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Sequence, Chains, Asymmetric and Biological Units

Title CRYO EM STRUCTURE OF THE CONJUGATIVE RELAXASE TRAI OF THE F/ SYSTEM
Keywords RELAXASE, CRYO EM, HELICASE, TRANSLOCASE, TRANSFERASE
Experiment ELECTRON MICROSCOPY
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5N8O     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA HELICASE I  A 1432 10991 0
2  Other macromolecule    C 18 360 0
total       1450 11351 0
Proteins
Unit 1 MET1 MET2 SER3 ILE4 ALA5 GLN6 VAL7 ARG8 SER9 ALA10 GLY11 SER12 ALA13 GLY14 ASN15 TYR16 TYR17 THR18 ASP19 LYS20 ASP21 ASN22 TYR23 TYR24 VAL25 LEU26 GLY27 SER28 MET29 GLY30 GLU31 ARG32 TRP33 ALA34 GLY35 LYS36 GLY37 ALA38 GLU39 GLN40 LEU41 GLY42 LEU43 GLN44 GLY45 SER46 VAL47 ASP48 LYS49 ASP50 VAL51 PHE52 THR53 ARG54 LEU55 LEU56 GLU57 GLY58 ARG59 LEU60 PRO61 ASP62 GLY63 ALA64 ASP65 LEU66 SER67 ARG68 MET69 GLN70 ASP71 GLY72 SER73 ASN74 LYS75 HIS76 ARG77 PRO78 GLY79 TYR80 ASP81 LEU82 THR83 PHE84 SER85 ALA86 PRO87 LYS88 SER89 VAL90 SER91 MET92 MET93 ALA94 MET95 LEU96 GLY97 GLY98 ASP99 LYS100 ARG101 LEU102 ILE103 ASP104 ALA105 HIS106 ASN107 GLN108 ALA109 VAL110 ASP111 PHE112 ALA113 VAL114 ARG115 GLN116 VAL117 GLU118 ALA119 LEU120 ALA121 SER122 THR123 ARG124 VAL125 MET126 THR127 ASP128 GLY129 GLN130 SER131 GLU132 THR133 VAL134 LEU135 THR136 GLY137 ASN138 LEU139 VAL140 MET141 ALA142 LEU143 PHE144 ASN145 HIS146 ASP147 THR148 SER149 ARG150 ASP151 GLN152 GLU153 PRO154 GLN155 LEU156 HIS157 THR158 HIS159 ALA160 VAL161 VAL162 ALA163 ASN164 VAL165 THR166 GLN167 HIS168 ASN169 GLY170 GLU171 TRP172 LYS173 THR174 LEU175 SER176 SER177 ASP178 LYS179 VAL180 GLY181 LYS182 THR183 GLY184 PHE185 ILE186 GLU187 ASN188 VAL189 TYR190 ALA191 ASN192 GLN193 ILE194 ALA195 PHE196 GLY197 ARG198 LEU199 TYR200 ARG201 GLU202 LYS203 LEU204 LYS205 GLU206 GLN207 VAL208 GLU209 ALA210 LEU211 GLY212 TYR213 GLU214 THR215 GLU216 VAL217 VAL218 GLY219 LYS220 HIS221 GLY222 MET223 TRP224 GLU225 MET226 PRO227 GLY228 VAL229 PRO230 VAL231 GLU232 ALA233 PHE234 SER235 VAL268 ASP269 PRO270 GLU271 ILE272 ARG273 MET274 ALA275 GLU276 TRP277 MET278 GLN279 THR280 LEU281 LYS282 GLU283 THR284 GLY285 PHE286 ASP287 ILE288 ARG289 ALA290 TYR291 ARG292 ASP293 ALA294 ALA295 ASP296 GLN297 ARG298 THR299 GLU300 ILE301 ARG302 THR303 GLN304 ALA305 PRO306 ASP315 VAL316 GLN317 GLN318 ALA319 VAL320 THR321 GLN322 ALA323 ILE324 ALA325 GLY326 LEU327 SER328 GLU329 ARG330 LYS331 VAL332 GLN333 PHE334 THR335 TYR336 THR337 ASP338 VAL339 LEU340 ALA341 ARG342 THR343 VAL344 GLY345 ILE346 LEU347 PRO348 PRO349 GLU350 ASN351 GLY352 VAL353 ILE354 GLU355 ARG356 ALA357 ARG358 ALA359 GLY360 ILE361 ASP362 GLU363 ALA364 ILE365 SER366 ARG367 GLU368 GLN369 LEU370 ILE371 PRO372 LEU373 ASP374 ARG375 GLU376 LYS377 GLY378 LEU379 PHE380 THR381 SER382 GLY383 ILE384 HIS385 VAL386 LEU387 ASP388 GLU389 LEU390 SER391 VAL392 ARG393 ALA394 LEU395 SER396 ARG397 ASP398 ILE399 MET400 LYS401 GLN402 ASN403 ARG404 VAL405 THR406 VAL407 HIS408 PRO409 GLU410 LYS411 SER412 VAL413 PRO414 ARG415 THR416 ALA417 GLY418 TYR419 SER420 ASP421 ALA422 VAL423 SER424 VAL425 LEU426 ALA427 GLN428 ASP429 ARG430 PRO431 SER432 LEU433 ALA434 ILE435 VAL436 SER437 GLY438 GLN439 GLY440 GLY441 ALA442 ALA443 GLY444 GLN445 ARG446 GLU447 ARG448 VAL449 ALA450 GLU451 LEU452 VAL453 MET454 MET455 ALA456 ARG457 GLU458 GLN459 GLY460 ARG461 GLU462 VAL463 GLN464 ILE465 ILE466 ALA467 ALA468 ASP469 ARG470 ARG471 SER472 GLN473 MET474 ASN475 LEU476 LYS477 GLN478 ASP479 GLU480 ARG481 LEU482 SER483 GLY484 GLU485 LEU486 ILE487 THR488 GLY489 ARG490 ARG491 GLN492 LEU493 LEU494 GLU495 GLY496 MET497 ALA498 PHE499 THR500 PRO501 GLY502 SER503 THR504 VAL505 ILE506 VAL507 ASP508 GLN509 GLY510 GLU511 LYS512 LEU513 SER514 LEU515 LYS516 GLU517 THR518 LEU519 THR520 LEU521 LEU522 ASP523 GLY524 ALA525 ALA526 ARG527 HIS528 ASN529 VAL530 GLN531 VAL532 LEU533 ILE534 THR535 ASP536 SER537 GLY538 GLN539 ARG540 THR541 GLY542 THR543 GLY544 SER545 ALA546 LEU547 MET548 ALA549 MET550 LYS551 ASP552 ALA553 GLY554 VAL555 ASN556 THR557 TYR558 ARG559 TRP560 GLN561 GLY562 GLY563 GLU564 GLN565 ARG566 PRO567 ALA568 THR569 ILE570 ILE571 SER572 GLU573 PRO574 ASP575 ARG576 ASN577 VAL578 ARG579 TYR580 ALA581 ARG582 LEU583 ALA584 GLY585 ASP586 PHE587 ALA588 ALA589 SER590 VAL591 LYS592 ALA593 GLY594 GLU595 GLU596 SER597 VAL598 ALA599 GLN600 VAL601 SER602 GLY603 VAL604 ARG605 GLU606 GLN607 ALA608 ILE609 LEU610 THR611 GLN612 ALA613 ILE614 ARG615 SER616 GLU617 LEU618 LYS619 THR620 GLN621 GLY622 VAL623 LEU624 GLY625 HIS626 PRO627 GLU628 VAL629 THR630 MET631 THR632 ALA633 LEU634 SER635 PRO636 VAL637 TRP638 LEU639 ASP640 SER641 ARG642 SER643 ARG644 TYR645 LEU646 ARG647 ASP648 MET649 TYR650 ARG651 PRO652 GLY653 MET654 VAL655 MET656 GLU657 GLN658 TRP659 ASN660 PRO661 GLU662 THR663 ARG664 SER665 HIS666 ASP667 ARG668 TYR669 VAL670 ILE671 ASP672 ARG673 VAL674 THR675 ALA676 GLN677 SER678 HIS679 SER680 LEU681 THR682 LEU683 ARG684 ASP685 ALA686 GLN687 GLY688 GLU689 THR690 GLN691 VAL692 VAL693 ARG694 ILE695 SER696 SER697 LEU698 ASP699 SER700 SER701 TRP702 SER703 LEU704 PHE705 ARG706 PRO707 GLU708 LYS709 MET710 PRO711 VAL712 ALA713 ASP714 GLY715 GLU716 ARG717 LEU718 ARG719 VAL720 THR721 GLY722 LYS723 ILE724 PRO725 GLY726 LEU727 ARG728 VAL729 SER730 GLY731 GLY732 ASP733 ARG734 LEU735 GLN736 VAL737 ALA738 SER739 VAL740 SER741 GLU742 ASP743 ALA744 MET745 THR746 VAL747 VAL748 VAL749 PRO750 GLY751 ARG752 ALA753 GLU754 PRO755 ALA756 SER757 LEU758 PRO759 VAL760 SER761 ASP762 SER763 PRO764 PHE765 THR766 ALA767 LEU768 LYS769 LEU770 GLU771 ASN772 GLY773 TRP774 VAL775 GLU776 THR777 PRO778 GLY779 HIS780 SER781 VAL782 SER783 ASP784 SER785 ALA786 THR787 VAL788 PHE789 ALA790 SER791 VAL792 THR793 GLN794 MET795 ALA796 MET797 ASN799 ALA800 THR801 LEU802 ASN803 GLY804 LEU805 ALA806 ARG807 SER808 GLY809 ARG810 ASP811 VAL812 ARG813 LEU814 TYR815 SER816 SER817 LEU818 ASP819 GLU820 THR821 ARG822 THR823 ALA824 GLU825 LYS826 LEU827 ALA828 ARG829 HIS830 PRO831 SER832 PHE833 THR834 VAL835 VAL836 SER837 GLU838 GLN839 ILE840 LYS841 ALA842 ARG843 ALA844 GLY845 GLU846 THR847 LEU848 LEU849 GLU850 THR851 ALA852 ILE853 SER854 LEU855 GLN856 LYS857 ALA858 GLY859 LEU860 HIS861 THR862 PRO863 ALA864 GLN865 GLN866 ALA867 ILE868 HIS869 LEU870 ALA871 LEU872 PRO873 VAL874 LEU875 GLU876 SER877 LYS878 ASN879 LEU880 ALA881 PHE882 SER883 MET884 VAL885 ASP886 LEU887 LEU888 THR889 GLU890 ALA891 LYS892 SER893 PHE894 ALA895 ALA896 GLU897 GLY898 THR899 GLY900 PHE901 THR902 GLU903 LEU904 GLY905 GLY906 GLU907 ILE908 ASN909 ALA910 GLN911 ILE912 LYS913 ARG914 GLY915 ASP916 LEU917 LEU918 TYR919 VAL920 ASP921 VAL922 ALA923 LYS924 GLY925 TYR926 GLY927 THR928 GLY929 LEU930 LEU931 VAL932 SER933 ARG934 ALA935 SER936 TYR937 GLU938 ALA939 GLU940 LYS941 SER942 ILE943 LEU944 ARG945 HIS946 ILE947 LEU948 GLU949 GLY950 LYS951 GLU952 ALA953 VAL954 THR955 PRO956 LEU957 MET958 GLU959 ARG960 VAL961 PRO962 GLY963 GLU964 LEU965 MET966 GLU967 THR968 LEU969 THR970 SER971 GLY972 GLN973 ARG974 ALA975 ALA976 THR977 ARG978 MET979 ILE980 LEU981 GLU982 THR983 SER984 ASP985 ARG986 PHE987 THR988 VAL989 VAL990 GLN991 GLY992 TYR993 ALA994 GLY995 VAL996 GLY997 LYS998 THR999 THR1000 GLN1001 PHE1002 ARG1003 ALA1004 VAL1005 MET1006 SER1007 ALA1008 VAL1009 ASN1010 MET1011 LEU1012 PRO1013 ALA1014 SER1015 GLU1016 ARG1017 PRO1018 ARG1019 VAL1020 VAL1021 GLY1022 LEU1023 GLY1024 PRO1025 THR1026 HIS1027 ARG1028 ALA1029 VAL1030 GLY1031 GLU1032 MET1033 ARG1034 SER1035 ALA1036 GLY1037 VAL1038 ASP1039 ALA1040 GLN1041 THR1042 LEU1043 ALA1044 SER1045 PHE1046 LEU1047 HIS1048 ASP1049 THR1050 GLN1051 LEU1052 GLN1053 GLN1054 ARG1055 SER1056 GLY1057 GLU1058 THR1059 PRO1060 ASP1061 PHE1062 SER1063 ASN1064 THR1065 LEU1066 PHE1067 LEU1068 LEU1069 ASP1070 GLU1071 SER1072 SER1073 MET1074 VAL1075 GLY1076 ASN1077 THR1078 GLU1079 MET1080 ALA1081 ARG1082 ALA1083 TYR1084 ALA1085 LEU1086 ILE1087 ALA1088 ALA1089 GLY1090 GLY1091 GLY1092 ARG1093 ALA1094 VAL1095 ALA1096 SER1097 GLY1098 ASP1099 THR1100 ASP1101 GLN1102 LEU1103 GLN1104 ALA1105 ILE1106 ALA1107 PRO1108 GLY1109 GLN1110 SER1111 PHE1112 ARG1113 LEU1114 GLN1115 GLN1116 THR1117 ARG1118 SER1119 ALA1120 ALA1121 ASP1122 VAL1123 VAL1124 ILE1125 MET1126 LYS1127 GLU1128 ILE1129 VAL1130 ARG1131 GLN1132 THR1133 PRO1134 GLU1135 LEU1136 ARG1137 GLU1138 ALA1139 VAL1140 TYR1141 SER1142 LEU1143 ILE1144 ASN1145 ARG1146 ASP1147 VAL1148 GLU1149 ARG1150 ALA1151 LEU1152 SER1153 GLY1154 LEU1155 GLU1156 SER1157 VAL1158 LYS1159 PRO1160 SER1161 GLN1162 VAL1163 PRO1164 ARG1165 LEU1166 GLU1167 GLY1168 ALA1169 TRP1170 ALA1171 PRO1172 GLU1173 HIS1174 SER1175 VAL1176 THR1177 GLU1178 PHE1179 SER1180 HIS1181 SER1182 GLN1183 GLU1184 ALA1185 LYS1186 LEU1187 ALA1188 GLU1189 ALA1190 GLN1191 GLN1192 LYS1193 ALA1194 MET1195 LEU1196 LYS1197 GLY1198 GLU1199 ALA1200 PHE1201 PRO1202 ASP1203 ILE1204 PRO1205 MET1206 THR1207 LEU1208 TYR1209 GLU1210 ALA1211 ILE1212 VAL1213 ARG1214 ASP1215 TYR1216 THR1217 GLY1218 ARG1219 THR1220 PRO1221 GLU1222 ALA1223 ARG1224 GLU1225 GLN1226 THR1227 LEU1228 ILE1229 VAL1230 THR1231 HIS1232 LEU1233 ASN1234 GLU1235 ASP1236 ARG1237 ARG1238 VAL1239 LEU1240 ASN1241 SER1242 MET1243 ILE1244 HIS1245 ASP1246 ALA1247 ARG1248 GLU1249 LYS1250 ALA1251 GLY1252 GLU1253 LEU1254 GLY1255 LYS1256 GLU1257 GLN1258 VAL1259 MET1260 VAL1261 PRO1262 VAL1263 LEU1264 ASN1265 THR1266 ALA1267 ASN1268 ILE1269 ARG1270 ASP1271 GLY1272 GLU1273 LEU1274 ARG1275 ARG1276 LEU1277 SER1278 THR1279 TRP1280 GLU1281 LYS1282 ASN1283 PRO1284 ASP1285 ALA1286 LEU1287 ALA1288 LEU1289 VAL1290 ASP1291 ASN1292 VAL1293 TYR1294 HIS1295 ARG1296 ILE1297 ALA1298 GLY1299 ILE1300 SER1301 LYS1302 ASP1303 ASP1304 GLY1305 LEU1306 ILE1307 THR1308 LEU1309 GLN1310 ASP1311 ALA1312 GLU1313 GLY1314 ASN1315 THR1316 ARG1317 LEU1318 ILE1319 SER1320 PRO1321 ARG1322 GLU1323 ALA1324 VAL1325 ALA1326 GLU1327 GLY1328 VAL1329 THR1330 LEU1331 TYR1332 THR1333 PRO1334 ASP1335 LYS1336 ILE1337 ARG1338 VAL1339 GLY1340 THR1341 GLY1342 ASP1343 ARG1344 MET1345 ARG1346 PHE1347 THR1348 LYS1349 SER1350 ASP1351 ARG1352 GLU1353 ARG1354 GLY1355 TYR1356 VAL1357 ALA1358 ASN1359 SER1360 VAL1361 TRP1362 THR1363 VAL1364 THR1365 ALA1366 VAL1367 SER1368 GLY1369 ASP1370 SER1371 VAL1372 THR1373 LEU1374 SER1375 ASP1376 GLY1377 GLN1378 GLN1379 THR1380 ARG1381 VAL1382 ILE1383 ARG1384 PRO1385 GLY1386 GLN1387 GLU1388 ARG1389 ALA1390 GLU1391 GLN1392 HIS1393 ILE1394 ASP1395 LEU1396 ALA1397 TYR1398 ALA1399 ILE1400 THR1401 ALA1402 HIS1403 GLY1404 ALA1405 GLN1406 GLY1407 ALA1408 SER1409 GLU1410 THR1411 PHE1412 ALA1413 ILE1414 ALA1415 LEU1416 GLU1417 GLY1418 THR1419 GLU1420 GLY1421 ASN1422 ARG1423 LYS1424 LEU1425 MET1426 ALA1427 GLY1428 PHE1429 GLU1430 SER1431 ALA1432 TYR1433 VAL1434 ALA1435 LEU1436 SER1437 ARG1438 MET1439 LYS1440 GLN1441 HIS1442 VAL1443 GLN1444 VAL1445 TYR1446 THR1447 ASP1448 ASN1449 ARG1450 GLN1451 GLY1452 TRP1453 THR1454 ASP1455 ALA1456 ILE1457 ASN1458 ASN1459 ALA1460 VAL1461 GLN1462 LYS1463 GLY1464 THR1465 ALA1466 HIS1467 ASP1468 VAL1469 LEU1470 GLU1471 PRO1472 LYS1473
Other macromolecules
Unit 2 DT5 DT6 DT7 DT8 DT9 DT10 DT11 DT12 DT13 DT14 DT15 DT16 DT17 DT18 DT19 DT20 DT21 DT22
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany