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Title | STRUCTURE OF RBKR (RIBOFLAVIN KINASE) FROM THERMOPLASMA ACID DETERMINED IN COMPLEX WITH CTP AND ITS COGNATE DNA OPERATOR | |
Keywords | RIBFLAVIN KINASE, MARR TYPE REGULATORY DOMAIN, WINGED-HELIX- HELIX DOMAIN, TRANSFERASE-DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 5TRD | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | RIBOFLAVIN KINASE | A | 219 | 1750 | 0 |
2 | Protein | RIBOFLAVIN KINASE | B | 215 | 1719 | 0 |
3 | Other macromolecule | G | 19 | 386 | 0 | |
4 | Other macromolecule | H | 19 | 390 | 0 | |
5 | Ligand | RIBOFLAVIN KINASE | A | 2 | 0 | 30 |
6 | Ligand | RIBOFLAVIN KINASE | B | 2 | 0 | 30 |
7 | Water | 395 | 0 | 395 | ||
total | 871 | 4245 | 455 |
Unit 1 | ASP5 GLN6 TYR7 TYR8 ARG9 ALA10 ILE11 LYS12 LYS13 ILE14 LYS15 GLU16 ALA17 ALA18 GLU19 ALA20 SER21 ASN22 ARG23 ALA24 TYR25 LEU26 THR27 SER28 SER29 LYS30 LEU31 ALA32 ASP33 MET34 LEU35 GLY36 ILE37 SER38 GLN39 GLN40 SER41 ALA42 SER43 ARG44 ILE45 ILE46 ILE47 ASP48 LEU49 GLU50 LYS51 ASN52 GLY53 TYR54 ILE55 THR56 ARG57 THR58 VAL59 THR60 LYS61 ARG62 GLY63 GLN64 ILE65 LEU66 ASN67 ILE68 THR69 GLU70 LYS71 GLY72 LEU73 ASP74 VAL75 LEU76 TYR77 THR78 GLU79 PHE80 ALA81 ASP82 LEU83 SER84 ARG85 ILE86 LEU87 ALA88 ILE89 LYS90 ASN91 ASN92 VAL93 VAL94 ILE95 THR96 GLY97 THR98 VAL99 THR100 SER101 GLY102 MET103 GLY104 GLU105 GLY106 ARG107 TYR108 TYR109 VAL110 ALA111 ARG112 LYS113 GLN114 TYR115 ILE116 ILE117 GLN118 PHE119 GLN120 GLU121 LYS122 LEU123 GLY124 ILE125 ILE126 PRO127 TYR128 LEU129 GLY130 THR131 LEU132 ASN133 ILE134 LYS135 VAL136 ASP137 GLN138 ALA139 SER140 LEU141 PRO142 GLU143 LEU144 ARG145 LYS146 ILE147 ARG148 GLY149 PHE150 ARG151 GLY152 ILE153 HIS154 ILE155 GLU156 GLY157 PHE158 LYS159 THR160 GLU161 ASP162 ARG163 THR164 PHE165 GLY166 SER167 VAL168 LYS169 ALA170 PHE171 PRO172 ALA173 LYS174 ILE175 GLN176 ASN177 ILE178 PRO179 CYS180 PHE181 VAL182 ILE183 MET184 PRO185 GLU186 ARG187 THR188 VAL189 TYR190 THR191 ASP192 VAL193 ILE194 GLU195 ILE196 ILE197 SER198 ASP199 LYS200 TYR201 LEU202 ARG203 GLU204 GLU205 ILE206 ASN207 LEU208 HIS209 ASP210 GLY211 ASP212 ARG213 VAL214 SER215 VAL216 GLU217 VAL218 TYR219 THR220 GLU221 GLY222 HIS223 |
Unit 2 | TYR7 TYR8 ARG9 ALA10 ILE11 LYS12 LYS13 ILE14 LYS15 GLU16 ALA17 ALA18 GLU19 ALA20 SER21 ASN22 ARG23 ALA24 TYR25 LEU26 THR27 SER28 SER29 LYS30 LEU31 ALA32 ASP33 MET34 LEU35 GLY36 ILE37 SER38 GLN39 GLN40 SER41 ALA42 SER43 ARG44 ILE45 ILE46 ILE47 ASP48 LEU49 GLU50 LYS51 ASN52 GLY53 TYR54 ILE55 THR56 ARG57 THR58 VAL59 THR60 LYS61 ARG62 GLY63 GLN64 ILE65 LEU66 ASN67 ILE68 THR69 GLU70 LYS71 GLY72 LEU73 ASP74 VAL75 LEU76 TYR77 THR78 GLU79 PHE80 ALA81 ASP82 LEU83 SER84 ARG85 ILE86 LEU87 ALA88 ILE89 LYS90 ASN91 ASN92 VAL93 VAL94 ILE95 THR96 GLY97 THR98 VAL99 THR100 SER101 GLY102 MET103 GLY104 GLU105 GLY106 ARG107 TYR108 TYR109 VAL110 ALA111 ARG112 LYS113 GLN114 TYR115 ILE116 ILE117 GLN118 PHE119 GLN120 GLU121 LYS122 LEU123 GLY124 ILE125 ILE126 PRO127 TYR128 LEU129 GLY130 THR131 LEU132 ASN133 ILE134 LYS135 VAL136 ASP137 GLN138 ALA139 SER140 LEU141 PRO142 GLU143 LEU144 ARG145 LYS146 ILE147 ARG148 GLY149 PHE150 ARG151 GLY152 ILE153 HIS154 ILE155 GLU156 GLY157 PHE158 LYS159 THR160 GLU161 ASP162 ARG163 THR164 PHE165 GLY166 SER167 VAL168 LYS169 ALA170 PHE171 PRO172 ALA173 LYS174 ILE175 GLN176 ASN177 ILE178 PRO179 CYS180 PHE181 VAL182 ILE183 MET184 PRO185 GLU186 ARG187 THR188 VAL189 TYR190 THR191 ASP192 VAL193 ILE194 GLU195 ILE196 ILE197 SER198 ASP199 LYS200 TYR201 LEU202 ARG203 GLU204 GLU205 ILE206 ASN207 LEU208 HIS209 ASP210 GLY211 ASP212 ARG213 VAL214 SER215 VAL216 GLU217 VAL218 TYR219 THR220 GLU221 |
Unit 3 | DA1 DT2 DT3 DA4 DC5 DT6 DA7 DA8 DT9 DT10 DC11 DA12 DC13 DG14 DA15 DG16 DT17 DA18 DA19 |
Unit 4 | DT1 DT2 DT3 DA4 DC5 DT6 DC7 DG8 DT9 DG10 DA11 DA12 DT13 DT14 DA15 DG16 DT17 DA18 DA19 |
Unit 5 | CTP301 NA302 |
Unit 6 | CTP301 NA302 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |