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Sequence, Chains, Asymmetric and Biological Units

Title COMPLEMENT FACTOR D INHIBITED WITH JH4
Keywords SERINE PROTEASE, INHIBITOR, HYDROLASE-HYDROLASE INHIBITOR CO
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5TCC     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   COMPLEMENT FACTOR D  A 228 1700 0
2  Protein   COMPLEMENT FACTOR D  B 228 1698 0
3  Protein   COMPLEMENT FACTOR D  C 228 1702 0
4  Protein   COMPLEMENT FACTOR D  D 228 1703 0
5  Protein   COMPLEMENT FACTOR D  E 228 1677 0
6  Protein   COMPLEMENT FACTOR D  F 228 1709 0
7  Protein   COMPLEMENT FACTOR D  G 226 1698 0
8  Ligand   COMPLEMENT FACTOR D  A 1 0 27
9  Ligand   COMPLEMENT FACTOR D  B 1 0 27
10  Ligand   COMPLEMENT FACTOR D  C 2 0 54
11  Ligand   COMPLEMENT FACTOR D  D 1 0 27
12  Ligand   COMPLEMENT FACTOR D  E 2 0 54
13  Ligand   COMPLEMENT FACTOR D  F 1 0 27
14  Ligand   COMPLEMENT FACTOR D  G 1 0 27
total       1603 11887 243

Proteins
Unit 1 ILE16 LEU17 GLY18 GLY19 ARG20 GLU21 ALA22 GLU23 ALA24 HIS25 ALA26 ARG27 PRO28 TYR29 MET30 ALA31 SER32 VAL33 GLN34 LEU35 ASN36 GLY37 ALA38 HIS39 LEU40 CYS41 GLY42 GLY43 VAL44 LEU45 VAL46 ALA47 GLU48 GLN49 TRP50 VAL51 LEU52 SER53 ALA54 ALA55 HIS56 CYS57 LEU58 GLU59 ASP60 ALA61 ALA62 ASP63 GLY64 LYS65 VAL66 GLN67 VAL68 LEU69 LEU70 GLY71 ALA72 HIS73 SER74 LEU75 SER76 GLN77 PRO78 GLU79 PRO80 SER81 LYS82 ARG83 LEU84 TYR85 ASP86 VAL87 LEU88 ARG89 ALA90 VAL91 PRO92 HIS93 PRO94 ASP95 SER96 GLN97 PRO98 ASP99 THR100 ILE101 ASP102 HIS103 ASP104 LEU105 LEU106 LEU107 LEU108 GLN109 LEU110 SER111 GLU112 LYS113 ALA114 THR115 LEU116 GLY117 PRO118 ALA119 VAL120 ARG121 PRO122 LEU123 PRO124 TRP125 GLN126 ARG127 VAL128 ASP129 ARG130 ASP131 VAL132 ALA133 PRO134 GLY135 THR136 LEU137 CYS138 ASP139 VAL140 ALA141 GLY142 TRP143 GLY144 ILE145 VAL146 ASN147 HIS148 ALA149 GLY150 ARG151 ARG152 PRO153 ASP154 SER155 LEU156 GLN157 HIS158 VAL159 LEU160 LEU161 PRO162 VAL163 LEU164 ASP165 ARG166 ALA167 THR168 CYS169 ASN170 ARG171 ARG172 THR173 HIS174 HIS175 ASP176 GLY177 ALA178 ILE179 THR180 GLU181 ARG182 LEU183 MET184 CYS185 ALA186 GLU187 SER188 ASN189 ARG190 ARG191 ASP192 SER193 CYS194 LYS195 GLY196 ASP197 SER198 GLY199 GLY200 PRO201 LEU202 VAL203 CYS204 GLY205 GLY206 VAL207 LEU208 GLU209 GLY210 VAL211 VAL212 THR213 SER214 GLY215 SER216 ARG217 VAL218 CYS219 GLY220 ASN221 ARG222 LYS223 LYS224 PRO225 GLY226 ILE227 TYR228 THR229 ARG230 VAL231 ALA232 SER233 TYR234 ALA235 ALA236 TRP237 ILE238 ASP239 SER240 VAL241 LEU242 ALA243
Unit 2 ILE16 LEU17 GLY18 GLY19 ARG20 GLU21 ALA22 GLU23 ALA24 HIS25 ALA26 ARG27 PRO28 TYR29 MET30 ALA31 SER32 VAL33 GLN34 LEU35 ASN36 GLY37 ALA38 HIS39 LEU40 CYS41 GLY42 GLY43 VAL44 LEU45 VAL46 ALA47 GLU48 GLN49 TRP50 VAL51 LEU52 SER53 ALA54 ALA55 HIS56 CYS57 LEU58 GLU59 ASP60 ALA61 ALA62 ASP63 GLY64 LYS65 VAL66 GLN67 VAL68 LEU69 LEU70 GLY71 ALA72 HIS73 SER74 LEU75 SER76 GLN77 PRO78 GLU79 PRO80 SER81 LYS82 ARG83 LEU84 TYR85 ASP86 VAL87 LEU88 ARG89 ALA90 VAL91 PRO92 HIS93 PRO94 ASP95 SER96 GLN97 PRO98 ASP99 THR100 ILE101 ASP102 HIS103 ASP104 LEU105 LEU106 LEU107 LEU108 GLN109 LEU110 SER111 GLU112 LYS113 ALA114 THR115 LEU116 GLY117 PRO118 ALA119 VAL120 ARG121 PRO122 LEU123 PRO124 TRP125 GLN126 ARG127 VAL128 ASP129 ARG130 ASP131 VAL132 ALA133 PRO134 GLY135 THR136 LEU137 CYS138 ASP139 VAL140 ALA141 GLY142 TRP143 GLY144 ILE145 VAL146 ASN147 HIS148 ALA149 GLY150 ARG151 ARG152 PRO153 ASP154 SER155 LEU156 GLN157 HIS158 VAL159 LEU160 LEU161 PRO162 VAL163 LEU164 ASP165 ARG166 ALA167 THR168 CYS169 ASN170 ARG171 ARG172 THR173 HIS174 HIS175 ASP176 GLY177 ALA178 ILE179 THR180 GLU181 ARG182 LEU183 MET184 CYS185 ALA186 GLU187 SER188 ASN189 ARG190 ARG191 ASP192 SER193 CYS194 LYS195 GLY196 ASP197 SER198 GLY199 GLY200 PRO201 LEU202 VAL203 CYS204 GLY205 GLY206 VAL207 LEU208 GLU209 GLY210 VAL211 VAL212 THR213 SER214 GLY215 SER216 ARG217 VAL218 CYS219 GLY220 ASN221 ARG222 LYS223 LYS224 PRO225 GLY226 ILE227 TYR228 THR229 ARG230 VAL231 ALA232 SER233 TYR234 ALA235 ALA236 TRP237 ILE238 ASP239 SER240 VAL241 LEU242 ALA243
Unit 3 ILE16 LEU17 GLY18 GLY19 ARG20 GLU21 ALA22 GLU23 ALA24 HIS25 ALA26 ARG27 PRO28 TYR29 MET30 ALA31 SER32 VAL33 GLN34 LEU35 ASN36 GLY37 ALA38 HIS39 LEU40 CYS41 GLY42 GLY43 VAL44 LEU45 VAL46 ALA47 GLU48 GLN49 TRP50 VAL51 LEU52 SER53 ALA54 ALA55 HIS56 CYS57 LEU58 GLU59 ASP60 ALA61 ALA62 ASP63 GLY64 LYS65 VAL66 GLN67 VAL68 LEU69 LEU70 GLY71 ALA72 HIS73 SER74 LEU75 SER76 GLN77 PRO78 GLU79 PRO80 SER81 LYS82 ARG83 LEU84 TYR85 ASP86 VAL87 LEU88 ARG89 ALA90 VAL91 PRO92 HIS93 PRO94 ASP95 SER96 GLN97 PRO98 ASP99 THR100 ILE101 ASP102 HIS103 ASP104 LEU105 LEU106 LEU107 LEU108 GLN109 LEU110 SER111 GLU112 LYS113 ALA114 THR115 LEU116 GLY117 PRO118 ALA119 VAL120 ARG121 PRO122 LEU123 PRO124 TRP125 GLN126 ARG127 VAL128 ASP129 ARG130 ASP131 VAL132 ALA133 PRO134 GLY135 THR136 LEU137 CYS138 ASP139 VAL140 ALA141 GLY142 TRP143 GLY144 ILE145 VAL146 ASN147 HIS148 ALA149 GLY150 ARG151 ARG152 PRO153 ASP154 SER155 LEU156 GLN157 HIS158 VAL159 LEU160 LEU161 PRO162 VAL163 LEU164 ASP165 ARG166 ALA167 THR168 CYS169 ASN170 ARG171 ARG172 THR173 HIS174 HIS175 ASP176 GLY177 ALA178 ILE179 THR180 GLU181 ARG182 LEU183 MET184 CYS185 ALA186 GLU187 SER188 ASN189 ARG190 ARG191 ASP192 SER193 CYS194 LYS195 GLY196 ASP197 SER198 GLY199 GLY200 PRO201 LEU202 VAL203 CYS204 GLY205 GLY206 VAL207 LEU208 GLU209 GLY210 VAL211 VAL212 THR213 SER214 GLY215 SER216 ARG217 VAL218 CYS219 GLY220 ASN221 ARG222 LYS223 LYS224 PRO225 GLY226 ILE227 TYR228 THR229 ARG230 VAL231 ALA232 SER233 TYR234 ALA235 ALA236 TRP237 ILE238 ASP239 SER240 VAL241 LEU242 ALA243
Unit 4 ILE16 LEU17 GLY18 GLY19 ARG20 GLU21 ALA22 GLU23 ALA24 HIS25 ALA26 ARG27 PRO28 TYR29 MET30 ALA31 SER32 VAL33 GLN34 LEU35 ASN36 GLY37 ALA38 HIS39 LEU40 CYS41 GLY42 GLY43 VAL44 LEU45 VAL46 ALA47 GLU48 GLN49 TRP50 VAL51 LEU52 SER53 ALA54 ALA55 HIS56 CYS57 LEU58 GLU59 ASP60 ALA61 ALA62 ASP63 GLY64 LYS65 VAL66 GLN67 VAL68 LEU69 LEU70 GLY71 ALA72 HIS73 SER74 LEU75 SER76 GLN77 PRO78 GLU79 PRO80 SER81 LYS82 ARG83 LEU84 TYR85 ASP86 VAL87 LEU88 ARG89 ALA90 VAL91 PRO92 HIS93 PRO94 ASP95 SER96 GLN97 PRO98 ASP99 THR100 ILE101 ASP102 HIS103 ASP104 LEU105 LEU106 LEU107 LEU108 GLN109 LEU110 SER111 GLU112 LYS113 ALA114 THR115 LEU116 GLY117 PRO118 ALA119 VAL120 ARG121 PRO122 LEU123 PRO124 TRP125 GLN126 ARG127 VAL128 ASP129 ARG130 ASP131 VAL132 ALA133 PRO134 GLY135 THR136 LEU137 CYS138 ASP139 VAL140 ALA141 GLY142 TRP143 GLY144 ILE145 VAL146 ASN147 HIS148 ALA149 GLY150 ARG151 ARG152 PRO153 ASP154 SER155 LEU156 GLN157 HIS158 VAL159 LEU160 LEU161 PRO162 VAL163 LEU164 ASP165 ARG166 ALA167 THR168 CYS169 ASN170 ARG171 ARG172 THR173 HIS174 HIS175 ASP176 GLY177 ALA178 ILE179 THR180 GLU181 ARG182 LEU183 MET184 CYS185 ALA186 GLU187 SER188 ASN189 ARG190 ARG191 ASP192 SER193 CYS194 LYS195 GLY196 ASP197 SER198 GLY199 GLY200 PRO201 LEU202 VAL203 CYS204 GLY205 GLY206 VAL207 LEU208 GLU209 GLY210 VAL211 VAL212 THR213 SER214 GLY215 SER216 ARG217 VAL218 CYS219 GLY220 ASN221 ARG222 LYS223 LYS224 PRO225 GLY226 ILE227 TYR228 THR229 ARG230 VAL231 ALA232 SER233 TYR234 ALA235 ALA236 TRP237 ILE238 ASP239 SER240 VAL241 LEU242 ALA243
Unit 5 ILE16 LEU17 GLY18 GLY19 ARG20 GLU21 ALA22 GLU23 ALA24 HIS25 ALA26 ARG27 PRO28 TYR29 MET30 ALA31 SER32 VAL33 GLN34 LEU35 ASN36 GLY37 ALA38 HIS39 LEU40 CYS41 GLY42 GLY43 VAL44 LEU45 VAL46 ALA47 GLU48 GLN49 TRP50 VAL51 LEU52 SER53 ALA54 ALA55 HIS56 CYS57 LEU58 GLU59 ASP60 ALA61 ALA62 ASP63 GLY64 LYS65 VAL66 GLN67 VAL68 LEU69 LEU70 GLY71 ALA72 HIS73 SER74 LEU75 SER76 GLN77 PRO78 GLU79 PRO80 SER81 LYS82 ARG83 LEU84 TYR85 ASP86 VAL87 LEU88 ARG89 ALA90 VAL91 PRO92 HIS93 PRO94 ASP95 SER96 GLN97 PRO98 ASP99 THR100 ILE101 ASP102 HIS103 ASP104 LEU105 LEU106 LEU107 LEU108 GLN109 LEU110 SER111 GLU112 LYS113 ALA114 THR115 LEU116 GLY117 PRO118 ALA119 VAL120 ARG121 PRO122 LEU123 PRO124 TRP125 GLN126 ARG127 VAL128 ASP129 ARG130 ASP131 VAL132 ALA133 PRO134 GLY135 THR136 LEU137 CYS138 ASP139 VAL140 ALA141 GLY142 TRP143 GLY144 ILE145 VAL146 ASN147 HIS148 ALA149 GLY150 ARG151 ARG152 PRO153 ASP154 SER155 LEU156 GLN157 HIS158 VAL159 LEU160 LEU161 PRO162 VAL163 LEU164 ASP165 ARG166 ALA167 THR168 CYS169 ASN170 ARG171 ARG172 THR173 HIS174 HIS175 ASP176 GLY177 ALA178 ILE179 THR180 GLU181 ARG182 LEU183 MET184 CYS185 ALA186 GLU187 SER188 ASN189 ARG190 ARG191 ASP192 SER193 CYS194 LYS195 GLY196 ASP197 SER198 GLY199 GLY200 PRO201 LEU202 VAL203 CYS204 GLY205 GLY206 VAL207 LEU208 GLU209 GLY210 VAL211 VAL212 THR213 SER214 GLY215 SER216 ARG217 VAL218 CYS219 GLY220 ASN221 ARG222 LYS223 LYS224 PRO225 GLY226 ILE227 TYR228 THR229 ARG230 VAL231 ALA232 SER233 TYR234 ALA235 ALA236 TRP237 ILE238 ASP239 SER240 VAL241 LEU242 ALA243
Unit 6 ILE16 LEU17 GLY18 GLY19 ARG20 GLU21 ALA22 GLU23 ALA24 HIS25 ALA26 ARG27 PRO28 TYR29 MET30 ALA31 SER32 VAL33 GLN34 LEU35 ASN36 GLY37 ALA38 HIS39 LEU40 CYS41 GLY42 GLY43 VAL44 LEU45 VAL46 ALA47 GLU48 GLN49 TRP50 VAL51 LEU52 SER53 ALA54 ALA55 HIS56 CYS57 LEU58 GLU59 ASP60 ALA61 ALA62 ASP63 GLY64 LYS65 VAL66 GLN67 VAL68 LEU69 LEU70 GLY71 ALA72 HIS73 SER74 LEU75 SER76 GLN77 PRO78 GLU79 PRO80 SER81 LYS82 ARG83 LEU84 TYR85 ASP86 VAL87 LEU88 ARG89 ALA90 VAL91 PRO92 HIS93 PRO94 ASP95 SER96 GLN97 PRO98 ASP99 THR100 ILE101 ASP102 HIS103 ASP104 LEU105 LEU106 LEU107 LEU108 GLN109 LEU110 SER111 GLU112 LYS113 ALA114 THR115 LEU116 GLY117 PRO118 ALA119 VAL120 ARG121 PRO122 LEU123 PRO124 TRP125 GLN126 ARG127 VAL128 ASP129 ARG130 ASP131 VAL132 ALA133 PRO134 GLY135 THR136 LEU137 CYS138 ASP139 VAL140 ALA141 GLY142 TRP143 GLY144 ILE145 VAL146 ASN147 HIS148 ALA149 GLY150 ARG151 ARG152 PRO153 ASP154 SER155 LEU156 GLN157 HIS158 VAL159 LEU160 LEU161 PRO162 VAL163 LEU164 ASP165 ARG166 ALA167 THR168 CYS169 ASN170 ARG171 ARG172 THR173 HIS174 HIS175 ASP176 GLY177 ALA178 ILE179 THR180 GLU181 ARG182 LEU183 MET184 CYS185 ALA186 GLU187 SER188 ASN189 ARG190 ARG191 ASP192 SER193 CYS194 LYS195 GLY196 ASP197 SER198 GLY199 GLY200 PRO201 LEU202 VAL203 CYS204 GLY205 GLY206 VAL207 LEU208 GLU209 GLY210 VAL211 VAL212 THR213 SER214 GLY215 SER216 ARG217 VAL218 CYS219 GLY220 ASN221 ARG222 LYS223 LYS224 PRO225 GLY226 ILE227 TYR228 THR229 ARG230 VAL231 ALA232 SER233 TYR234 ALA235 ALA236 TRP237 ILE238 ASP239 SER240 VAL241 LEU242 ALA243
Unit 7 ILE16 LEU17 GLY18 GLY19 ARG20 GLU21 ALA22 GLU23 ALA24 HIS25 ALA26 ARG27 PRO28 TYR29 MET30 ALA31 SER32 VAL33 GLN34 LEU35 ASN36 GLY37 ALA38 HIS39 LEU40 CYS41 GLY42 GLY43 VAL44 LEU45 VAL46 ALA47 GLU48 GLN49 TRP50 VAL51 LEU52 SER53 ALA54 ALA55 HIS56 CYS57 LEU58 GLU59 ASP60 ASP63 GLY64 LYS65 VAL66 GLN67 VAL68 LEU69 LEU70 GLY71 ALA72 HIS73 SER74 LEU75 SER76 GLN77 PRO78 GLU79 PRO80 SER81 LYS82 ARG83 LEU84 TYR85 ASP86 VAL87 LEU88 ARG89 ALA90 VAL91 PRO92 HIS93 PRO94 ASP95 SER96 GLN97 PRO98 ASP99 THR100 ILE101 ASP102 HIS103 ASP104 LEU105 LEU106 LEU107 LEU108 GLN109 LEU110 SER111 GLU112 LYS113 ALA114 THR115 LEU116 GLY117 PRO118 ALA119 VAL120 ARG121 PRO122 LEU123 PRO124 TRP125 GLN126 ARG127 VAL128 ASP129 ARG130 ASP131 VAL132 ALA133 PRO134 GLY135 THR136 LEU137 CYS138 ASP139 VAL140 ALA141 GLY142 TRP143 GLY144 ILE145 VAL146 ASN147 HIS148 ALA149 GLY150 ARG151 ARG152 PRO153 ASP154 SER155 LEU156 GLN157 HIS158 VAL159 LEU160 LEU161 PRO162 VAL163 LEU164 ASP165 ARG166 ALA167 THR168 CYS169 ASN170 ARG171 ARG172 THR173 HIS174 HIS175 ASP176 GLY177 ALA178 ILE179 THR180 GLU181 ARG182 LEU183 MET184 CYS185 ALA186 GLU187 SER188 ASN189 ARG190 ARG191 ASP192 SER193 CYS194 LYS195 GLY196 ASP197 SER198 GLY199 GLY200 PRO201 LEU202 VAL203 CYS204 GLY205 GLY206 VAL207 LEU208 GLU209 GLY210 VAL211 VAL212 THR213 SER214 GLY215 SER216 ARG217 VAL218 CYS219 GLY220 ASN221 ARG222 LYS223 LYS224 PRO225 GLY226 ILE227 TYR228 THR229 ARG230 VAL231 ALA232 SER233 TYR234 ALA235 ALA236 TRP237 ILE238 ASP239 SER240 VAL241 LEU242 ALA243

Ligands
Unit 8 J56500
Unit 9 J56500
Unit 10 J56301 J56302
Unit 11 J56500
Unit 12 J56301 J56302
Unit 13 J56500
Unit 14 J56500

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany