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Sequence, Chains, Asymmetric and Biological Units

Title RESTRICTION/MODIFICATION SYSTEM-TYPE II R-SWAI COMPLEXED WIT PARTIALLY CLEAVED DNA
Keywords R-SWAI, UNCLEAVED DNA COMPLEX, R/M SYSTEM, RARE CUTTER, DNA PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5TGX     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   R-SWAI PROTEIN  A 225 1854 32
2  Protein   R-SWAI PROTEIN  B 225 1854 32
3  Protein   R-SWAI PROTEIN  C 225 1851 32
4  Protein   R-SWAI PROTEIN  D 225 1854 32
5  Other macromolecule   DNA (26-MER)  H 26 541 0
6  Other macromolecule   DNA (26-MER)  I 26 522 0
7  Other macromolecule   DNA (26-MER)  J 27 560 0
8  Other macromolecule   DNA (26-MER)  K 26 522 0
9  Ligand   R-SWAI PROTEIN  A 5 0 17
10  Ligand   R-SWAI PROTEIN  B 2 0 5
11  Ligand   R-SWAI PROTEIN  C 1 0 1
12  Ligand   R-SWAI PROTEIN  D 2 0 5
13  Ligand   DNA (26-MER)  H 1 0 4
14 Water     212 0 212
total       1228 9558 372
Proteins
Unit 1 ASN2 PHE3 LYS4 LYS5 TYR6 GLU7 GLU8 ASN9 LEU10 VAL11 ALA12 SER13 ILE14 GLU15 GLU16 VAL17 ILE18 GLN19 ARG20 ILE21 ILE22 ASP23 ASP24 LYS25 HIS26 ARG27 PRO28 ASN29 ILE30 ILE31 GLY32 LYS33 THR34 ARG35 VAL36 GLY37 ALA38 GLU39 VAL40 SER41 ASP42 TYR43 LEU44 GLU45 ASP46 GLU47 PHE48 VAL49 LYS50 TYR51 ILE52 SER53 SER54 GLY55 LYS56 SER57 SER58 SER59 LEU60 TYR61 ASP62 ALA63 GLN64 GLY65 ALA66 PRO67 LYS68 GLU69 LYS70 THR71 LYS72 ASN73 PRO74 TRP75 ASP76 ALA77 ARG78 CYS79 LYS80 PHE81 LYS82 PHE83 MSE84 ASP85 ARG86 GLU87 GLU88 GLU89 ILE90 TRP91 ILE92 ASP93 PHE94 LYS95 ALA96 PHE97 LYS98 ILE99 THR100 ASN101 MSE102 ASP103 SER104 ASN105 PRO106 ASP107 ILE108 GLY109 THR110 PRO111 ASN112 LYS113 ILE114 VAL115 LYS116 PHE117 ILE118 HIS119 GLU120 GLY121 ASN122 PHE123 TYR124 LEU125 VAL126 PHE127 VAL128 LEU129 VAL130 TYR131 TYR132 GLU133 SER134 LYS135 GLN136 ASP137 GLY138 VAL139 GLU140 PHE141 VAL142 LYS143 TYR144 ASN145 ASN146 ASP147 TYR148 LYS149 LYS150 VAL151 TYR152 LEU153 LEU154 LYS155 ASP156 VAL157 ASN158 GLU159 SER160 PHE161 ARG162 ILE163 ASN164 PRO165 LYS166 PRO167 GLN168 MSE169 GLN170 VAL171 ASN172 ILE173 ALA174 ALA175 GLU176 PRO177 THR178 TYR179 ARG180 THR181 ARG182 GLU183 GLU184 PHE185 ILE186 HIS187 PHE188 PHE189 VAL190 LYS191 LYS192 TRP193 LYS194 GLU195 SER196 PHE197 GLU198 ARG199 GLN200 ILE201 LYS202 SER203 LEU204 GLU205 LYS206 LYS207 GLU208 ILE209 MSE210 LEU211 LYS212 ASP213 LEU214 GLU215 ASP216 LYS217 LEU218 LYS219 ASN220 SER221 ASN222 ASP223 ASN224 SER225 ILE226
