[Image Library Home] | [Image Library Entry] |
Title | A NOVEL DOMAIN IN HUMAN EXOG CONVERTS APOPTOTIC ENDONUCLEASE REPAIR ENZYME | |
Keywords | MITOCHONDRIA, EXONUCLEASE, DNA-REPAIR, COMPLEX, HYDROLASE-DN | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 5T4I | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | NUCLEASE EXOG, MITOCHONDRIAL | A | 297 | 4721 | 0 |
2 | Protein | NUCLEASE EXOG, MITOCHONDRIAL | B | 298 | 4743 | 0 |
3 | Other macromolecule | DNA (5'-D(P*CP*TP*GP*AP*CP*GP*TP*GP*C)-3') | C | 9 | 287 | 0 |
4 | Other macromolecule | DNA (5'-D(*GP*CP*AP*CP*GP*TP*CP*AP*G)-3') | D | 9 | 284 | 0 |
5 | Other macromolecule | DNA (5'-D(P*CP*TP*GP*AP*CP*GP*TP*GP*C)-3') | E | 9 | 287 | 0 |
6 | Other macromolecule | DNA (5'-D(*GP*CP*AP*CP*GP*TP*CP*AP*G)-3') | F | 9 | 284 | 0 |
7 | Ligand | NUCLEASE EXOG, MITOCHONDRIAL | A | 1 | 0 | 1 |
8 | Ligand | NUCLEASE EXOG, MITOCHONDRIAL | B | 1 | 0 | 1 |
9 | Water | 53 | 0 | 53 | ||
total | 686 | 10606 | 55 |
Unit 1 | ALA60 VAL61 LEU62 GLU63 GLN64 PHE65 GLY66 PHE67 PRO68 LEU69 THR70 GLY71 THR72 GLU73 ALA74 ARG75 CYS76 TYR77 THR78 ASN79 HIS80 ALA81 LEU82 SER83 TYR84 ASP85 GLN86 ALA87 LYS88 ARG89 VAL90 PRO91 ARG92 TRP93 VAL94 LEU95 GLU96 HIS97 ILE98 SER99 LYS100 SER101 LYS102 ILE103 MET104 GLY105 ASP106 ALA107 ASP108 ARG109 LYS110 HIS111 CYS112 LYS113 PHE114 LYS115 PRO116 ASP117 PRO118 ASN119 ILE120 PRO121 PRO122 THR123 PHE124 SER125 ALA126 PHE127 ASN128 GLU129 ASP130 TYR131 VAL132 GLY133 SER134 GLY135 TRP136 SER137 ARG138 GLY139 ALA140 MET141 ALA142 PRO143 ALA144 GLY145 ASN146 ASN147 LYS148 PHE149 SER150 SER151 LYS152 ALA153 MET154 ALA155 GLU156 THR157 PHE158 TYR159 LEU160 SER161 ASN162 ILE163 VAL164 PRO165 GLN166 ASP167 PHE168 ASP169 ASN170 ASN171 SER172 GLY173 TYR174 TRP175 ASN176 ARG177 ILE178 GLU179 MET180 TYR181 CYS182 ARG183 GLU184 LEU185 THR186 GLU187 ARG188 PHE189 GLU190 ASP191 VAL192 TRP193 VAL194 VAL195 SER196 GLY197 PRO198 LEU199 THR200 LEU201 PRO202 GLN203 THR204 ARG205 GLY206 ASP207 GLY208 LYS209 LYS210 ILE211 VAL212 SER213 TYR214 GLN215 VAL216 ILE217 GLY218 GLU219 ASP220 ASN221 VAL222 ALA223 VAL224 PRO225 SER226 HIS227 LEU228 TYR229 LYS230 VAL231 ILE232 LEU233 ALA234 ARG235 ARG236 SER237 SER238 VAL239 SER240 THR241 GLU242 PRO243 LEU244 ALA245 LEU246 GLY247 ALA248 PHE249 VAL250 VAL251 PRO252 ASN253 GLU254 ALA255 ILE256 GLY257 PHE258 GLN259 PRO260 GLN261 LEU262 THR263 GLU264 PHE265 GLN266 VAL267 SER268 LEU269 GLN270 ASP271 LEU272 GLU273 LYS274 LEU275 SER276 GLY277 LEU278 VAL279 PHE280 PHE281 PRO282 HIS283 LEU284 ASP285 ARG286 THR287 SER288 ASP289 ILE290 ARG291 ASN292 ILE293 CYS294 SER295 VAL296 ASP297 THR298 CYS299 LYS300 LEU301 LEU302 ASP303 PHE304 GLN305 GLU306 PHE307 THR308 LEU309 TYR310 LEU311 SER312 THR313 ARG314 LYS315 ILE316 GLU317 GLY318 ALA319 ARG320 SER321 VAL322 LEU323 ARG324 LEU325 GLU326 LYS327 ILE328 MET329 GLU330 ASN331 LEU332 LYS333 ASN334 ALA335 GLU336 ILE337 GLU338 PRO339 ASP340 ASP341 TYR342 PHE343 MET344 SER345 ARG346 TYR347 GLU348 LYS349 LYS350 LEU351 GLU352 GLU353 LEU354 LYS355 ALA356 |
Unit 2 | ALA60 VAL61 LEU62 GLU63 GLN64 PHE65 GLY66 PHE67 PRO68 LEU69 THR70 GLY71 THR72 GLU73 ALA74 ARG75 CYS76 TYR77 THR78 ASN79 HIS80 ALA81 LEU82 SER83 TYR84 ASP85 GLN86 ALA87 LYS88 ARG89 VAL90 PRO91 ARG92 TRP93 VAL94 LEU95 GLU96 HIS97 ILE98 SER99 LYS100 SER101 LYS102 ILE103 MET104 GLY105 ASP106 ALA107 ASP108 ARG109 LYS110 HIS111 CYS112 LYS113 PHE114 LYS115 PRO116 ASP117 PRO118 ASN119 ILE120 PRO121 PRO122 THR123 PHE124 SER125 ALA126 PHE127 ASN128 GLU129 ASP130 TYR131 VAL132 GLY133 SER134 GLY135 TRP136 SER137 ARG138 GLY139 ALA140 MET141 ALA142 PRO143 ALA144 GLY145 ASN146 ASN147 LYS148 PHE149 SER150 SER151 LYS152 ALA153 MET154 ALA155 GLU156 THR157 PHE158 TYR159 LEU160 SER161 ASN162 ILE163 VAL164 PRO165 GLN166 ASP167 PHE168 ASP169 ASN170 ASN171 SER172 GLY173 TYR174 TRP175 ASN176 ARG177 ILE178 GLU179 MET180 TYR181 CYS182 ARG183 GLU184 LEU185 THR186 GLU187 ARG188 PHE189 GLU190 ASP191 VAL192 TRP193 VAL194 VAL195 SER196 GLY197 PRO198 LEU199 THR200 LEU201 PRO202 GLN203 THR204 ARG205 GLY206 ASP207 GLY208 LYS209 LYS210 ILE211 VAL212 SER213 TYR214 GLN215 VAL216 ILE217 GLY218 GLU219 ASP220 ASN221 VAL222 ALA223 VAL224 PRO225 SER226 HIS227 LEU228 TYR229 LYS230 VAL231 ILE232 LEU233 ALA234 ARG235 ARG236 SER237 SER238 VAL239 SER240 THR241 GLU242 PRO243 LEU244 ALA245 LEU246 GLY247 ALA248 PHE249 VAL250 VAL251 PRO252 ASN253 GLU254 ALA255 ILE256 GLY257 PHE258 GLN259 PRO260 GLN261 LEU262 THR263 GLU264 PHE265 GLN266 VAL267 SER268 LEU269 GLN270 ASP271 LEU272 GLU273 LYS274 LEU275 SER276 GLY277 LEU278 VAL279 PHE280 PHE281 PRO282 HIS283 LEU284 ASP285 ARG286 THR287 SER288 ASP289 ILE290 ARG291 ASN292 ILE293 CYS294 SER295 VAL296 ASP297 THR298 CYS299 LYS300 LEU301 LEU302 ASP303 PHE304 GLN305 GLU306 PHE307 THR308 LEU309 TYR310 LEU311 SER312 THR313 ARG314 LYS315 ILE316 GLU317 GLY318 ALA319 ARG320 SER321 VAL322 LEU323 ARG324 LEU325 GLU326 LYS327 ILE328 MET329 GLU330 ASN331 LEU332 LYS333 ASN334 ALA335 GLU336 ILE337 GLU338 PRO339 ASP340 ASP341 TYR342 PHE343 MET344 SER345 ARG346 TYR347 GLU348 LYS349 LYS350 LEU351 GLU352 GLU353 LEU354 LYS355 ALA356 LYS357 |
Unit 3 | DC1 DT2 DG3 DA4 DC5 DG6 DT7 DG8 DC9 |
Unit 4 | DG2 DC3 DA4 DC5 DG6 DT7 DC8 DA9 DG10 |
Unit 5 | DC1 DT2 DG3 DA4 DC5 DG6 DT7 DG8 DC9 |
Unit 6 | DG2 DC3 DA4 DC5 DG6 DT7 DC8 DA9 DG10 |
Unit 7 | MN401 |
Unit 8 | MN401 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |