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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN APOBEC3B VARIANT COMPLEXED WITH S
Keywords DEAMINASE, DNA SUBSTRATE COMPLEX, HYDROLASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5TD5     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA DC->DU-EDITING ENZYME APOBEC-3B  A 179 2864 0
2  Other macromolecule   DNA (5'-D(P*TP*TP*CP*AP*T)-3')  C 5 130 0
3  Ligand   DNA DC->DU-EDITING ENZYME APOBEC-3B  A 17 0 71
4  Ligand   DNA (5'-D(P*TP*TP*CP*AP*T)-3')  C 1 0 1
5 Water     98 0 98
total       300 2994 170
Proteins
Unit 1 ARG190 TYR191 LEU192 MET193 ASP194 PRO195 ASP196 THR197 PHE198 THR199 SER200 ASN201 PHE202 ASN203 ASN204 GLY205 ILE209 GLY210 ARG211 HIS212 LYS213 THR214 TYR215 LEU216 CYS217 TYR218 GLU219 VAL220 GLU221 ARG222 LEU223 ASP224 ASN225 GLY226 THR227 SER228 VAL229 LYS230 MET231 ASP232 GLN233 HIS234 MET235 GLY236 PHE237 LEU238 CYS239 ASN240 GLU241 SER250 GLY251 ARG252 HIS253 ALA254 ALA255 LEU256 ARG257 PHE258 LEU259 ASP260 LEU261 VAL262 PRO263 SER264 LEU265 GLN266 LEU267 ASP268 PRO269 ALA270 GLN271 ILE272 TYR273 ARG274 VAL275 THR276 TRP277 PHE278 ILE279 SER280 TRP281 SER282 PRO283 CYS284 PHE285 SER286 TRP287 GLY288 CYS289 ALA290 GLY291 GLU292 VAL293 ARG294 ALA295 PHE296 LEU297 GLN298 GLU299 ASN300 THR301 HIS302 VAL303 ARG304 LEU305 ARG306 ILE307 LYS308 ALA309 ALA310 ARG311 ILE312 TYR313 ASP314 TYR315 ASP316 PRO317 LEU318 TYR319 LYS320 GLU321 ALA322 LEU323 GLN324 MET325 LEU326 ARG327 ASP328 ALA329 GLY330 ALA331 GLN332 VAL333 SER334 ILE335 MET336 THR337 TYR338 ASP339 GLU340 PHE341 GLU342 TYR343 CYS344 TRP345 ASP346 THR347 PHE348 VAL349 TYR350 ARG351 GLN352 GLY353 CYS354 PRO355 PHE356 GLN357 PRO358 TRP359 ASP360 GLY361 LEU362 GLU363 GLU364 HIS365 SER366 GLN367 ALA368 LEU369 SER370 GLY371 ARG372 LEU373 ARG374 ALA375 ILE376 LEU377 GLN378 LEU379
Other macromolecules
Unit 2 DT-2 DT-1 DC0 DA1 DT2
Ligands
Unit 3 ZN401 IOD402 IOD403 IOD404 IOD405 IOD406 IOD407 IOD408 IOD409 EDO410 EDO411 EDO412 EDO413 EDO414 EDO415 CL416 CL417
Unit 4 IOD101
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany