5LBS - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURAL BASIS OF ZIKA AND DENGUE VIRUS POTENT ANTIBODY CR NEUTRALIZATION
• Keywords: IMMUNE SYSTEM-VIRAL PROTEIN COMPLEX, ZIKA VIRUS, BROADLY NEU ANTIBODY, IMMUNE SYSTEM-VIRAL PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5LBS	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ENVELOPE PROTEIN E	A	394	3009	0
2	Protein	ENVELOPE PROTEIN E	B	386	2968	0
3	Protein	BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8	H	121	932	0
4	Protein	BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8	I	122	938	0
5	Protein	BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8	L	111	861	0
6	Protein	BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8	M	112	864	0
7	Ligand	ENVELOPE PROTEIN E	A	4	0	17
8	Ligand	ENVELOPE PROTEIN E	B	1	0	5
9	Ligand	BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8	H	2	0	8
10	Ligand	BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8	I	2	0	9
11	Ligand	BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8	L	3	0	12
12	Ligand	BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8	M	2	0	8
13	Water			180	0	180
total				1440	9572	239

Proteins

Unit 1	ILE 1 ARG 2 CYS 3 ILE 4 GLY 5 VAL 6 SER 7 ASN 8 ARG 9 ASP 10 PHE 11 VAL 12 GLU 13 GLY 14 MET 15 SER 16 GLY 17 GLY 18 THR 19 TRP 20 VAL 21 ASP 22 VAL 23 VAL 24 LEU 25 GLU 26 HIS 27 GLY 28 GLY 29 CYS 30 VAL 31 THR 32 VAL 33 MET 34 ALA 35 GLN 36 ASP 37 LYS 38 PRO 39 THR 40 VAL 41 ASP 42 ILE 43 GLU 44 LEU 45 VAL 46 THR 47 THR 48 THR 49 VAL 50 SER 51 ASN 52 MET 53 ALA 54 GLU 55 VAL 56 ARG 57 SER 58 TYR 59 CYS 60 TYR 61 GLU 62 ALA 63 SER 64 ILE 65 SER 66 ASP 67 MET 68 ALA 69 SER 70 ASP 71 SER 72 ARG 73 CYS 74 PRO 75 THR 76 GLN 77 GLY 78 GLU 79 ALA 80 TYR 81 LEU 82 ASP 83 LYS 84 GLN 85 SER 86 ASP 87 THR 88 GLN 89 TYR 90 VAL 91 CYS 92 LYS 93 ARG 94 THR 95 LEU 96 VAL 97 ASP 98 ARG 99 GLY 100 TRP 101 GLY 102 ASN 103 GLY 104 CYS 105 GLY 106 LEU 107 PHE 108 GLY 109 LYS 110 GLY 111 SER 112 LEU 113 VAL 114 THR 115 CYS 116 ALA 117 LYS 118 PHE 119 ALA 120 CYS 121 SER 122 LYS 123 LYS 124 MET 125 THR 126 GLY 127 LYS 128 SER 129 ILE 130 GLN 131 PRO 132 GLU 133 ASN 134 LEU 135 GLU 136 TYR 137 ARG 138 ILE 139 MET 140 LEU 141 SER 142 VAL 143 HIS 144 GLY 145 SER 146 GLN 147 HIS 148 ASP 161 GLU 162 ASN 163 ARG 164 ALA 165 LYS 166 VAL 167 GLU 168 ILE 169 THR 170 PRO 171 ASN 172 SER 173 PRO 174 ARG 175 ALA 176 GLU 177 ALA 178 THR 179 LEU 180 GLY 181 GLY 182 PHE 183 GLY 184 SER 185 LEU 186 GLY 187 LEU 188 ASP 189 CYS 190 GLU 191 PRO 192 PHE 198 SER 199 ASP 200 LEU 201 TYR 202 TYR 203 LEU 204 THR 205 MET 206 ASN 207 ASN 208 LYS 209 HIS 210 TRP 211 LEU 212 VAL 213 HIS 214 LYS 215 GLU 216 TRP 217 PHE 218 HIS 219 ASP 220 ILE 221 PRO 222 LEU 223 PRO 224 TRP 225 HIS 226 ALA 227 GLY 228 ALA 229 ASP 230 THR 233 PRO 234 HIS 235 TRP 236 ASN 237 ASN 238 LYS 239 GLU 240 ALA 241 LEU 242 VAL 243 GLU 244 PHE 245 LYS 246 ASP 247 ALA 248 HIS 249 ALA 250 LYS 251 ARG 252 GLN 253 THR 254 VAL 255 VAL 256 VAL 257 LEU 258 GLY 259 SER 260 GLN 261 GLU 262 GLY 263 ALA 264 VAL 265 HIS 266 THR 267 ALA 268 LEU 269 ALA 270 GLY 271 ALA 272 LEU 273 GLU 274 ALA 275 GLU 276 MET 277 ASP 278 GLY 279 ALA 280 LYS 281 GLY 282 ARG 283 LEU 284 SER 285 SER 286 GLY 287 HIS 288 LEU 289 LYS 290 CYS 291 ARG 292 LEU 293 LYS 294 MET 295 ASP 296 LYS 297 LEU 298 ARG 299 LEU 300 LYS 301 GLY 302 VAL 303 SER 304 TYR 305 SER 306 LEU 307 CYS 308 THR 309 ALA 310 ALA 311 PHE 312 THR 313 PHE 314 THR 315 LYS 316 ILE 317 PRO 318 ALA 319 GLU 320 THR 321 LEU 322 HIS 323 GLY 324 THR 325 VAL 326 THR 327 VAL 328 GLU 329 VAL 330 GLN 331 TYR 332 ALA 333 GLY 334 THR 335 ASP 336 GLY 337 PRO 338 CYS 339 LYS 340 VAL 341 PRO 342 ALA 343 GLN 344 MET 345 ALA 346 VAL 347 ASP 348 MET 349 GLN 350 THR 351 LEU 352 THR 353 PRO 354 VAL 355 GLY 356 ARG 357 LEU 358 ILE 359 THR 360 ALA 361 ASN 362 PRO 363 VAL 364 ILE 365 THR 366 GLU 367 SER 368 THR 369 GLU 370 ASN 371 SER 372 LYS 373 MET 374 MET 375 LEU 376 GLU 377 LEU 378 ASP 379 PRO 380 PRO 381 PHE 382 GLY 383 ASP 384 SER 385 TYR 386 ILE 387 VAL 388 ILE 389 GLY 390 VAL 391 GLY 392 GLU 393 LYS 394 LYS 395 ILE 396 THR 397 HIS 398 HIS 399 TRP 400 HIS 401 ARG 402 SER 403 GLY 437 GLY 438 SER 439 TRP 440 SER 441 HIS 442 PRO 443 GLN 444 PHE 445 GLU 446
Unit 2	ILE 1 ARG 2 CYS 3 ILE 4 GLY 5 VAL 6 SER 7 ASN 8 ARG 9 ASP 10 PHE 11 VAL 12 GLU 13 GLY 14 GLY 18 THR 19 TRP 20 VAL 21 ASP 22 VAL 23 VAL 24 LEU 25 GLU 26 HIS 27 GLY 28 GLY 29 CYS 30 VAL 31 THR 32 VAL 33 MET 34 ALA 35 GLN 36 ASP 37 LYS 38 PRO 39 THR 40 VAL 41 ASP 42 ILE 43 GLU 44 LEU 45 VAL 46 THR 47 THR 48 THR 49 VAL 50 SER 51 ASN 52 MET 53 ALA 54 GLU 55 VAL 56 ARG 57 SER 58 TYR 59 CYS 60 TYR 61 GLU 62 ALA 63 SER 64 ILE 65 SER 66 ASP 67 MET 68 ALA 69 SER 70 ASP 71 SER 72 ARG 73 CYS 74 PRO 75 THR 76 GLN 77 GLY 78 GLU 79 ALA 80 TYR 81 LEU 82 ASP 83 LYS 84 GLN 85 SER 86 ASP 87 THR 88 GLN 89 TYR 90 VAL 91 CYS 92 LYS 93 ARG 94 THR 95 LEU 96 VAL 97 ASP 98 ARG 99 GLY 100 TRP 101 GLY 102 ASN 103 GLY 104 CYS 105 GLY 106 LEU 107 PHE 108 GLY 109 LYS 110 GLY 111 SER 112 LEU 113 VAL 114 THR 115 CYS 116 ALA 117 LYS 118 PHE 119 ALA 120 CYS 121 SER 122 LYS 123 LYS 124 MET 125 THR 126 GLY 127 LYS 128 SER 129 ILE 130 GLN 131 PRO 132 GLU 133 ASN 134 LEU 135 GLU 136 TYR 137 ARG 138 ILE 139 MET 140 LEU 141 SER 142 VAL 143 HIS 144 GLY 145 SER 146 GLN 147 GLU 162 ASN 163 ARG 164 ALA 165 LYS 166 VAL 167 GLU 168 ILE 169 THR 170 PRO 171 ASN 172 SER 173 PRO 174 ARG 175 ALA 176 GLU 177 ALA 178 THR 179 LEU 180 GLY 181 GLY 182 PHE 183 GLY 184 SER 185 LEU 186 GLY 187 LEU 188 ASP 189 CYS 190 GLU 191 PRO 192 ARG 193 THR 194 GLY 195 LEU 196 ASP 197 PHE 198 SER 199 ASP 200 LEU 201 TYR 202 TYR 203 LEU 204 THR 205 MET 206 ASN 207 ASN 208 LYS 209 HIS 210 TRP 211 LEU 212 VAL 213 HIS 214 LYS 215 GLU 216 TRP 217 PHE 218 HIS 219 ASP 220 ILE 221 PRO 222 LEU 223 PRO 224 TRP 225 HIS 226 PRO 234 HIS 235 TRP 236 ASN 237 ASN 238 LYS 239 GLU 240 ALA 241 LEU 242 VAL 243 GLU 244 PHE 245 LYS 246 ASP 247 ALA 248 HIS 249 ALA 250 LYS 251 ARG 252 GLN 253 THR 254 VAL 255 VAL 256 VAL 257 LEU 258 GLY 259 SER 260 GLN 261 GLU 262 GLY 263 ALA 264 VAL 265 HIS 266 THR 267 ALA 268 LEU 269 ALA 270 GLY 271 ALA 272 LEU 273 GLU 274 ALA 275 GLU 276 MET 277 ASP 278 GLY 279 ALA 280 LYS 281 GLY 282 ARG 283 LEU 284 SER 285 SER 286 GLY 287 HIS 288 LEU 289 LYS 290 CYS 291 ARG 292 LEU 293 LYS 294 MET 295 ASP 296 LYS 297 LEU 298 ARG 299 LEU 300 LYS 301 GLY 302 VAL 303 SER 304 TYR 305 SER 306 LEU 307 CYS 308 THR 309 ALA 310 ALA 311 PHE 312 THR 313 PHE 314 THR 315 LYS 316 ILE 317 PRO 318 ALA 319 GLU 320 THR 321 LEU 322 HIS 323 GLY 324 THR 325 VAL 326 THR 327 VAL 328 GLU 329 VAL 330 GLN 331 TYR 332 ALA 333 GLY 334 THR 335 ASP 336 GLY 337 PRO 338 CYS 339 LYS 340 VAL 341 PRO 342 ALA 343 GLN 344 MET 345 ALA 346 VAL 347 ASP 348 MET 349 GLN 350 THR 351 LEU 352 THR 353 PRO 354 VAL 355 GLY 356 ARG 357 LEU 358 ILE 359 THR 360 ALA 361 ASN 362 PRO 363 VAL 364 ILE 365 THR 366 GLU 367 SER 368 THR 369 GLU 370 ASN 371 SER 372 LYS 373 MET 374 MET 375 LEU 376 GLU 377 LEU 378 ASP 379 PRO 380 PRO 381 PHE 382 GLY 383 ASP 384 SER 385 TYR 386 ILE 387 VAL 388 ILE 389 GLY 390 VAL 391 GLY 392 GLU 393 LYS 394 LYS 395 ILE 396 THR 397 HIS 398 HIS 399 TRP 400 HIS 401 ARG 402 SER 403 GLY 437 GLY 438 SER 439 TRP 440 SER 441 HIS 442 PRO 443
Unit 3	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 SER 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 THR 31 TYR 32 SER 33 MET 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TYR 47 VAL 48 SER 49 ALA 50 ILE 51 THR 52 GLY 52A GLU 53 GLY 54 ASP 55 SER 56 ALA 57 PHE 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 SER 74 LYS 75 ASN 76 THR 77 LEU 78 TYR 79 PHE 80 GLU 81 MET 82 ASN 82A SER 82B LEU 82C ARG 83 PRO 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 VAL 93 GLY 94 GLY 95 TYR 96 SER 97 ASN 98 PHE 99 TYR 100 TYR 100A TYR 100B TYR 100C THR 100D MET 100E ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 THR 108 VAL 109 THR 110 VAL 111 SER 112
Unit 4	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 SER 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 THR 31 TYR 32 SER 33 MET 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TYR 47 VAL 48 SER 49 ALA 50 ILE 51 THR 52 GLY 52A GLU 53 GLY 54 ASP 55 SER 56 ALA 57 PHE 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 SER 74 LYS 75 ASN 76 THR 77 LEU 78 TYR 79 PHE 80 GLU 81 MET 82 ASN 82A SER 82B LEU 82C ARG 83 PRO 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 VAL 93 GLY 94 GLY 95 TYR 96 SER 97 ASN 98 PHE 99 TYR 100 TYR 100A TYR 100B TYR 100C THR 100D MET 100E ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 THR 108 VAL 109 THR 110 VAL 111 SER 112 SER 113
Unit 5	GLU 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 THR 10 LEU 11 SER 12 LEU 13 SER 14 PRO 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 LEU 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 ILE 29 SER 30 THR 31 PHE 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 HIS 38 LYS 39 PRO 40 GLY 41 GLN 42 ALA 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 THR 53 ARG 54 ALA 55 THR 56 GLY 57 VAL 58 PRO 59 ALA 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 ARG 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 THR 77 LEU 78 GLU 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 ARG 91 TYR 92 ASN 93 TRP 94 PRO 95 PRO 95A TYR 96 THR 97 PHE 98 GLY 99 GLN 100 GLY 101 THR 102 LYS 103 VAL 104 GLU 105 ILE 106 LYS 107 ALA 108 ALA 109 ALA 110
Unit 6	SER 0 GLU 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 THR 10 LEU 11 SER 12 LEU 13 SER 14 PRO 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 LEU 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 ILE 29 SER 30 THR 31 PHE 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 HIS 38 LYS 39 PRO 40 GLY 41 GLN 42 ALA 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 THR 53 ARG 54 ALA 55 THR 56 GLY 57 VAL 58 PRO 59 ALA 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 ARG 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 THR 77 LEU 78 GLU 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 ARG 91 TYR 92 ASN 93 TRP 94 PRO 95 PRO 95A TYR 96 THR 97 PHE 98 GLY 99 GLN 100 GLY 101 THR 102 LYS 103 VAL 104 GLU 105 ILE 106 LYS 107 ALA 108 ALA 109 ALA 110

Ligands

Unit 7	EDO 801 EDO 802 EDO 803 SO4 804
Unit 8	SO4 501
Unit 9	EDO 201 EDO 202
Unit 10	EDO 201 SO4 202
Unit 11	EDO 201 EDO 202 EDO 203
Unit 12	EDO 801 EDO 802