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Sequence, Chains, Asymmetric and Biological Units

Title GASDERMIN-B C-TERMINAL DOMAIN CONTAINING THE POLYMORPHISM RE ARG299:SER306 FUSED TO MALTOSE BINDING PROTEIN
Keywords ALPHA HELICES, FUSION PROTEIN, C-TERMINAL DOMAIN, 2 SNPS, LI BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5TIB     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SUGAR ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN,G B  A 533 4056 0
2  Protein   SUGAR ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN,G B  B 530 3845 0
3  Ligand    C 2 0 23
4  Ligand    D 2 0 23
5  Ligand   SUGAR ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN,G B  A 2 0 5
6 Water     286 0 286
total       1355 7901 337
Proteins
Unit 1 LYS1 ILE2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ALA82 ALA83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA172 ALA173 GLY174 LYS175 TYR176 ASP177 ILE178 LYS179 ASP180 VAL181 GLY182 VAL183 ASP184 ASN185 ALA186 GLY187 ALA188 LYS189 ALA190 GLY191 LEU192 THR193 PHE194 LEU195 VAL196 ASP197 LEU198 ILE199 LYS200 ASN201 LYS202 HIS203 MET204 ASN205 ALA206 ASP207 THR208 ASP209 TYR210 SER211 ILE212 ALA213 GLU214 ALA215 ALA216 PHE217 ASN218 LYS219 GLY220 GLU221 THR222 ALA223 MET224 THR225 ILE226 ASN227 GLY228 PRO229 TRP230 ALA231 TRP232 SER233 ASN234 ILE235 ASP236 THR237 SER238 ALA239 VAL240 ASN241 TYR242 GLY243 VAL244 THR245 VAL246 LEU247 PRO248 THR249 PHE250 LYS251 GLY252 GLN253 PRO254 SER255 LYS256 PRO257 PHE258 VAL259 GLY260 VAL261 LEU262 SER263 ALA264 GLY265 ILE266 ASN267 ALA268 ALA269 SER270 PRO271 ASN272 LYS273 GLU274 LEU275 ALA276 LYS277 GLU278 PHE279 LEU280 GLU281 ASN282 TYR283 LEU284 LEU285 THR286 ASP287 GLU288 GLY289 LEU290 GLU291 ALA292 VAL293 ASN294 LYS295 ASP296 LYS297 PRO298 LEU299 GLY300 ALA301 VAL302 ALA303 LEU304 LYS305 SER306 TYR307 GLU308 GLU309 GLU310 LEU311 ALA312 LYS313 ASP314 PRO315 ARG316 ILE317 ALA318 ALA319 THR320 MET321 GLU322 ASN323 ALA324 GLN325 LYS326 GLY327 GLU328 ILE329 MET330 PRO331 ASN332 ILE333 PRO334 GLN335 MET336 SER337 ALA338 PHE339 TRP340 TYR341 ALA342 VAL343 ARG344 THR345 ALA346 VAL347 ILE348 ASN349 ALA350 ALA351 SER352 GLY353 ARG354 GLN355 THR356 VAL357 ASP358 ALA359 ALA360 LEU361 ALA362 ALA363 ALA364 GLN365 THR366 ASN367 ALA368 ALA369 ALA370 MET1220 SER1221 ALA1222 GLY1223 LEU1224 ASP1225 ILE1226 HIS1227 PHE1228 ARG1229 GLY1230 LYS1231 THR1232 LYS1233 SER1246 ARG1247 ASN1248 MET1249 LYS1250 GLU1251 LYS1252 LEU1253 GLU1254 ASP1255 MET1256 GLU1257 SER1258 VAL1259 LEU1260 LYS1261 ASP1262 LEU1263 THR1264 GLU1265 GLU1266 LYS1267 ARG1268 LYS1269 ASP1270 VAL1271 LEU1272 ASN1273 SER1274 LEU1275 ALA1276 LYS1277 CYS1278 LEU1279 GLY1280 LYS1281 GLU1282 ASP1283 ILE1284 ARG1285 GLN1286 ASP1287 LEU1288 GLU1289 GLN1290 ARG1291 VAL1292 SER1293 GLU1294 VAL1295 LEU1296 ILE1297 SER1298 ARG1299 GLU1300 LEU1301 HIS1302 MET1303 GLU1304 ASP1305 SER1306 ASP1307 LYS1308 PRO1309 LEU1310 LEU1311 SER1312 SER1313 LEU1314 PHE1315 ASN1316 ALA1317 ALA1318 GLY1319 VAL1320 LEU1321 VAL1322 GLU1323 ALA1324 ARG1325 ALA1326 LYS1327 ALA1328 ILE1329 LEU1330 ASP1331 PHE1332 LEU1333 ASP1334 ALA1335 LEU1336 LEU1337 GLU1338 LEU1339 SER1340 GLU1341 GLU1342 GLN1343 GLN1344 PHE1345 VAL1346 ALA1347 GLU1348 ALA1349 LEU1350 GLU1351 LYS1352 GLY1353 THR1354 LEU1355 PRO1356 LEU1357 LEU1358 LYS1359 ASP1360 GLN1361 VAL1362 LYS1363 SER1364 VAL1365 MET1366 GLU1367 GLN1368 ASN1369 TRP1370 ASP1383 PRO1384 GLU1385 ALA1386 ARG1387 ILE1388 LEU1389 CYS1390 ALA1391 LEU1392 TYR1393 VAL1394 VAL1395 VAL1396 SER1397 ILE1398 LEU1399 LEU1400 GLU1401 LEU1402 ALA1403 GLU1404 GLY1405 PRO1406
Unit 2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ALA82 ALA83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA172 ALA173 GLY174 LYS175 TYR176 ASP177 ILE178 LYS179 ASP180 VAL181 GLY182 VAL183 ASP184 ASN185 ALA186 GLY187 ALA188 LYS189 ALA190 GLY191 LEU192 THR193 PHE194 LEU195 VAL196 ASP197 LEU198 ILE199 LYS200 ASN201 LYS202 HIS203 MET204 ASN205 ALA206 ASP207 THR208 ASP209 TYR210 SER211 ILE212 ALA213 GLU214 ALA215 ALA216 PHE217 ASN218 LYS219 GLY220 GLU221 THR222 ALA223 MET224 THR225 ILE226 ASN227 GLY228 PRO229 TRP230 ALA231 TRP232 SER233 ASN234 ILE235 ASP236 THR237 SER238 ALA239 VAL240 ASN241 TYR242 GLY243 VAL244 THR245 VAL246 LEU247 PRO248 THR249 PHE250 LYS251 GLY252 GLN253 PRO254 SER255 LYS256 PRO257 PHE258 VAL259 GLY260 VAL261 LEU262 SER263 ALA264 GLY265 ILE266 ASN267 ALA268 ALA269 SER270 PRO271 ASN272 LYS273 GLU274 LEU275 ALA276 LYS277 GLU278 PHE279 LEU280 GLU281 ASN282 TYR283 LEU284 LEU285 THR286 ASP287 GLU288 GLY289 LEU290 GLU291 ALA292 VAL293 ASN294 LYS295 ASP296 LYS297 PRO298 LEU299 GLY300 ALA301 VAL302 ALA303 LEU304 LYS305 SER306 TYR307 GLU308 GLU309 GLU310 LEU311 ALA312 LYS313 ASP314 PRO315 ARG316 ILE317 ALA318 ALA319 THR320 MET321 GLU322 ASN323 ALA324 GLN325 LYS326 GLY327 GLU328 ILE329 MET330 PRO331 ASN332 ILE333 PRO334 GLN335 MET336 SER337 ALA338 PHE339 TRP340 TYR341 ALA342 VAL343 ARG344 THR345 ALA346 VAL347 ILE348 ASN349 ALA350 ALA351 SER352 GLY353 ARG354 GLN355 THR356 VAL357 ASP358 ALA359 ALA360 LEU361 ALA362 ALA363 ALA364 GLN365 THR366 ASN367 ALA368 ALA369 ALA370 MET1220 SER1221 ALA1222 GLY1223 LEU1224 ASP1225 ILE1226 HIS1227 PHE1228 ARG1229 GLY1230 LYS1231 THR1232 LYS1233 SER1234 PHE1235 PRO1236 GLU1237 ARG1247 ASN1248 MET1249 LYS1250 GLU1251 LYS1252 LEU1253 GLU1254 ASP1255 MET1256 GLU1257 SER1258 VAL1259 LEU1260 LYS1261 ASP1262 LEU1263 THR1264 GLU1265 GLU1266 LYS1267 ARG1268 LYS1269 ASP1270 VAL1271 LEU1272 ASN1273 SER1274 LEU1275 ALA1276 LYS1277 CYS1278 LEU1279 GLY1280 LYS1281 GLU1282 ASP1283 ILE1284 ARG1285 GLN1286 ASP1287 LEU1288 GLU1289 GLN1290 ARG1291 VAL1292 SER1293 GLU1294 VAL1295 LEU1296 ILE1297 SER1298 ARG1299 GLU1300 LEU1301 HIS1302 MET1303 GLU1304 ASP1305 SER1306 ASP1307 LYS1308 PRO1309 LEU1310 LEU1311 SER1312 SER1313 LEU1314 PHE1315 ASN1316 ALA1317 ALA1318 GLY1319 VAL1320 LEU1321 VAL1322 GLU1323 ALA1324 ARG1325 ALA1326 LYS1327 ALA1328 ILE1329 LEU1330 ASP1331 PHE1332 LEU1333 ASP1334 ALA1335 LEU1336 LEU1337 GLU1338 LEU1339 SER1340 GLU1341 GLU1342 GLN1343 GLN1344 PHE1345 VAL1346 ALA1347 GLU1348 ALA1349 LEU1350 GLU1351 LYS1352 GLY1353 THR1354 LEU1355 PRO1356 LEU1357 LEU1358 LYS1359 ASP1360 GLN1361 VAL1362 LYS1363 SER1364 VAL1365 MET1366 GLU1367 ASP1383 PRO1384 GLU1385 ALA1386 ARG1387 ILE1388 LEU1389 CYS1390 ALA1391 LEU1392 TYR1393 VAL1394 VAL1395 VAL1396 SER1397 ILE1398 LEU1399 LEU1400 GLU1401 LEU1402 ALA1403 GLU1404 GLY1405
Ligands
Unit 3 GLC1 GLC2
Unit 4 GLC1 GLC2
Unit 5 ACT1502 NA1503
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany