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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE LAMBDA N-NUS FACTOR COMPLEX
Keywords TRANSCRIPTION REGULATION ANTITERMINATION NUS PROTEINS PHAGE PROTEIN, TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5LM7     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 428 3345 0
2  Protein   N UTILIZATION SUBSTANCE PROTEIN B HOMOLOG  B 134 1063 0
3  Protein   30S RIBOSOMAL PROTEIN S10  J 96 771 0
4  Protein   ANTITERMINATION PROTEIN N  N 85 693 0
5  RNA    R 29 616 0
6  Protein    C 423 3308 0
7  Protein   N UTILIZATION SUBSTANCE PROTEIN B HOMOLOG  D 132 1050 0
8  Protein   30S RIBOSOMAL PROTEIN S10  E 91 733 0
9  Protein   ANTITERMINATION PROTEIN N  F 84 679 0
10  RNA    G 27 576 0
total       1529 12834 0
Proteins
Unit 1 GLY-1 ALA0 MET1 ASN2 LYS3 GLU4 ILE5 LEU6 ALA7 VAL8 VAL9 GLU10 ALA11 VAL12 SER13 ASN14 GLU15 LYS16 ALA17 LEU18 PRO19 ARG20 GLU21 LYS22 ILE23 PHE24 GLU25 ALA26 LEU27 GLU28 SER29 ALA30 LEU31 ALA32 THR33 ALA34 THR35 LYS36 LYS37 LYS38 TYR39 GLU40 GLN41 GLU42 ILE43 ASP44 VAL45 ARG46 VAL47 GLN48 ILE49 ASP50 ARG51 LYS52 SER53 GLY54 ASP55 PHE56 ASP57 THR58 PHE59 ARG60 ARG61 TRP62 LEU63 VAL64 VAL65 ASP66 GLU67 VAL68 THR69 GLN70 PRO71 THR72 LYS73 GLU74 ILE75 THR76 LEU77 GLU78 ALA79 ALA80 ARG81 TYR82 GLU83 ASP84 GLU85 SER86 LEU87 ASN88 LEU89 GLY90 ASP91 TYR92 VAL93 GLU94 ASP95 GLN96 ILE97 GLU98 SER99 VAL100 THR101 PHE102 ASP103 ARG104 ILE105 THR106 THR107 GLN108 THR109 ALA110 LYS111 GLN112 VAL113 ILE114 VAL115 GLN116 LYS117 VAL118 ARG119 GLU120 ALA121 GLU122 ARG123 ALA124 MET125 VAL126 VAL127 ASP128 GLN129 PHE130 ARG131 GLU132 HIS133 GLU134 GLY135 GLU136 ILE137 ILE138 THR139 GLY140 VAL141 VAL142 LYS143 LYS144 VAL145 ASN146 ARG147 ASP148 ASN149 ILE150 SER151 LEU152 ASP153 LEU154 GLY155 ASN156 ASN157 ALA158 GLU159 ALA160 VAL161 ILE162 LEU163 ARG164 GLU165 ASP166 MET167 LEU168 PRO169 ARG170 GLU171 ASN172 PHE173 ARG174 PRO175 GLY176 ASP177 ARG178 VAL179 ARG180 GLY181 VAL182 LEU183 TYR184 SER185 VAL186 ARG187 PRO188 GLU189 ALA190 ARG191 GLY192 ALA193 GLN194 LEU195 PHE196 VAL197 THR198 ARG199 SER200 LYS201 PRO202 GLU203 MET204 LEU205 ILE206 GLU207 LEU208 PHE209 ARG210 ILE211 GLU212 VAL213 PRO214 GLU215 ILE216 GLY217 GLU218 GLU219 VAL220 ILE221 GLU222 ILE223 LYS224 ALA225 ALA226 ALA227 ARG228 ASP229 PRO230 GLY231 SER232 ARG233 ALA234 LYS235 ILE236 ALA237 VAL238 LYS239 THR240 ASN241 ASP242 LYS243 ARG244 ILE245 ASP246 PRO247 VAL248 GLY249 ALA250 CYS251 VAL252 GLY253 MET254 ARG255 GLY256 ALA257 ARG258 VAL259 GLN260 ALA261 VAL262 SER263 THR264 GLU265 LEU266 GLY267 GLY268 GLU269 ARG270 ILE271 ASP272 ILE273 VAL274 LEU275 TRP276 ASP277 ASP278 ASN279 PRO280 ALA281 GLN282 PHE283 VAL284 ILE285 ASN286 ALA287 MET288 ALA289 PRO290 ALA291 ASP292 VAL293 ALA294 SER295 ILE296 VAL297 VAL298 ASP299 GLU300 ASP301 LYS302 HIS303 THR304 MET305 ASP306 ILE307 ALA308 VAL309 GLU310 ALA311 GLY312 ASN313 LEU314 ALA315 GLN316 ALA317 ILE318 GLY319 ARG320 ASN321 GLY322 GLN323 ASN324 VAL325 ARG326 LEU327 ALA328 SER329 GLN330 LEU331 SER332 GLY333 TRP334 GLU335 LEU336 ASN337 VAL338 MET339 THR340 VAL341 ASP342 ASP343 LEU344 GLN345 ALA346 LYS347 HIS348 GLN349 ALA350 GLU351 ALA352 HIS353 ALA354 ALA355 ILE356 ASP357 THR358 PHE359 THR360 LYS361 TYR362 LEU363 ASP364 ILE365 ASP366 GLU367 ASP368 PHE369 ALA370 THR371 VAL372 LEU373 VAL374 GLU375 GLU376 GLY377 PHE378 SER379 THR380 LEU381 GLU382 GLU383 LEU384 ALA385 TYR386 VAL387 PRO388 MET389 LYS390 GLU391 LEU392 LEU393 GLU394 ILE395 GLU396 GLY397 LEU398 ASP399 GLU400 PRO401 THR402 VAL403 GLU404 ALA405 LEU406 ARG407 GLU408 ARG409 ALA410 LYS411 ASN412 ALA413 LEU414 ALA415 THR416 ILE417 ALA418 GLN419 ALA420 GLN421 GLU422 GLU423 SER424 LEU425 GLY426
Unit 2 ALA4 ALA5 ARG6 ARG7 ARG8 ALA9 ARG10 GLU11 CYS12 ALA13 VAL14 GLN15 ALA16 LEU17 TYR18 SER19 TRP20 GLN21 LEU22 SER23 GLN24 ASN25 ASP26 ILE27 ALA28 ASP29 VAL30 GLU31 TYR32 GLN33 PHE34 LEU35 ALA36 GLU37 GLN38 ASP39 VAL40 LYS41 ASP42 VAL43 ASP44 VAL45 LEU46 TYR47 PHE48 ARG49 GLU50 LEU51 LEU52 ALA53 GLY54 VAL55 ALA56 THR57 ASN58 THR59 ALA60 TYR61 LEU62 ASP63 GLY64 LEU65 MET66 LYS67 PRO68 TYR69 LEU70 SER71 ARG72 LEU73 LEU74 GLU75 GLU76 LEU77 GLY78 GLN79 VAL80 GLU81 LYS82 ALA83 VAL84 LEU85 ARG86 ILE87 ALA88 LEU89 TYR90 GLU91 LEU92 SER93 LYS94 ARG95 SER96 ASP97 VAL98 PRO99 TYR100 LYS101 VAL102 ALA103 ILE104 ASN105 GLU106 ALA107 ILE108 GLU109 LEU110 ALA111 LYS112 SER113 PHE114 GLY115 ALA116 GLU117 ASP118 SER119 HIS120 LYS121 PHE122 VAL123 ASN124 GLY125 VAL126 LEU127 ASP128 LYS129 ALA130 ALA131 PRO132 VAL133 ILE134 ARG135 PRO136 ASN137
Unit 3 GLN2 ASN3 GLN4 ARG5 ILE6 ARG7 ILE8 ARG9 LEU10 LYS11 ALA12 PHE13 ASP14 HIS15 ARG16 LEU17 ILE18 ASP19 GLN20 ALA21 THR22 ALA23 GLU24 ILE25 VAL26 GLU27 THR28 ALA29 LYS30 ARG31 THR32 GLY33 ALA34 GLN35 VAL36 ARG37 GLY38 PRO39 ILE40 PRO41 LEU42 PRO43 THR44 ARG45 LYS46 GLU47 ARG48 PHE49 THR50 VAL51 LEU52 ILE53 SER54 PRO55 HIS56 VAL57 ASN58 ASP63 GLN64 TYR65 GLU66 ILE67 ARG68 THR69 HIS70 LEU71 ARG72 LEU73 VAL74 ASP75 ILE76 VAL77 GLU78 PRO79 THR80 GLU81 LYS82 THR83 VAL84 ASP85 ALA86 LEU87 MET88 ARG89 LEU90 ASP91 LEU92 ALA93 ALA94 GLY95 VAL96 ASP97 VAL98 GLN99 ILE100 SER101
Unit 4 LEU-2 GLY-1 SER0 MET1 ASP2 ALA3 GLN4 THR5 ARG6 ARG7 ARG8 GLU9 ARG10 ARG11 ALA12 GLU13 LYS14 GLN15 ALA16 GLN17 TRP18 LYS19 ALA20 ALA21 ASN22 PRO23 LEU24 LEU25 VAL26 GLY27 VAL28 SER29 ALA30 LYS31 PRO32 VAL33 ASN34 ARG35 PRO36 ILE37 LEU38 SER39 LEU40 ASN41 ARG42 LYS43 PRO44 LYS45 SER46 ARG47 VAL48 GLU49 SER50 ALA51 LEU52 ASN53 PRO54 ILE55 ASP56 LEU57 THR58 VAL59 LEU60 ALA61 GLU62 TYR63 HIS64 LYS65 GLN66 ILE67 GLU68 SER69 ASN70 LEU71 GLN72 ARG73 ILE74 GLU75 ARG76 LYS77 ASN78 GLN79 ARG80 THR81 TRP82
Unit 6 GLY-1 ALA0 MET1 ASN2 LYS3 GLU4 ILE5 LEU6 ALA7 VAL8 VAL9 GLU10 ALA11 VAL12 SER13 ASN14 GLU15 LYS16 ALA17 LEU18 PRO19 ARG20 GLU21 LYS22 ILE23 PHE24 GLU25 ALA26 LEU27 GLU28 SER29 ALA30 LEU31 ALA32 THR33 ALA34 THR35 LYS36 LYS37 LYS38 TYR39 GLU40 GLN41 GLU42 ILE43 ASP44 VAL45 ARG46 VAL47 GLN48 ILE49 ASP50 ARG51 LYS52 SER53 GLY54 ASP55 PHE56 ASP57 THR58 PHE59 ARG60 ARG61 TRP62 LEU63 VAL64 VAL65 ASP66 GLU67 VAL68 THR69 GLN70 PRO71 THR72 LYS73 GLU74 ILE75 THR76 LEU77 GLU78 ALA79 ALA80 ARG81 TYR82 GLU83 ASP84 GLU85 SER86 LEU87 ASN88 LEU89 GLY90 ASP91 TYR92 VAL93 GLU94 ASP95 GLN96 ILE97 GLU98 SER99 VAL100 THR101 PHE102 ASP103 ARG104 ILE105 THR106 THR107 GLN108 THR109 ALA110 LYS111 GLN112 VAL113 ILE114 VAL115 GLN116 LYS117 VAL118 ARG119 GLU120 ALA121 GLU122 ARG123 ALA124 MET125 VAL126 VAL127 ASP128 GLN129 PHE130 ARG131 GLU132 HIS133 GLU134 GLY135 GLU136 ILE137 ILE138 THR139 GLY140 VAL141 VAL142 LYS143 LYS144 VAL145 ASN146 ARG147 ASP148 ASN149 ILE150 SER151 LEU152 ASP153 LEU154 GLY155 ASN156 ASN157 ALA158 GLU159 ALA160 VAL161 ILE162 LEU163 ARG164 GLU165 ASP166 MET167 LEU168 PRO169 ARG170 GLU171 ASN172 PHE173 ARG174 PRO175 GLY176 ASP177 ARG178 VAL179 ARG180 GLY181 VAL182 LEU183 TYR184 SER185 VAL186 ARG187 PRO188 GLU189 ALA190 ARG191 GLY192 ALA193 GLN194 LEU195 PHE196 VAL197 THR198 ARG199 SER200 LYS201 PRO202 GLU203 MET204 LEU205 ILE206 GLU207 LEU208 PHE209 ARG210 ILE211 GLU212 VAL213 PRO214 GLU215 ILE216 GLY217 GLU218 GLU219 VAL220 ILE221 GLU222 ILE223 LYS224 ALA225 ALA226 ALA227 ARG228 ASP229 PRO230 GLY231 SER232 ARG233 ALA234 LYS235 ILE236 ALA237 VAL238 LYS239 THR240 ASN241 ASP242 LYS243 ARG244 ILE245 ASP246 PRO247 VAL248 GLY249 ALA250 CYS251 VAL252 GLY253 MET254 ARG255 GLY256 ALA257 ARG258 VAL259 GLN260 ALA261 VAL262 SER263 THR264 GLU265 LEU266 GLY267 GLY268 GLU269 ARG270 ILE271 ASP272 ILE273 VAL274 LEU275 TRP276 ASP277 ASP278 ASN279 PRO280 ALA281 GLN282 PHE283 VAL284 ILE285 ASN286 ALA287 MET288 ALA289 PRO290 ALA291 ASP292 VAL293 ALA294 SER295 ILE296 VAL297 VAL298 ASP299 GLU300 ASP301 LYS302 HIS303 THR304 MET305 ASP306 ILE307 ALA308 VAL309 GLU310 ALA311 GLY312 ASN313 LEU314 ALA315 GLN316 ALA317 ILE318 GLY319 ARG320 ASN321 GLY322 GLN323 ASN324 VAL325 ARG326 LEU327 ALA328 SER329 GLN330 LEU331 SER332 GLY333 TRP334 GLU335 LEU336 ASN337 VAL338 MET339 THR340 VAL341 ASP342 ASP343 LEU344 GLN345 ALA346 LYS347 HIS348 GLN349 ALA350 GLU351 ALA352 HIS353 ALA354 ALA355 ILE356 ASP357 THR358 PHE359 THR360 LYS361 TYR362 LEU363 ASP364 ILE365 ASP366 GLU367 ASP368 PHE369 ALA370 THR371 VAL372 LEU373 VAL374 GLU375 GLU376 GLY377 PHE378 SER379 THR380 LEU381 GLU382 GLU383 LEU384 ALA385 TYR386 VAL387 PRO388 MET389 LYS390 GLU391 LEU392 LEU393 GLU394 ILE395 GLU396 GLY397 LEU398 ASP399 GLU400 PRO401 THR402 VAL403 GLU404 ALA405 LEU406 ARG407 GLU408 ARG409 ALA410 LYS411 ASN412 ALA413 LEU414 ALA415 THR416 ILE417 ALA418 GLN419 ALA420 GLN421
Unit 7 ALA5 ARG6 ARG7 ARG8 ALA9 ARG10 GLU11 CYS12 ALA13 VAL14 GLN15 ALA16 LEU17 TYR18 SER19 TRP20 GLN21 LEU22 SER23 GLN24 ASN25 ASP26 ILE27 ALA28 ASP29 VAL30 GLU31 TYR32 GLN33 PHE34 LEU35 ALA36 GLU37 GLN38 ASP39 VAL40 LYS41 ASP42 VAL43 ASP44 VAL45 LEU46 TYR47 PHE48 ARG49 GLU50 LEU51 LEU52 ALA53 GLY54 VAL55 ALA56 THR57 ASN58 THR59 ALA60 TYR61 LEU62 ASP63 GLY64 LEU65 MET66 LYS67 PRO68 TYR69 LEU70 SER71 ARG72 LEU73 LEU74 GLU75 GLU76 LEU77 GLY78 GLN79 VAL80 GLU81 LYS82 ALA83 VAL84 LEU85 ARG86 ILE87 ALA88 LEU89 TYR90 GLU91 LEU92 SER93 LYS94 ARG95 SER96 ASP97 VAL98 PRO99 TYR100 LYS101 VAL102 ALA103 ILE104 ASN105 GLU106 ALA107 ILE108 GLU109 LEU110 ALA111 LYS112 SER113 PHE114 GLY115 ALA116 GLU117 ASP118 SER119 HIS120 LYS121 PHE122 VAL123 ASN124 GLY125 VAL126 LEU127 ASP128 LYS129 ALA130 ALA131 PRO132 VAL133 ILE134 ARG135 PRO136
Unit 8 GLN2 ASN3 GLN4 ARG5 ILE6 ARG7 ILE8 ARG9 LEU10 LYS11 ALA12 PHE13 ASP14 HIS15 ARG16 LEU17 ILE18 ASP19 GLN20 ALA21 THR22 ALA23 GLU24 ILE25 VAL26 GLU27 THR28 ALA29 LYS30 ARG31 THR32 GLY33 ALA34 GLN35 VAL36 ARG37 GLY38 PRO39 ILE40 PRO41 LEU42 PRO43 THR44 ARG45 LYS46 GLU47 ARG48 PHE49 THR50 VAL51 LEU52 ILE53 ASP63 GLN64 TYR65 GLU66 ILE67 ARG68 THR69 HIS70 LEU71 ARG72 LEU73 VAL74 ASP75 ILE76 VAL77 GLU78 PRO79 THR80 GLU81 LYS82 THR83 VAL84 ASP85 ALA86 LEU87 MET88 ARG89 LEU90 ASP91 LEU92 ALA93 ALA94 GLY95 VAL96 ASP97 VAL98 GLN99 ILE100 SER101
Unit 9 LEU-2 GLY-1 SER0 MET1 ASP2 ALA3 GLN4 THR5 ARG6 ARG7 ARG8 GLU9 ARG10 ARG11 ALA12 GLU13 LYS14 GLN15 ALA16 GLN17 TRP18 LYS19 ALA20 ALA21 ASN22 PRO23 LEU24 LEU25 VAL26 GLY27 VAL28 SER29 ALA30 LYS31 PRO32 VAL33 ASN34 ARG35 PRO36 ILE37 LEU38 SER39 LEU40 ASN41 ARG42 LYS43 PRO44 LYS45 SER46 ARG47 VAL48 GLU49 SER50 ALA51 LEU52 ASN53 PRO54 ILE55 ASP56 LEU57 THR58 VAL59 LEU60 ALA61 GLU62 TYR63 HIS64 LYS65 GLN66 ILE67 GLU68 SER69 ASN70 LEU71 GLN72 ARG73 ILE74 GLU75 ARG76 LYS77 ASN78 GLN79 ARG80 THR81
Nucleic acids
Unit 5 C3 U4 C5 U6 U7 U8 A9 A10 C11 A12 U13 U14 A15 A16 G17 C18 C19 C20 U21 G22 A23 A24 G25 A26 A27 G28 G29 G30 C31
Unit 10 C5 U6 U7 U8 A9 A10 C11 A12 U13 U14 A15 A16 G17 C18 C19 C20 U21 G22 A23 A24 G25 A26 A27 G28 G29 G30 C31
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany