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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF COPROHEME BOUND HEMQ FROM LISTERIA MONOCYTOGENE
Keywords HEMQ, HEME BIOSYNTHESIS, COPROHEME, HEME B, GRAM-POSITIVE PA OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5LOQ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  A 248 3960 0
2  Protein   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  B 233 3762 0
3  Protein   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  C 237 3817 0
4  Protein   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  D 250 3989 0
5  Protein   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  E 235 3797 0
6  Ligand   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  A 3 0 104
7  Ligand   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  B 3 0 104
8  Ligand   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  C 2 0 82
9  Ligand   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  D 3 0 104
10  Ligand   PUTATIVE HEME-DEPENDENT PEROXIDASE LMO2113  E 3 0 104
11 Water     713 0 713
total       1930 19325 1211
Proteins
Unit 1 ALA4 VAL5 LYS6 THR7 LEU8 ASP9 GLY10 TRP11 PHE12 CYS13 LEU14 HIS15 ASP16 PHE17 ARG18 SER19 ILE20 ASP21 TRP22 ALA23 ALA24 TRP25 ARG26 GLU27 LEU28 ASN29 PRO30 GLY31 ASN32 GLN33 GLU34 LEU35 MET36 LEU37 ASN38 GLU39 LEU40 SER41 HIS42 PHE43 LEU44 SER45 ASP46 MET47 GLU48 ILE49 THR50 LYS51 ASN52 ILE53 GLY54 GLU55 GLY56 GLU57 HIS58 THR59 ILE60 TYR61 SER62 ILE63 LEU64 GLY65 GLN66 LYS67 ALA68 ASP69 LEU70 VAL71 PHE72 PHE73 THR74 LEU75 ARG76 ASP77 SER78 LEU79 GLU80 ALA81 LEU82 ASN83 GLU84 VAL85 GLU86 ASN87 ARG88 PHE89 ASN90 LYS91 LEU92 ALA93 ILE94 ALA95 ASP96 TYR97 LEU98 LEU99 PRO100 THR101 TYR102 SER103 TYR104 ILE105 SER106 VAL107 VAL108 GLU109 LEU110 SER111 ASN112 TYR113 LEU114 ALA115 SER116 HIS117 MET118 ALA119 GLY120 GLY121 ASP122 ASP123 PRO124 TYR125 GLN126 ASN127 LYS128 GLY129 VAL130 ARG131 ALA132 ARG133 LEU134 TYR135 PRO136 ALA137 LEU138 PRO139 PRO140 LYS141 LYS142 HIS143 ILE144 CYS145 PHE146 TYR147 PRO148 MET149 SER150 LYS151 LYS152 ARG153 ASP154 GLY155 ALA156 ASP157 ASN158 TRP159 TYR160 MET161 LEU162 PRO163 MET164 GLU165 GLU166 ARG167 GLN168 GLN169 LEU170 ILE171 ARG172 ASP173 HIS174 GLY175 LEU176 ILE177 GLY178 ARG179 SER180 TYR181 ALA182 GLY183 LYS184 VAL185 GLN186 GLN187 ILE188 ILE189 GLY190 GLY191 SER192 ILE193 GLY194 PHE195 ASP196 ASP197 TYR198 GLU199 TRP200 GLY201 VAL202 THR203 LEU204 PHE205 SER206 ASP207 ASP208 ALA209 LEU210 GLU211 PHE212 LYS213 ARG214 ILE215 VAL216 THR217 GLU218 MET219 ARG220 PHE221 ASP222 GLU223 ALA224 SER225 ALA226 ARG227 TYR228 ALA229 GLU230 PHE231 GLY232 SER233 PHE234 PHE235 ILE236 GLY237 ASN238 LEU239 LEU240 LEU241 SER242 GLU243 GLN244 LEU245 SER246 LYS247 LEU248 PHE249 THR250 ILE251
Unit 2 LYS6 THR7 LEU8 ASP9 GLY10 TRP11 PHE12 CYS13 LEU14 HIS15 ASP16 PHE17 ARG18 SER19 ILE20 ASP21 TRP22 ALA23 ALA24 TRP25 ARG26 GLU27 LEU28 ASN29 PRO30 GLY31 ASN32 GLN33 GLU34 LEU35 MET36 LEU37 ASN38 GLU39 LEU40 SER41 HIS42 PHE43 LEU44 SER45 ASP46 MET47 GLU48 ILE49 THR50 LYS51 ASN52 ILE53 GLY54 GLU55 GLY56 GLU57 HIS58 THR59 ILE60 TYR61 SER62 ILE63 LEU64 GLY65 GLN66 LYS67 ALA68 ASP69 LEU70 VAL71 PHE72 PHE73 THR74 LEU75 ARG76 ASP77 SER78 LEU79 GLU80 ALA81 LEU82 ASN83 GLU84 VAL85 GLU86 ASN87 ARG88 PHE89 ASN90 LYS91 LEU92 ALA93 ILE94 ALA95 ASP96 TYR97 LEU98 LEU99 PRO100 THR101 TYR102 SER103 TYR104 ILE105 SER106 VAL107 VAL108 GLU109 LEU110 SER111 TYR125 GLN126 ASN127 LYS128 GLY129 VAL130 ARG131 ALA132 ARG133 LEU134 TYR135 PRO136 ALA137 LEU138 PRO139 PRO140 LYS141 LYS142 HIS143 ILE144 CYS145 PHE146 TYR147 PRO148 MET149 SER150 LYS151 LYS152 ARG153 ASP154 GLY155 ALA156 ASP157 ASN158 TRP159 TYR160 MET161 LEU162 PRO163 MET164 GLU165 GLU166 ARG167 GLN168 GLN169 LEU170 ILE171 ARG172 ASP173 HIS174 GLY175 LEU176 ILE177 GLY178 ARG179 SER180 TYR181 ALA182 GLY183 LYS184 VAL185 GLN186 GLN187 ILE188 ILE189 GLY190 GLY191 SER192 ILE193 GLY194 PHE195 ASP196 ASP197 TYR198 GLU199 TRP200 GLY201 VAL202 THR203 LEU204 PHE205 SER206 ASP207 ASP208 ALA209 LEU210 GLU211 PHE212 LYS213 ARG214 ILE215 VAL216 THR217 GLU218 MET219 ARG220 PHE221 ASP222 GLU223 ALA224 SER225 ALA226 ARG227 TYR228 ALA229 GLU230 PHE231 GLY232 SER233 PHE234 PHE235 ILE236 GLY237 ASN238 LEU239 LEU240 LEU241 SER242 GLU243 GLN244 LEU245 SER246 LYS247 LEU248 PHE249 THR250 ILE251
Unit 3 GLU3 ALA4 VAL5 LYS6 THR7 LEU8 ASP9 GLY10 TRP11 PHE12 CYS13 LEU14 HIS15 ASP16 PHE17 ARG18 SER19 ILE20 ASP21 TRP22 ALA23 ALA24 TRP25 ARG26 GLU27 LEU28 ASN29 PRO30 GLY31 ASN32 GLN33 GLU34 LEU35 MET36 LEU37 ASN38 GLU39 LEU40 SER41 HIS42 PHE43 LEU44 SER45 ASP46 MET47 GLU48 ILE49 THR50 LYS51 ASN52 ILE53 GLY54 GLU55 GLY56 GLU57 HIS58 THR59 ILE60 TYR61 SER62 ILE63 LEU64 GLY65 GLN66 LYS67 ALA68 ASP69 LEU70 VAL71 PHE72 PHE73 THR74 LEU75 ARG76 ASP77 SER78 LEU79 GLU80 ALA81 LEU82 ASN83 GLU84 VAL85 GLU86 ASN87 ARG88 PHE89 ASN90 LYS91 LEU92 ALA93 ILE94 ALA95 ASP96 TYR97 LEU98 LEU99 PRO100 THR101 TYR102 SER103 TYR104 ILE105 SER106 VAL107 VAL108 GLU109 LEU110 SER111 ASN112 TYR113 GLN126 ASN127 LYS128 GLY129 VAL130 ARG131 ALA132 ARG133 LEU134 TYR135 PRO136 ALA137 LEU138 PRO139 PRO140 LYS141 LYS142 HIS143 ILE144 CYS145 PHE146 TYR147 PRO148 MET149 SER150 LYS151 LYS152 ARG153 ASP154 GLY155 ALA156 ASP157 ASN158 TRP159 TYR160 MET161 LEU162 PRO163 MET164 GLU165 GLU166 ARG167 GLN168 GLN169 LEU170 ILE171 ARG172 ASP173 HIS174 GLY175 LEU176 ILE177 GLY178 ARG179 SER180 TYR181 ALA182 GLY183 LYS184 VAL185 GLN186 GLN187 ILE188 ILE189 GLY190 GLY191 SER192 ILE193 GLY194 PHE195 ASP196 ASP197 TYR198 GLU199 TRP200 GLY201 VAL202 THR203 LEU204 PHE205 SER206 ASP207 ASP208 ALA209 LEU210 GLU211 PHE212 LYS213 ARG214 ILE215 VAL216 THR217 GLU218 MET219 ARG220 PHE221 ASP222 GLU223 ALA224 SER225 ALA226 ARG227 TYR228 ALA229 GLU230 PHE231 GLY232 SER233 PHE234 PHE235 ILE236 GLY237 ASN238 LEU239 LEU240 LEU241 SER242 GLU243 GLN244 LEU245 SER246 LYS247 LEU248 PHE249 THR250 ILE251
Unit 4 ASN2 GLU3 ALA4 VAL5 LYS6 THR7 LEU8 ASP9 GLY10 TRP11 PHE12 CYS13 LEU14 HIS15 ASP16 PHE17 ARG18 SER19 ILE20 ASP21 TRP22 ALA23 ALA24 TRP25 ARG26 GLU27 LEU28 ASN29 PRO30 GLY31 ASN32 GLN33 GLU34 LEU35 MET36 LEU37 ASN38 GLU39 LEU40 SER41 HIS42 PHE43 LEU44 SER45 ASP46 MET47 GLU48 ILE49 THR50 LYS51 ASN52 ILE53 GLY54 GLU55 GLY56 GLU57 HIS58 THR59 ILE60 TYR61 SER62 ILE63 LEU64 GLY65 GLN66 LYS67 ALA68 ASP69 LEU70 VAL71 PHE72 PHE73 THR74 LEU75 ARG76 ASP77 SER78 LEU79 GLU80 ALA81 LEU82 ASN83 GLU84 VAL85 GLU86 ASN87 ARG88 PHE89 ASN90 LYS91 LEU92 ALA93 ILE94 ALA95 ASP96 TYR97 LEU98 LEU99 PRO100 THR101 TYR102 SER103 TYR104 ILE105 SER106 VAL107 VAL108 GLU109 LEU110 SER111 ASN112 TYR113 LEU114 ALA115 SER116 HIS117 MET118 ALA119 GLY120 GLY121 ASP122 ASP123 PRO124 TYR125 GLN126 ASN127 LYS128 GLY129 VAL130 ARG131 ALA132 ARG133 LEU134 TYR135 PRO136 ALA137 LEU138 PRO139 PRO140 LYS141 LYS142 HIS143 ILE144 CYS145 PHE146 TYR147 PRO148 MET149 SER150 LYS151 LYS152 ARG153 ASP154 GLY155 ALA156 ASP157 ASN158 TRP159 TYR160 MET161 LEU162 PRO163 MET164 GLU165 GLU166 ARG167 GLN168 GLN169 LEU170 ILE171 ARG172 ASP173 HIS174 GLY175 LEU176 ILE177 GLY178 ARG179 SER180 TYR181 ALA182 GLY183 LYS184 VAL185 GLN186 GLN187 ILE188 ILE189 GLY190 GLY191 SER192 ILE193 GLY194 PHE195 ASP196 ASP197 TYR198 GLU199 TRP200 GLY201 VAL202 THR203 LEU204 PHE205 SER206 ASP207 ASP208 ALA209 LEU210 GLU211 PHE212 LYS213 ARG214 ILE215 VAL216 THR217 GLU218 MET219 ARG220 PHE221 ASP222 GLU223 ALA224 SER225 ALA226 ARG227 TYR228 ALA229 GLU230 PHE231 GLY232 SER233 PHE234 PHE235 ILE236 GLY237 ASN238 LEU239 LEU240 LEU241 SER242 GLU243 GLN244 LEU245 SER246 LYS247 LEU248 PHE249 THR250 ILE251
Unit 5 LYS6 THR7 LEU8 ASP9 GLY10 TRP11 PHE12 CYS13 LEU14 HIS15 ASP16 PHE17 ARG18 SER19 ILE20 ASP21 TRP22 ALA23 ALA24 TRP25 ARG26 GLU27 LEU28 ASN29 PRO30 GLY31 ASN32 GLN33 GLU34 LEU35 MET36 LEU37 ASN38 GLU39 LEU40 SER41 HIS42 PHE43 LEU44 SER45 ASP46 MET47 GLU48 ILE49 THR50 LYS51 ASN52 ILE53 GLY54 GLU55 GLY56 GLU57 HIS58 THR59 ILE60 TYR61 SER62 ILE63 LEU64 GLY65 GLN66 LYS67 ALA68 ASP69 LEU70 VAL71 PHE72 PHE73 THR74 LEU75 ARG76 ASP77 SER78 LEU79 GLU80 ALA81 LEU82 ASN83 GLU84 VAL85 GLU86 ASN87 ARG88 PHE89 ASN90 LYS91 LEU92 ALA93 ILE94 ALA95 ASP96 TYR97 LEU98 LEU99 PRO100 THR101 TYR102 SER103 TYR104 ILE105 SER106 VAL107 VAL108 GLU109 LEU110 SER111 ASN112 TYR113 TYR125 GLN126 ASN127 LYS128 GLY129 VAL130 ARG131 ALA132 ARG133 LEU134 TYR135 PRO136 ALA137 LEU138 PRO139 PRO140 LYS141 LYS142 HIS143 ILE144 CYS145 PHE146 TYR147 PRO148 MET149 SER150 LYS151 LYS152 ARG153 ASP154 GLY155 ALA156 ASP157 ASN158 TRP159 TYR160 MET161 LEU162 PRO163 MET164 GLU165 GLU166 ARG167 GLN168 GLN169 LEU170 ILE171 ARG172 ASP173 HIS174 GLY175 LEU176 ILE177 GLY178 ARG179 SER180 TYR181 ALA182 GLY183 LYS184 VAL185 GLN186 GLN187 ILE188 ILE189 GLY190 GLY191 SER192 ILE193 GLY194 PHE195 ASP196 ASP197 TYR198 GLU199 TRP200 GLY201 VAL202 THR203 LEU204 PHE205 SER206 ASP207 ASP208 ALA209 LEU210 GLU211 PHE212 LYS213 ARG214 ILE215 VAL216 THR217 GLU218 MET219 ARG220 PHE221 ASP222 GLU223 ALA224 SER225 ALA226 ARG227 TYR228 ALA229 GLU230 PHE231 GLY232 SER233 PHE234 PHE235 ILE236 GLY237 ASN238 LEU239 LEU240 LEU241 SER242 GLU243 GLN244 LEU245 SER246 LYS247 LEU248 PHE249 THR250 ILE251
Ligands
Unit 6 NA301 FEC302 MPD303
Unit 7 NA301 FEC302 MPD303
Unit 8 NA301 FEC302
Unit 9 NA301 FEC302 MPD303
Unit 10 NA301 FEC302 MPD303
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany