5T00 - Sequence, Chains, Asymmetric and Biological Units

• Title: HUMAN CTCF ZNF3-7 AND METHYLATED DNA COMPLEX
• Keywords: CCCTC-BINDING FACTOR, ZINC FINGER, CTCF, TRANSCRIPTION REGUL COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5T00	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TRANSCRIPTIONAL REPRESSOR CTCF	A	143	2306	0
2	Other macromolecule	DNA (5'-TAG(5CM)GCCCCCTGCTGGC-3')	B	17	502	33
3	Other macromolecule	DNA (5'-GCCAGCAGGGGG(5CM)GCTA-3')	C	17	511	33
4	Protein	TRANSCRIPTIONAL REPRESSOR CTCF	D	143	2289	0
5	Other macromolecule	DNA (5'-TAG(5CM)GCCCCCTGCTGGC-3')	E	17	502	33
6	Other macromolecule	DNA (5'-GCCAGCAGGGGG(5CM)GCTA-3')	F	17	511	33
7	Ligand	TRANSCRIPTIONAL REPRESSOR CTCF	A	5	0	5
8	Ligand	TRANSCRIPTIONAL REPRESSOR CTCF	D	5	0	5
9	Water			97	0	97
total				461	6621	239

Proteins

Unit 1

SER 320 PRO 321 HIS 322 LYS 323 CYS 324 PRO 325 ASP 326 CYS 327 ASP 328 MET 329 ALA 330 PHE 331 VAL 332 THR 333 SER 334 GLY 335 GLU 336 LEU 337 VAL 338 ARG 339 HIS 340 ARG 341 ARG 342 TYR 343 LYS 344 HIS 345 THR 346 HIS 347 GLU 348 LYS 349 PRO 350 PHE 351 LYS 352 CYS 353 SER 354 MET 355 CYS 356 ASP 357 TYR 358 ALA 359 SER 360 VAL 361 GLU 362 VAL 363 SER 364 LYS 365 LEU 366 LYS 367 ARG 368 HIS 369 ILE 370 ARG 371 SER 372 HIS 373 THR 374 GLY 375 GLU 376 ARG 377 PRO 378 PHE 379 GLN 380 CYS 381 SER 382 LEU 383 CYS 384 SER 385 TYR 386 ALA 387 SER 388 ARG 389 ASP 390 THR 391 TYR 392 LYS 393 LEU 394 LYS 395 ARG 396 HIS 397 MET 398 ARG 399 THR 400 HIS 401 SER 402 GLY 403 GLU 404 LYS 405 PRO 406 TYR 407 GLU 408 CYS 409 TYR 410 ILE 411 CYS 412 HIS 413 ALA 414 ARG 415 PHE 416 THR 417 GLN 418 SER 419 GLY 420 THR 421 MET 422 LYS 423 MET 424 HIS 425 ILE 426 LEU 427 GLN 428 LYS 429 HIS 430 THR 431 GLU 432 ASN 433 VAL 434 ALA 435 LYS 436 PHE 437 HIS 438 CYS 439 PRO 440 HIS 441 CYS 442 ASP 443 THR 444 VAL 445 ILE 446 ALA 447 ARG 448 LYS 449 SER 450 ASP 451 LEU 452 GLY 453 VAL 454 HIS 455 LEU 456 ARG 457 LYS 458 GLN 459 HIS 460 SER 461 TYR 462

Unit 4

HIS 322 LYS 323 CYS 324 PRO 325 ASP 326 CYS 327 ASP 328 MET 329 ALA 330 PHE 331 VAL 332 THR 333 SER 334 GLY 335 GLU 336 LEU 337 VAL 338 ARG 339 HIS 340 ARG 341 ARG 342 TYR 343 LYS 344 HIS 345 THR 346 HIS 347 GLU 348 LYS 349 PRO 350 PHE 351 LYS 352 CYS 353 SER 354 MET 355 CYS 356 ASP 357 TYR 358 ALA 359 SER 360 VAL 361 GLU 362 VAL 363 SER 364 LYS 365 LEU 366 LYS 367 ARG 368 HIS 369 ILE 370 ARG 371 SER 372 HIS 373 THR 374 GLY 375 GLU 376 ARG 377 PRO 378 PHE 379 GLN 380 CYS 381 SER 382 LEU 383 CYS 384 SER 385 TYR 386 ALA 387 SER 388 ARG 389 ASP 390 THR 391 TYR 392 LYS 393 LEU 394 LYS 395 ARG 396 HIS 397 MET 398 ARG 399 THR 400 HIS 401 SER 402 GLY 403 GLU 404 LYS 405 PRO 406 TYR 407 GLU 408 CYS 409 TYR 410 ILE 411 CYS 412 HIS 413 ALA 414 ARG 415 PHE 416 THR 417 GLN 418 SER 419 GLY 420 THR 421 MET 422 LYS 423 MET 424 HIS 425 ILE 426 LEU 427 GLN 428 LYS 429 HIS 430 THR 431 GLU 432 ASN 433 VAL 434 ALA 435 LYS 436 PHE 437 HIS 438 CYS 439 PRO 440 HIS 441 CYS 442 ASP 443 THR 444 VAL 445 ILE 446 ALA 447 ARG 448 LYS 449 SER 450 ASP 451 LEU 452 GLY 453 VAL 454 HIS 455 LEU 456 ARG 457 LYS 458 GLN 459 HIS 460 SER 461 TYR 462 ILE 463 GLU 464

Other macromolecules

Unit 2	DT 1 DA 2 DG 3 5CM 4 DG 5 DC 6 DC 7 DC 8 DC 9 DC 10 DT 11 DG 12 DC 13 DT 14 DG 15 DG 16 DC 17
Unit 3	DG 1 DC 2 DC 3 DA 4 DG 5 DC 6 DA 7 DG 8 DG 9 DG 10 DG 11 DG 12 5CM 13 DG 14 DC 15 DT 16 DA 17
Unit 5	DT 1 DA 2 DG 3 5CM 4 DG 5 DC 6 DC 7 DC 8 DC 9 DC 10 DT 11 DG 12 DC 13 DT 14 DG 15 DG 16 DC 17
Unit 6	DG 1 DC 2 DC 3 DA 4 DG 5 DC 6 DA 7 DG 8 DG 9 DG 10 DG 11 DG 12 5CM 13 DG 14 DC 15 DT 16 DA 17

Ligands

Unit 7	ZN 501 ZN 502 ZN 503 ZN 504 ZN 505
Unit 8	ZN 501 ZN 502 ZN 503 ZN 504 ZN 505