Unit 2 ASN2 PHE3 LYS4 LYS5 TYR6 GLU7 GLU8 ASN9 LEU10 VAL11 ALA12 SER13 ILE14 GLU15 GLU16 VAL17 ILE18 GLN19 ARG20 ILE21 ILE22 ASP23 ASP24 LYS25 HIS26 ARG27 PRO28 ASN29 ILE30 ILE31 GLY32 LYS33 THR34 ARG35 VAL36 GLY37 ALA38 GLU39 VAL40 SER41 ASP42 TYR43 LEU44 GLU45 ASP46 GLU47 PHE48 VAL49 LYS50 TYR51 ILE52 SER53 SER54 GLY55 LYS56 SER57 SER58 SER59 LEU60 TYR61 ASP62 ALA63 GLN64 GLY65 ALA66 PRO67 LYS68 GLU69 LYS70 THR71 LYS72 ASN73 PRO74 TRP75 ASP76 ALA77 ARG78 CYS79 LYS80 PHE81 LYS82 PHE83 MSE84 ASP85 ARG86 GLU87 GLU88 GLU89 ILE90 TRP91 ILE92 ASP93 PHE94 LYS95 ALA96 PHE97 LYS98 ILE99 THR100 ASN101 MSE102 ASP103 SER104 ASN105 PRO106 ASP107 ILE108 GLY109 THR110 PRO111 ASN112 LYS113 ILE114 VAL115 LYS116 PHE117 ILE118 HIS119 GLU120 GLY121 ASN122 PHE123 TYR124 LEU125 VAL126 PHE127 VAL128 LEU129 VAL130 TYR131 TYR132 GLU133 SER134 LYS135 GLN136 ASP137 GLY138 VAL139 GLU140 PHE141 VAL142 LYS143 TYR144 ASN145 ASN146 ASP147 TYR148 LYS149 LYS150 VAL151 TYR152 LEU153 LEU154 LYS155 ASP156 VAL157 ASN158 GLU159 SER160 PHE161 ARG162 ILE163 ASN164 PRO165 LYS166 PRO167 GLN168 MSE169 GLN170 VAL171 ASN172 ILE173 ALA174 ALA175 GLU176 PRO177 THR178 TYR179 ARG180 THR181 ARG182 GLU183 GLU184 PHE185 ILE186 HIS187 PHE188 PHE189 VAL190 LYS191 LYS192 TRP193 LYS194 GLU195 SER196 PHE197 GLU198 ARG199 GLN200 ILE201 LYS202 SER203 LEU204 GLU205 LYS206 LYS207 GLU208 ILE209 MSE210 LEU211 LYS212 ASP213 LEU214 GLU215 ASP216 LYS217 LEU218 LYS219 ASN220 SER221 ASN222 ASP223 ASN224 SER225 ILE226
Unit 3 ASN2 PHE3 LYS4 LYS5 TYR6 GLU7 GLU8 ASN9 LEU10 VAL11 ALA12 SER13 ILE14 GLU15 GLU16 VAL17 ILE18 GLN19 ARG20 ILE21 ILE22 ASP23 ASP24 LYS25 HIS26 ARG27 PRO28 ASN29 ILE30 ILE31 GLY32 LYS33 THR34 ARG35 VAL36 GLY37 ALA38 GLU39 VAL40 SER41 ASP42 TYR43 LEU44 GLU45 ASP46 GLU47 PHE48 VAL49 LYS50 TYR51 ILE52 SER53 SER54 GLY55 LYS56 SER57 SER58 SER59 LEU60 TYR61 ASP62 ALA63 GLN64 GLY65 ALA66 PRO67 LYS68 GLU69 LYS70 THR71 LYS72 ASN73 PRO74 TRP75 ASP76 ALA77 ARG78 CYS79 LYS80 PHE81 LYS82 PHE83 MSE84 ASP85 ARG86 GLU87 GLU88 GLU89 ILE90 TRP91 ILE92 ASP93 PHE94 LYS95 ALA96 PHE97 LYS98 ILE99 THR100 ASN101 MSE102 ASP103 SER104 ASN105 PRO106 ASP107 ILE108 GLY109 THR110 PRO111 ASN112 LYS113 ILE114 VAL115 LYS116 PHE117 ILE118 HIS119 GLU120 GLY121 ASN122 PHE123 TYR124 LEU125 VAL126 PHE127 VAL128 LEU129 VAL130 TYR131 TYR132 GLU133 SER134 LYS135 GLN136 ASP137 GLY138 VAL139 GLU140 PHE141 VAL142 LYS143 TYR144 ASN145 ASN146 ASP147 TYR148 LYS149 LYS150 VAL151 TYR152 LEU153 LEU154 LYS155 ASP156 VAL157 ASN158 GLU159 SER160 PHE161 ARG162 ILE163 ASN164 PRO165 LYS166 PRO167 GLN168 MSE169 GLN170 VAL171 ASN172 ILE173 ALA174 ALA175 GLU176 PRO177 THR178 TYR179 ARG180 THR181 ARG182 GLU183 GLU184 PHE185 ILE186 HIS187 PHE188 PHE189 VAL190 LYS191 LYS192 TRP193 LYS194 GLU195 SER196 PHE197 GLU198 ARG199 GLN200 ILE201 LYS202 SER203 LEU204 GLU205 LYS206 LYS207 GLU208 ILE209 MSE210 LEU211 LYS212 ASP213 LEU214 GLU215 ASP216 LYS217 LEU218 LYS219 ASN220 SER221 ASN222 ASP223 ASN224 SER225 ILE226
Unit 4 ASN2 PHE3 LYS4 LYS5 TYR6 GLU7 GLU8 ASN9 LEU10 VAL11 ALA12 SER13 ILE14 GLU15 GLU16 VAL17 ILE18 GLN19 ARG20 ILE21 ILE22 ASP23 ASP24 LYS25 HIS26 ARG27 PRO28 ASN29 ILE30 ILE31 GLY32 LYS33 THR34 ARG35 VAL36 GLY37 ALA38 GLU39 VAL40 SER41 ASP42 TYR43 LEU44 GLU45 ASP46 GLU47 PHE48 VAL49 LYS50 TYR51 ILE52 SER53 SER54 GLY55 LYS56 SER57 SER58 SER59 LEU60 TYR61 ASP62 ALA63 GLN64 GLY65 ALA66 PRO67 LYS68 GLU69 LYS70 THR71 LYS72 ASN73 PRO74 TRP75 ASP76 ALA77 ARG78 CYS79 LYS80 PHE81 LYS82 PHE83 MSE84 ASP85 ARG86 GLU87 GLU88 GLU89 ILE90 TRP91 ILE92 ASP93 PHE94 LYS95 ALA96 PHE97 LYS98 ILE99 THR100 ASN101 MSE102 ASP103 SER104 ASN105 PRO106 ASP107 ILE108 GLY109 THR110 PRO111 ASN112 LYS113 ILE114 VAL115 LYS116 PHE117 ILE118 HIS119 GLU120 GLY121 ASN122 PHE123 TYR124 LEU125 VAL126 PHE127 VAL128 LEU129 VAL130 TYR131 TYR132 GLU133 SER134 LYS135 GLN136 ASP137 GLY138 VAL139 GLU140 PHE141 VAL142 LYS143 TYR144 ASN145 ASN146 ASP147 TYR148 LYS149 LYS150 VAL151 TYR152 LEU153 LEU154 LYS155 ASP156 VAL157 ASN158 GLU159 SER160 PHE161 ARG162 ILE163 ASN164 PRO165 LYS166 PRO167 GLN168 MSE169 GLN170 VAL171 ASN172 ILE173 ALA174 ALA175 GLU176 PRO177 THR178 TYR179 ARG180 THR181 ARG182 GLU183 GLU184 PHE185 ILE186 HIS187 PHE188 PHE189 VAL190 LYS191 LYS192 TRP193 LYS194 GLU195 SER196 PHE197 GLU198 ARG199 GLN200 ILE201 LYS202 SER203 LEU204 GLU205 LYS206 LYS207 GLU208 ILE209 MSE210 LEU211 LYS212 ASP213 LEU214 GLU215 ASP216 LYS217 LEU218 LYS219 ASN220 SER221 ASN222 ASP223 ASN224 SER225 ILE226
Other macromolecules
Unit 5 DG2 DG3 DC4 DG5 DG6 DA7 DG8 DG9 DC10 DA11 DT12 DT13 DT14 DA25 DA26 DA27 DT28 DG29 DC30 DC31 DG32 DC33 DG34 DC35 DG36 DG37
Unit 6 DC2 DC3 DG4 DC5 DG6 DC7 DG8 DG9 DC10 DA11 DT12 DT13 DT14 DA25 DA26 DA27 DT28 DG29 DC30 DC31 DT32 DC33 DC34 DG35 DC36 DC37
Unit 7 DG1 DG2 DG3 DC4 DG5 DG6 DA7 DG8 DG9 DC10 DA11 DT12 DT13 DT14 DA25 DA26 DA27 DT28 DG29 DC30 DC31 DG32 DC33 DG34 DC35 DG36 DG37
Unit 8 DC2 DC3 DG4 DC5 DG6 DC7 DG8 DG9 DC10 DA11 DT12 DT13 DT14 DA25 DA26 DA27 DT28 DG29 DC30 DC31 DT32 DC33 DC34 DG35 DC36 DC37
Ligands
Unit 9 CA301 EDO302 EDO303 EDO304 EDO305
Unit 10 CA301 ACT302
Unit 11 CA301
Unit 12 CA301 EDO302
Unit 13 EDO101
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany