE383 PRO384 TRP385 ASP386 SER387 SER388 LYS389 GLU390 ASP391 ARG392 ARG393 LEU394 LEU395 ILE396 LYS397 ARG398 LYS399 THR400 ASP401 GLU402 TYR403 PHE404 ARG405 MET406 LYS407 LEU408 GLN409 TRP410 LYS411 SER412 VAL413 SER414 GLU415 GLU416 GLN417 GLU418 LYS419 ARG420 ASN421 THR422 ARG423 LEU424 LYS425 ASP426 TYR427 LYS428 SER429 LEU430 ILE431 GLU432 LYS433 ASP434 VAL435 ASN436 ARG437 THR438 ASP439 ARG440 THR441 ASN442 PRO443 PHE444 TYR445 GLU446 GLY447 HIS448 GLU449 ASN450 PRO451 GLY452 LEU453 ILE454 LEU455 LEU456 HIS457 ASP458 ILE459 LEU460 MET461 THR462 TYR463 CYS464 MET465 TYR466 ASP467 PHE468 ASP469 LEU470 GLY471 TYR472 ILE473 GLN474 GLY475 MET476 SER477 ASP478 LEU479 LEU480 SER481 PRO482 ILE483 LEU484 TYR485 VAL486 MET487 GLU488 ASN489 GLU490 VAL491 ASP492 ALA493 PHE494 TRP495 CYS496 PHE497 VAL498 ALA499 PHE500 ILE501 GLU502 GLN503 MET504 HIS505 CYS506 ASN507 PHE508 GLU509 GLU510 GLN511 MET512 GLN513 GLY514 MET515 LYS516 THR517 GLU518 LEU519 SER520 GLN521 LEU522 SER523 THR524 LEU525 LEU526 LYS527 LEU528 LEU529 ASP530 LEU531 GLY532 PHE533 TRP534 ASN535 TYR536 LEU537 GLU538 SER539 GLN540 GLU541 SER542 GLY543 TYR544 LEU545 TYR546 PHE547 CYS548 PHE549 ARG550 TRP551 LEU552 LEU553 ILE554 ARG555 PHE556 LYS557 ARG558 GLU559 PHE560 ASN561 PHE562 GLN563 ASP564 THR565 LEU566 ARG567 LEU568 TRP569 GLU570 VAL571 MET572 TRP573 THR574 GLY575 LEU576 PRO577 CYS578 GLN579 ASN580 PHE581 HIS582 LEU583 LEU584 ILE585 CYS586 CYS587 ALA588 ILE589 LEU590 ASP591 SER592 GLU593 LYS594 GLN595 LYS596 ILE597 MET598 GLU599 ASN600 HIS601 TYR602 GLY603 PHE604 ASN605 GLU606 ILE607 LEU608 LYS609 HIS610 ILE611 ASN612 GLU613 LEU614 SER615 LEU616 LYS617 LEU618 ASP619 VAL620 GLU621 GLU622 VAL623 LEU624 CYS625 LYS626 ALA627 GLU628 ALA629 ILE630 TYR631 CYS632 GLN633 MET634 MET635 LYS636 CYS637 LYS638 ASP639 LEU640 PRO641 GLN642 ALA643 VAL644 GLY645 GLU646 ILE647 LEU648 GLY649 LEU650

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany