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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HEPARAN SULFATE 6-O-SULFOTRANSFERASE WI PAP AND HEPTASACCHARIDE SUBSTRATE
Keywords HEPARAN SULFATE, SULFOTRANSFERASE, COMPLEX, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5T0A     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALTOSE BINDING PROTEIN - HEPARAN SULFATE 6-O- SULFOTRANSFERASE ISOFORM 3 FUSION PROTEIN  A 670 5206 0
2  Protein   MALTOSE BINDING PROTEIN - HEPARAN SULFATE 6-O- SULFOTRANSFERASE ISOFORM 3 FUSION PROTEIN  B 677 5251 0
3  Ligand    C 6 0 85
4  Ligand    D 4 0 45
5  Ligand    E 7 0 97
6  Ligand    F 4 0 45
7  Ligand   MALTOSE BINDING PROTEIN - HEPARAN SULFATE 6-O- SULFOTRANSFERASE ISOFORM 3 FUSION PROTEIN  A 21 0 107
8  Ligand   MALTOSE BINDING PROTEIN - HEPARAN SULFATE 6-O- SULFOTRANSFERASE ISOFORM 3 FUSION PROTEIN  B 10 0 63
9 Water     1011 0 1011
total       2410 10457 1453
Proteins
Unit 1 ILE2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ALA82 ALA83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA172 ALA173 GLY174 LYS175 TYR176 ASP177 ILE178 LYS179 ASP180 VAL181 GLY182 VAL183 ASP184 ASN185 ALA186 GLY187 ALA188 LYS189 ALA190 GLY191 LEU192 THR193 PHE194 LEU195 VAL196 ASP197 LEU198 ILE199 LYS200 ASN201 LYS202 HIS203 MET204 ASN205 ALA206 ASP207 THR208 ASP209 TYR210 SER211 ILE212 ALA213 GLU214 ALA215 ALA216 PHE217 ASN218 LYS219 GLY220 GLU221 THR222 ALA223 MET224 THR225 ILE226 ASN227 GLY228 PRO229 TRP230 ALA231 TRP232 SER233 ASN234 ILE235 ASP236 THR237 SER238 ALA239 VAL240 ASN241 TYR242 GLY243 VAL244 THR245 VAL246 LEU247 PRO248 THR249 PHE250 LYS251 GLY252 GLN253 PRO254 SER255 LYS256 PRO257 PHE258 VAL259 GLY260 VAL261 LEU262 SER263 ALA264 GLY265 ILE266 ASN267 ALA268 ALA269 SER270 PRO271 ASN272 LYS273 GLU274 LEU275 ALA276 LYS277 GLU278 PHE279 LEU280 GLU281 ASN282 TYR283 LEU284 LEU285 THR286 ASP287 GLU288 GLY289 LEU290 GLU291 ALA292 VAL293 ASN294 LYS295 ASP296 LYS297 PRO298 LEU299 GLY300 ALA301 VAL302 ALA303 LEU304 LYS305 SER306 TYR307 GLU308 GLU309 GLU310 LEU311 ALA312 LYS313 ASP314 PRO315 ARG316 ILE317 ALA318 ALA319 THR320 MET321 GLU322 ASN323 ALA324 GLN325 LYS326 GLY327 GLU328 ILE329 MET330 PRO331 ASN332 ILE333 PRO334 GLN335 MET336 SER337 ALA338 PHE339 TRP340 TYR341 ALA342 VAL343 ARG344 THR345 ALA346 VAL347 ILE348 ASN349 ALA350 ALA351 SER352 GLY353 ARG354 GLN355 THR356 VAL357 ASP358 ALA359 ALA360 LEU361 ALA362 ALA363 ALA364 GLN365 THR366 ASN367 ALA368 ALA369 ALA370 LYS1075 PHE1076 ASN1077 PHE1078 THR1079 GLU1080 ARG1081 ASP1082 LEU1083 THR1084 ARG1085 ASP1086 VAL1087 ASP1088 PHE1089 ASN1090 ILE1091 LYS1092 GLY1093 ASP1094 ASP1095 VAL1096 ILE1097 VAL1098 PHE1099 LEU1100 HIS1101 ILE1102 GLN1103 LYS1104 THR1105 GLY1106 GLY1107 THR1108 THR1109 PHE1110 GLY1111 ARG1112 HIS1113 LEU1114 VAL1115 ARG1116 ASN1117 ILE1118 ARG1119 LEU1120 GLU1121 GLN1122 PRO1123 CYS1124 ASP1125 CYS1126 LYS1127 ALA1128 GLY1129 GLN1130 LYS1131 LYS1132 CYS1133 THR1134 CYS1135 HIS1136 ARG1137 PRO1138 GLY1139 LYS1140 GLN1141 GLU1142 SER1143 TRP1144 LEU1145 PHE1146 SER1147 ARG1148 PHE1149 SER1150 THR1151 GLY1152 TRP1153 SER1154 CYS1155 GLY1156 LEU1157 HIS1158 ALA1159 ASP1160 TRP1161 THR1162 GLU1163 LEU1164 THR1165 ASN1166 CYS1167 VAL1168 PRO1169 VAL1170 ILE1171 MET1172 ASP1173 ARG1182 ASN1183 PHE1184 TYR1185 TYR1186 ILE1187 THR1188 MET1189 LEU1190 ARG1191 ASP1192 PRO1193 VAL1194 SER1195 ARG1196 TYR1197 LEU1198 SER1199 GLU1200 TRP1201 LYS1202 HIS1203 VAL1204 GLN1205 ARG1206 GLY1207 ALA1208 THR1209 TRP1210 LYS1211 THR1212 SER1213 LEU1214 HIS1215 MET1216 CYS1217 ASP1218 GLY1219 ARG1220 SER1221 PRO1222 THR1223 GLN1224 ASP1225 GLU1226 LEU1227 PRO1228 THR1229 CYS1230 TYR1231 ASN1232 GLY1233 ASP1234 ASP1235 TRP1236 SER1237 GLY1238 VAL1239 THR1240 LEU1241 HIS1242 ASP1243 PHE1244 MET1245 ASP1246 CYS1247 PRO1248 SER1249 ASN1250 LEU1251 ALA1252 ASN1253 ASN1254 ARG1255 GLN1256 VAL1257 ARG1258 MET1259 LEU1260 ALA1261 ASP1262 LEU1263 SER1264 LEU1265 VAL1266 GLY1267 CYS1268 TYR1269 ASN1270 LEU1271 SER1272 THR1273 MET1274 ASN1275 GLU1276 SER1277 GLU1278 ARG1279 ASN1280 PRO1281 ILE1282 LEU1283 LEU1284 ALA1285 SER1286 ALA1287 LYS1288 SER1289 ASN1290 LEU1291 LYS1292 ASN1293 MET1294 ALA1295 PHE1296 TYR1297 GLY1298 LEU1299 THR1300 GLU1301 PHE1302 GLN1303 ARG1304 LYS1305 THR1306 GLN1307 TYR1308 LEU1309 PHE1310 GLU1311 ARG1312 THR1313 PHE1314 HIS1315 LEU1316 ARG1317 PHE1318 ILE1319 SER1320 ALA1321 PHE1322 THR1323 GLN1324 ILE1325 ASN1326 SER1327 THR1328 ARG1329 ALA1330 ALA1331 ASN1332 VAL1333 GLU1334 LEU1335 ARG1336 ASP1337 ASP1338 MET1339 ARG1340 SER1341 ARG1342 ILE1343 GLU1344 GLN1345 LEU1346 ASN1347 MET1348 LEU1349 ASP1350 MET1351 GLN1352 LEU1353 TYR1354 GLU1355 PHE1356 ALA1357 LYS1358 ASP1359 LEU1360 PHE1361 LEU1362 GLN1363 ARG1364 TYR1365 GLN1366 PHE1367 VAL1368 ARG1369 GLN1370 ARG1371 GLU1372 ARG1373 GLN1374 GLU1375 GLU1376 ARG1377 LEU1378 LYS1379 ARG1380 ARG1381 GLU1382 GLU1383
Unit 2 ILE2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ALA82 ALA83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA172 ALA173 GLY174 LYS175 TYR176 ASP177 ILE178 LYS179 ASP180 VAL181 GLY182 VAL183 ASP184 ASN185 ALA186 GLY187 ALA188 LYS189 ALA190 GLY191 LEU192 THR193 PHE194 LEU195 VAL196 ASP197 LEU198 ILE199 LYS200 ASN201 LYS202 HIS203 MET204 ASN205 ALA206 ASP207 THR208 ASP209 TYR210 SER211 ILE212 ALA213 GLU214 ALA215 ALA216 PHE217 ASN218 LYS219 GLY220 GLU221 THR222 ALA223 MET224 THR225 ILE226 ASN227 GLY228 PRO229 TRP230 ALA231 TRP232 SER233 ASN234 ILE235 ASP236 THR237 SER238 ALA239 VAL240 ASN241 TYR242 GLY243 VAL244 THR245 VAL246 LEU247 PRO248 THR249 PHE250 LYS251 GLY252 GLN253 PRO254 SER255 LYS256 PRO257 PHE258 VAL259 GLY260 VAL261 LEU262 SER263 ALA264 GLY265 ILE266 ASN267 ALA268 ALA269 SER270 PRO271 ASN272 LYS273 GLU274 LEU275 ALA276 LYS277 GLU278 PHE279 LEU280 GLU281 ASN282 TYR283 LEU284 LEU285 THR286 ASP287 GLU288 GLY289 LEU290 GLU291 ALA292 VAL293 ASN294 LYS295 ASP296 LYS297 PRO298 LEU299 GLY300 ALA301 VAL302 ALA303 LEU304 LYS305 SER306 TYR307 GLU308 GLU309 GLU310 LEU311 ALA312 LYS313 ASP314 PRO315 ARG316 ILE317 ALA318 ALA319 THR320 MET321 GLU322 ASN323 ALA324 GLN325 LYS326 GLY327 GLU328 ILE329 MET330 PRO331 ASN332 ILE333 PRO334 GLN335 MET336 SER337 ALA338 PHE339 TRP340 TYR341 ALA342 VAL343 ARG344 THR345 ALA346 VAL347 ILE348 ASN349 ALA350 ALA351 SER352 GLY353 ARG354 GLN355 THR356 VAL357 ASP358 ALA359 ALA360 LEU361 ALA362 ALA363 ALA364 GLN365 THR366 ASN367 ALA368 ALA369 ALA370 LYS1075 PHE1076 ASN1077 PHE1078 THR1079 GLU1080 ARG1081 ASP1082 LEU1083 THR1084 ARG1085 ASP1086 VAL1087 ASP1088 PHE1089 ASN1090 ILE1091 LYS1092 GLY1093 ASP1094 ASP1095 VAL1096 ILE1097 VAL1098 PHE1099 LEU1100 HIS1101 ILE1102 GLN1103 LYS1104 THR1105 GLY1106 GLY1107 THR1108 THR1109 PHE1110 GLY1111 ARG1112 HIS1113 LEU1114 VAL1115 ARG1116 ASN1117 ILE1118 ARG1119 LEU1120 GLU1121 GLN1122 PRO1123 CYS1124 ASP1125 CYS1126 LYS1127 ALA1128 GLY1129 GLN1130 LYS1131 LYS1132 CYS1133 THR1134 CYS1135 HIS1136 ARG1137 PRO1138 GLY1139 LYS1140 GLN1141 GLU1142 SER1143 TRP1144 LEU1145 PHE1146 SER1147 ARG1148 PHE1149 SER1150 THR1151 GLY1152 TRP1153 SER1154 CYS1155 GLY1156 LEU1157 HIS1158 ALA1159 ASP1160 TRP1161 THR1162 GLU1163 LEU1164 THR1165 ASN1166 CYS1167 VAL1168 PRO1169 VAL1170 ILE1171 MET1172 ASP1173 ARG1182 ASN1183 PHE1184 TYR1185 TYR1186 ILE1187 THR1188 MET1189 LEU1190 ARG1191 ASP1192 PRO1193 VAL1194 SER1195 ARG1196 TYR1197 LEU1198 SER1199 GLU1200 TRP1201 LYS1202 HIS1203 VAL1204 GLN1205 ARG1206 GLY1207 ALA1208 THR1209 TRP1210 LYS1211 THR1212 SER1213 LEU1214 HIS1215 MET1216 CYS1217 ASP1218 GLY1219 ARG1220 SER1221 PRO1222 THR1223 GLN1224 ASP1225 GLU1226 LEU1227 PRO1228 THR1229 CYS1230 TYR1231 ASN1232 GLY1233 ASP1234 ASP1235 TRP1236 SER1237 GLY1238 VAL1239 THR1240 LEU1241 HIS1242 ASP1243 PHE1244 MET1245 ASP1246 CYS1247 PRO1248 SER1249 ASN1250 LEU1251 ALA1252 ASN1253 ASN1254 ARG1255 GLN1256 VAL1257 ARG1258 MET1259 LEU1260 ALA1261 ASP1262 LEU1263 SER1264 LEU1265 VAL1266 GLY1267 CYS1268 TYR1269 ASN1270 LEU1271 SER1272 THR1273 MET1274 ASN1275 GLU1276 SER1277 GLU1278 ARG1279 ASN1280 PRO1281 ILE1282 LEU1283 LEU1284 ALA1285 SER1286 ALA1287 LYS1288 SER1289 ASN1290 LEU1291 LYS1292 ASN1293 MET1294 ALA1295 PHE1296 TYR1297 GLY1298 LEU1299 THR1300 GLU1301 PHE1302 GLN1303 ARG1304 LYS1305 THR1306 GLN1307 TYR1308 LEU1309 PHE1310 GLU1311 ARG1312 THR1313 PHE1314 HIS1315 LEU1316 ARG1317 PHE1318 ILE1319 SER1320 ALA1321 PHE1322 THR1323 GLN1324 ILE1325 ASN1326 SER1327 THR1328 ARG1329 ALA1330 ALA1331 ASN1332 VAL1333 GLU1334 LEU1335 ARG1336 ASP1337 ASP1338 MET1339 ARG1340 SER1341 ARG1342 ILE1343 GLU1344 GLN1345 LEU1346 ASN1347 MET1348 LEU1349 ASP1350 MET1351 GLN1352 LEU1353 TYR1354 GLU1355 PHE1356 ALA1357 LYS1358 ASP1359 LEU1360 PHE1361 LEU1362 GLN1363 ARG1364 TYR1365 GLN1366 PHE1367 VAL1368 ARG1369 GLN1370 ARG1371 GLU1372 ARG1373 GLN1374 GLU1375 GLU1376 ARG1377 LEU1378 LYS1379 ARG1380 ARG1381 GLU1382 GLU1383 ARG1384 ARG1385 TRP1386 ILE1387 ARG1388 GLU1389 ARG1390
Ligands
Unit 3 BDP1 GNS2 IDS3 GNS4 BDP5 GNS6
Unit 4 GLC1 GLC2 GLC3 GLC4
Unit 5 BDP1 GNS2 IDS3 GNS4 BDP5 GNS6 BDP7
Unit 6 GLC1 GLC2 GLC3 GLC4
Unit 7 NPO2007 A3P2012 EDO2013 EDO2014 EDO2015 EDO2016 EDO2017 EDO2018 EDO2019 EDO2020 EDO2021 EDO2022 EDO2023 TLA2024 TLA2025 NA2026 NA2027 NA2028 NA2029 CL2030 CL2031
Unit 8 NPO1408 A3P1413 EDO1414 EDO1415 EDO1416 EDO1417 TLA1418 NA1419 NA1420 CL1421
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany