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Sequence, Chains, Asymmetric and Biological Units

Title CLATHRIN HEAVY CHAIN N-TERMINAL DOMAIN BOUND TO A CLATHRIN-B FROM HEPATITIS D VIRUS LARGE ANTIGEN (CLADE 1)
Keywords ENDOCYTOSIS, HEPATITIS DELTA VIRUS, HDAG-L
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5M5U     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CLATHRIN HEAVY CHAIN 1  A 360 2811 0
2  Protein   CLATHRIN HEAVY CHAIN 1  B 360 2811 0
3  Protein   LARGE DELTA ANTIGEN  E 7 53 0
4  Protein   LARGE DELTA ANTIGEN  F 7 53 0
5  Protein   LARGE DELTA ANTIGEN  G 6 47 0
6  Protein   LARGE DELTA ANTIGEN  H 6 47 0
7  Ligand   CLATHRIN HEAVY CHAIN 1  A 1 0 6
8 Water     436 0 437
total       1183 5822 443
Proteins
Unit 1 ILE4 LEU5 PRO6 ILE7 ARG8 PHE9 GLN10 GLU11 HIS12 LEU13 GLN14 LEU15 GLN16 ASN17 LEU18 GLY19 ILE20 ASN21 PRO22 ALA23 ASN24 ILE25 GLY26 PHE27 SER28 THR29 LEU30 THR31 MET32 GLU33 SER34 ASP35 LYS36 PHE37 ILE38 CYS39 ILE40 ARG41 GLU42 LYS43 VAL44 GLY45 GLU46 GLN47 ALA48 GLN49 VAL50 VAL51 ILE52 ILE53 ASP54 MET55 ASN56 ASP57 PRO58 SER59 ASN60 PRO61 ILE62 ARG63 ARG64 PRO65 ILE66 SER67 ALA68 ASP69 SER70 ALA71 ILE72 MET73 ASN74 PRO75 ALA76 SER77 LYS78 VAL79 ILE80 ALA81 LEU82 LYS83 ALA84 GLY85 LYS86 THR87 LEU88 GLN89 ILE90 PHE91 ASN92 ILE93 GLU94 MET95 LYS96 SER97 LYS98 MET99 LYS100 ALA101 HIS102 THR103 MET104 THR105 ASP106 ASP107 VAL108 THR109 PHE110 TRP111 LYS112 TRP113 ILE114 SER115 LEU116 ASN117 THR118 VAL119 ALA120 LEU121 VAL122 THR123 ASP124 ASN125 ALA126 VAL127 TYR128 HIS129 TRP130 SER131 MET132 GLU133 GLY134 GLU135 SER136 GLN137 PRO138 VAL139 LYS140 MET141 PHE142 ASP143 ARG144 HIS145 SER146 SER147 LEU148 ALA149 GLY150 CYS151 GLN152 ILE153 ILE154 ASN155 TYR156 ARG157 THR158 ASP159 ALA160 LYS161 GLN162 LYS163 TRP164 LEU165 LEU166 LEU167 THR168 GLY169 ILE170 SER171 ALA172 GLN173 GLN174 ASN175 ARG176 VAL177 VAL178 GLY179 ALA180 MET181 GLN182 LEU183 TYR184 SER185 VAL186 ASP187 ARG188 LYS189 VAL190 SER191 GLN192 PRO193 ILE194 GLU195 GLY196 HIS197 ALA198 ALA199 SER200 PHE201 ALA202 GLN203 PHE204 LYS205 MET206 GLU207 GLY208 ASN209 ALA210 GLU211 GLU212 SER213 THR214 LEU215 PHE216 CYS217 PHE218 ALA219 VAL220 ARG221 GLY222 GLN223 ALA224 GLY225 GLY226 LYS227 LEU228 HIS229 ILE230 ILE231 GLU232 VAL233 GLY234 THR235 PRO236 PRO237 THR238 GLY239 ASN240 GLN241 PRO242 PHE243 PRO244 LYS245 LYS246 ALA247 VAL248 ASP249 VAL250 PHE251 PHE252 PRO253 PRO254 GLU255 ALA256 GLN257 ASN258 ASP259 PHE260 PRO261 VAL262 ALA263 MET264 GLN265 ILE266 SER267 GLU268 LYS269 HIS270 ASP271 VAL272 VAL273 PHE274 LEU275 ILE276 THR277 LYS278 TYR279 GLY280 TYR281 ILE282 HIS283 LEU284 TYR285 ASP286 LEU287 GLU288 THR289 GLY290 THR291 CYS292 ILE293 TYR294 MET295 ASN296 ARG297 ILE298 SER299 GLY300 GLU301 THR302 ILE303 PHE304 VAL305 THR306 ALA307 PRO308 HIS309 GLU310 ALA311 THR312 ALA313 GLY314 ILE315 ILE316 GLY317 VAL318 ASN319 ARG320 LYS321 GLY322 GLN323 VAL324 LEU325 SER326 VAL327 CYS328 VAL329 GLU330 GLU331 GLU332 ASN333 ILE334 ILE335 PRO336 TYR337 ILE338 THR339 ASN340 VAL341 LEU342 GLN343 ASN344 PRO345 ASP346 LEU347 ALA348 LEU349 ARG350 MET351 ALA352 VAL353 ARG354 ASN355 ASN356 LEU357 ALA358 GLY359 ALA360 GLU361 GLU362 LEU363
Unit 2 ILE4 LEU5 PRO6 ILE7 ARG8 PHE9 GLN10 GLU11 HIS12 LEU13 GLN14 LEU15 GLN16 ASN17 LEU18 GLY19 ILE20 ASN21 PRO22 ALA23 ASN24 ILE25 GLY26 PHE27 SER28 THR29 LEU30 THR31 MET32 GLU33 SER34 ASP35 LYS36 PHE37 ILE38 CYS39 ILE40 ARG41 GLU42 LYS43 VAL44 GLY45 GLU46 GLN47 ALA48 GLN49 VAL50 VAL51 ILE52 ILE53 ASP54 MET55 ASN56 ASP57 PRO58 SER59 ASN60 PRO61 ILE62 ARG63 ARG64 PRO65 ILE66 SER67 ALA68 ASP69 SER70 ALA71 ILE72 MET73 ASN74 PRO75 ALA76 SER77 LYS78 VAL79 ILE80 ALA81 LEU82 LYS83 ALA84 GLY85 LYS86 THR87 LEU88 GLN89 ILE90 PHE91 ASN92 ILE93 GLU94 MET95 LYS96 SER97 LYS98 MET99 LYS100 ALA101 HIS102 THR103 MET104 THR105 ASP106 ASP107 VAL108 THR109 PHE110 TRP111 LYS112 TRP113 ILE114 SER115 LEU116 ASN117 THR118 VAL119 ALA120 LEU121 VAL122 THR123 ASP124 ASN125 ALA126 VAL127 TYR128 HIS129 TRP130 SER131 MET132 GLU133 GLY134 GLU135 SER136 GLN137 PRO138 VAL139 LYS140 MET141 PHE142 ASP143 ARG144 HIS145 SER146 SER147 LEU148 ALA149 GLY150 CYS151 GLN152 ILE153 ILE154 ASN155 TYR156 ARG157 THR158 ASP159 ALA160 LYS161 GLN162 LYS163 TRP164 LEU165 LEU166 LEU167 THR168 GLY169 ILE170 SER171 ALA172 GLN173 GLN174 ASN175 ARG176 VAL177 VAL178 GLY179 ALA180 MET181 GLN182 LEU183 TYR184 SER185 VAL186 ASP187 ARG188 LYS189 VAL190 SER191 GLN192 PRO193 ILE194 GLU195 GLY196 HIS197 ALA198 ALA199 SER200 PHE201 ALA202 GLN203 PHE204 LYS205 MET206 GLU207 GLY208 ASN209 ALA210 GLU211 GLU212 SER213 THR214 LEU215 PHE216 CYS217 PHE218 ALA219 VAL220 ARG221 GLY222 GLN223 ALA224 GLY225 GLY226 LYS227 LEU228 HIS229 ILE230 ILE231 GLU232 VAL233 GLY234 THR235 PRO236 PRO237 THR238 GLY239 ASN240 GLN241 PRO242 PHE243 PRO244 LYS245 LYS246 ALA247 VAL248 ASP249 VAL250 PHE251 PHE252 PRO253 PRO254 GLU255 ALA256 GLN257 ASN258 ASP259 PHE260 PRO261 VAL262 ALA263 MET264 GLN265 ILE266 SER267 GLU268 LYS269 HIS270 ASP271 VAL272 VAL273 PHE274 LEU275 ILE276 THR277 LYS278 TYR279 GLY280 TYR281 ILE282 HIS283 LEU284 TYR285 ASP286 LEU287 GLU288 THR289 GLY290 THR291 CYS292 ILE293 TYR294 MET295 ASN296 ARG297 ILE298 SER299 GLY300 GLU301 THR302 ILE303 PHE304 VAL305 THR306 ALA307 PRO308 HIS309 GLU310 ALA311 THR312 ALA313 GLY314 ILE315 ILE316 GLY317 VAL318 ASN319 ARG320 LYS321 GLY322 GLN323 VAL324 LEU325 SER326 VAL327 CYS328 VAL329 GLU330 GLU331 GLU332 ASN333 ILE334 ILE335 PRO336 TYR337 ILE338 THR339 ASN340 VAL341 LEU342 GLN343 ASN344 PRO345 ASP346 LEU347 ALA348 LEU349 ARG350 MET351 ALA352 VAL353 ARG354 ASN355 ASN356 LEU357 ALA358 GLY359 ALA360 GLU361 GLU362 LEU363
Unit 3 SER1 ASP2 ILE3 LEU4 PHE5 PRO6 ALA7
Unit 4 SER1 ASP2 ILE3 LEU4 PHE5 PRO6 ALA7
Unit 5 ASP2 ILE3 LEU4 PHE5 PRO6 ALA7
Unit 6 ASP2 ILE3 LEU4 PHE5 PRO6 ALA7
Ligands
Unit 7 GOL401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany