5TRD - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF RBKR (RIBOFLAVIN KINASE) FROM THERMOPLASMA ACID DETERMINED IN COMPLEX WITH CTP AND ITS COGNATE DNA OPERATOR
• Keywords: RIBFLAVIN KINASE, MARR TYPE REGULATORY DOMAIN, WINGED-HELIX- HELIX DOMAIN, TRANSFERASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5TRD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RIBOFLAVIN KINASE	A	219	1750	0
2	Protein	RIBOFLAVIN KINASE	B	215	1719	0
3	Other macromolecule		G	19	386	0
4	Other macromolecule		H	19	390	0
5	Ligand	RIBOFLAVIN KINASE	A	2	0	30
6	Ligand	RIBOFLAVIN KINASE	B	2	0	30
7	Water			395	0	395
total				871	4245	455

Proteins

Unit 1

ASP 5 GLN 6 TYR 7 TYR 8 ARG 9 ALA 10 ILE 11 LYS 12 LYS 13 ILE 14 LYS 15 GLU 16 ALA 17 ALA 18 GLU 19 ALA 20 SER 21 ASN 22 ARG 23 ALA 24 TYR 25 LEU 26 THR 27 SER 28 SER 29 LYS 30 LEU 31 ALA 32 ASP 33 MET 34 LEU 35 GLY 36 ILE 37 SER 38 GLN 39 GLN 40 SER 41 ALA 42 SER 43 ARG 44 ILE 45 ILE 46 ILE 47 ASP 48 LEU 49 GLU 50 LYS 51 ASN 52 GLY 53 TYR 54 ILE 55 THR 56 ARG 57 THR 58 VAL 59 THR 60 LYS 61 ARG 62 GLY 63 GLN 64 ILE 65 LEU 66 ASN 67 ILE 68 THR 69 GLU 70 LYS 71 GLY 72 LEU 73 ASP 74 VAL 75 LEU 76 TYR 77 THR 78 GLU 79 PHE 80 ALA 81 ASP 82 LEU 83 SER 84 ARG 85 ILE 86 LEU 87 ALA 88 ILE 89 LYS 90 ASN 91 ASN 92 VAL 93 VAL 94 ILE 95 THR 96 GLY 97 THR 98 VAL 99 THR 100 SER 101 GLY 102 MET 103 GLY 104 GLU 105 GLY 106 ARG 107 TYR 108 TYR 109 VAL 110 ALA 111 ARG 112 LYS 113 GLN 114 TYR 115 ILE 116 ILE 117 GLN 118 PHE 119 GLN 120 GLU 121 LYS 122 LEU 123 GLY 124 ILE 125 ILE 126 PRO 127 TYR 128 LEU 129 GLY 130 THR 131 LEU 132 ASN 133 ILE 134 LYS 135 VAL 136 ASP 137 GLN 138 ALA 139 SER 140 LEU 141 PRO 142 GLU 143 LEU 144 ARG 145 LYS 146 ILE 147 ARG 148 GLY 149 PHE 150 ARG 151 GLY 152 ILE 153 HIS 154 ILE 155 GLU 156 GLY 157 PHE 158 LYS 159 THR 160 GLU 161 ASP 162 ARG 163 THR 164 PHE 165 GLY 166 SER 167 VAL 168 LYS 169 ALA 170 PHE 171 PRO 172 ALA 173 LYS 174 ILE 175 GLN 176 ASN 177 ILE 178 PRO 179 CYS 180 PHE 181 VAL 182 ILE 183 MET 184 PRO 185 GLU 186 ARG 187 THR 188 VAL 189 TYR 190 THR 191 ASP 192 VAL 193 ILE 194 GLU 195 ILE 196 ILE 197 SER 198 ASP 199 LYS 200 TYR 201 LEU 202 ARG 203 GLU 204 GLU 205 ILE 206 ASN 207 LEU 208 HIS 209 ASP 210 GLY 211 ASP 212 ARG 213 VAL 214 SER 215 VAL 216 GLU 217 VAL 218 TYR 219 THR 220 GLU 221 GLY 222 HIS 223

Unit 2

TYR 7 TYR 8 ARG 9 ALA 10 ILE 11 LYS 12 LYS 13 ILE 14 LYS 15 GLU 16 ALA 17 ALA 18 GLU 19 ALA 20 SER 21 ASN 22 ARG 23 ALA 24 TYR 25 LEU 26 THR 27 SER 28 SER 29 LYS 30 LEU 31 ALA 32 ASP 33 MET 34 LEU 35 GLY 36 ILE 37 SER 38 GLN 39 GLN 40 SER 41 ALA 42 SER 43 ARG 44 ILE 45 ILE 46 ILE 47 ASP 48 LEU 49 GLU 50 LYS 51 ASN 52 GLY 53 TYR 54 ILE 55 THR 56 ARG 57 THR 58 VAL 59 THR 60 LYS 61 ARG 62 GLY 63 GLN 64 ILE 65 LEU 66 ASN 67 ILE 68 THR 69 GLU 70 LYS 71 GLY 72 LEU 73 ASP 74 VAL 75 LEU 76 TYR 77 THR 78 GLU 79 PHE 80 ALA 81 ASP 82 LEU 83 SER 84 ARG 85 ILE 86 LEU 87 ALA 88 ILE 89 LYS 90 ASN 91 ASN 92 VAL 93 VAL 94 ILE 95 THR 96 GLY 97 THR 98 VAL 99 THR 100 SER 101 GLY 102 MET 103 GLY 104 GLU 105 GLY 106 ARG 107 TYR 108 TYR 109 VAL 110 ALA 111 ARG 112 LYS 113 GLN 114 TYR 115 ILE 116 ILE 117 GLN 118 PHE 119 GLN 120 GLU 121 LYS 122 LEU 123 GLY 124 ILE 125 ILE 126 PRO 127 TYR 128 LEU 129 GLY 130 THR 131 LEU 132 ASN 133 ILE 134 LYS 135 VAL 136 ASP 137 GLN 138 ALA 139 SER 140 LEU 141 PRO 142 GLU 143 LEU 144 ARG 145 LYS 146 ILE 147 ARG 148 GLY 149 PHE 150 ARG 151 GLY 152 ILE 153 HIS 154 ILE 155 GLU 156 GLY 157 PHE 158 LYS 159 THR 160 GLU 161 ASP 162 ARG 163 THR 164 PHE 165 GLY 166 SER 167 VAL 168 LYS 169 ALA 170 PHE 171 PRO 172 ALA 173 LYS 174 ILE 175 GLN 176 ASN 177 ILE 178 PRO 179 CYS 180 PHE 181 VAL 182 ILE 183 MET 184 PRO 185 GLU 186 ARG 187 THR 188 VAL 189 TYR 190 THR 191 ASP 192 VAL 193 ILE 194 GLU 195 ILE 196 ILE 197 SER 198 ASP 199 LYS 200 TYR 201 LEU 202 ARG 203 GLU 204 GLU 205 ILE 206 ASN 207 LEU 208 HIS 209 ASP 210 GLY 211 ASP 212 ARG 213 VAL 214 SER 215 VAL 216 GLU 217 VAL 218 TYR 219 THR 220 GLU 221

Other macromolecules

Unit 3	DA 1 DT 2 DT 3 DA 4 DC 5 DT 6 DA 7 DA 8 DT 9 DT 10 DC 11 DA 12 DC 13 DG 14 DA 15 DG 16 DT 17 DA 18 DA 19
Unit 4	DT 1 DT 2 DT 3 DA 4 DC 5 DT 6 DC 7 DG 8 DT 9 DG 10 DA 11 DA 12 DT 13 DT 14 DA 15 DG 16 DT 17 DA 18 DA 19

Ligands

Unit 5	CTP 301 NA 302
Unit 6	CTP 301 NA 302