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Sequence, Chains, Asymmetric and Biological Units

Title LIGAND-BOUND STRUCTURE OF CAVALLY VIRUS 3CL PROTEASE
Keywords PROTEASE, MESONIVIRUS, 3CL, PEPTIDE-BOUND, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5LAK     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   3CL PROTEASE  A 303 4500 0
2  Protein   3CL PROTEASE  B 294 4211 0
3  Protein   3CL PROTEASE  C 303 4296 0
4  Protein   3CL PROTEASE  D 286 4089 0
5  Protein   BEZ-TYR-TYR-ASN-ECC PEPTIDE INHIBITOR  I 5 32 17
6  Protein   BEZ-TYR-TYR-ASN-ECC PEPTIDE INHIBITOR  J 5 32 17
7  Protein   BEZ-TYR-TYR-ASN-ECC PEPTIDE INHIBITOR  K 5 31 17
8  Ligand   3CL PROTEASE  A 1 0 16
9  Ligand   3CL PROTEASE  B 1 0 24
10  Ligand   3CL PROTEASE  C 2 0 29
11  Ligand   3CL PROTEASE  D 1 0 13
12 Water     179 0 179
total       1385 17191 312
Proteins
Unit 1 SER1 ALA2 ALA3 SER4 ASN5 PRO6 SER7 ILE8 SER9 HIS10 ILE11 VAL12 LEU13 GLU14 MET15 PRO16 VAL17 ALA18 ILE19 ASN20 PRO21 LEU22 ILE23 LYS24 TYR25 THR26 THR27 ARG28 THR29 SER30 VAL31 SER32 SER33 LEU34 ARG35 GLY36 ALA37 VAL38 VAL39 ASN40 GLY41 TYR42 ILE43 TYR44 ILE45 GLN46 ARG47 HIS48 LEU49 PHE50 GLY51 SER52 LYS53 LYS54 GLN55 GLU56 PHE57 GLU58 ALA59 CYS60 TYR61 ASN62 ASN63 GLY64 LYS65 GLY66 LEU67 LEU68 ASN69 CYS70 LYS71 ASN72 LEU73 GLU74 ARG75 SER76 LYS77 TYR78 ASP79 ILE80 ASP81 SER82 ALA83 GLU84 LEU85 ILE86 GLY87 THR88 LEU89 ILE90 ARG91 ILE92 PRO93 LEU94 HIS95 ASP96 LYS97 HIS98 SER99 ILE100 PRO101 HIS102 ILE103 SER104 ILE105 HIS106 PRO107 ASP108 PRO109 LEU110 SER111 TYR112 ASN113 GLY114 PRO115 VAL116 THR117 LEU118 TYR119 LEU120 SER121 ARG122 TYR123 ASP124 THR125 ASN128 LYS129 ASP130 VAL131 LEU132 CYS133 VAL134 HIS135 THR136 GLY137 PHE138 MET139 SER140 GLU141 GLY142 HIS143 HIS144 ASP145 ILE146 LYS147 THR148 VAL149 PHE150 GLY151 ASP152 CYS153 GLY154 GLY155 MET156 LEU157 PHE158 ASP159 PRO160 LYS161 GLY162 ARG163 LEU164 LEU165 GLY166 LEU167 HIS168 CYS169 ALA170 GLY171 SER172 ASP173 ASP174 VAL175 VAL176 PHE177 MET178 ASP179 THR180 THR181 THR182 GLY183 LYS184 SER185 ASN186 ILE187 TRP188 THR189 SER190 TYR191 LYS192 LEU193 GLN194 HIS195 PRO196 SER197 GLU198 ILE199 MET200 ILE201 THR202 LEU203 ASN204 ASN205 GLU206 ILE207 ASN208 LEU209 PRO210 ASN211 PRO212 ALA213 ASN214 TYR215 ASP216 PHE217 GLU218 THR219 THR220 LYS221 VAL222 VAL223 TYR224 GLN225 HIS226 PRO227 LEU228 ARG229 ASN230 VAL231 CYS232 ALA233 THR234 LEU235 GLU236 THR237 LEU238 GLN239 HIS240 LEU241 THR242 ASN243 LYS244 THR245 ASN246 ALA247 LYS248 LEU249 PRO250 TYR251 ASP252 SER253 ARG254 LEU255 LEU256 SER257 ASP258 PHE259 ASN260 ILE261 THR262 ALA263 GLU264 GLN265 TYR266 ASN267 GLN268 TYR269 GLY270 TYR271 TYR272 ILE273 ASP274 TYR275 ASN276 ASN277 PHE278 VAL279 ASN280 ASN281 PHE282 ASN283 ARG284 TYR285 THR286 THR287 THR288 THR289 ILE290 GLY291 THR292 LYS293 SER294 PHE295 GLU296 THR297 CYS298 ILE299 LYS300 TYR301 GLY302 LEU303 MET304 ASP305
Unit 2 SER1 ALA2 ALA3 SER4 ASN5 PRO6 SER7 ILE8 SER9 HIS10 ILE11 VAL12 LEU13 GLU14 MET15 PRO16 VAL17 ALA18 ILE19 ASN20 PRO21 LEU22 ILE23 LYS24 TYR25 THR26 SER32 SER33 LEU34 ARG35 GLY36 ALA37 VAL38 VAL39 ASN40 GLY41 TYR42 ILE43 TYR44 ILE45 GLN46 ARG47 HIS48 LEU49 PHE50 GLY51 SER52 LYS53 LYS54 GLN55 GLU56 PHE57 GLU58 ALA59 CYS60 TYR61 ASN62 ASN63 GLY64 LYS65 GLY66 LEU67 LEU68 ASN69 CYS70 LYS71 ASN72 LEU73 GLU74 ARG75 SER76 LYS77 TYR78 ASP79 ILE80 ASP81 SER82 ALA83 GLU84 LEU85 ILE86 GLY87 THR88 LEU89 ILE90 ARG91 ILE92 PRO93 LEU94 HIS95 ASP96 LYS97 HIS98 SER99 ILE100 PRO101 HIS102 ILE103 SER104 ILE105 HIS106 PRO107 ASP108 PRO109 LEU110 SER111 TYR112 ASN113 GLY114 PRO115 VAL116 THR117 LEU118 TYR119 LEU120 SER121 ARG122 TYR123 ASP124 THR125 GLU126 LEU127 ASN128 LYS129 ASP130 VAL131 LEU132 CYS133 VAL134 HIS135 THR136 GLY137 PHE138 MET139 SER140 GLU141 GLY142 HIS143 HIS144 ASP145 ILE146 LYS147 THR148 VAL149 PHE150 GLY151 ASP152 CYS153 GLY154 GLY155 MET156 LEU157 PHE158 ASP159 PRO160 LYS161 GLY162 ARG163 LEU164 LEU165 GLY166 LEU167 HIS168 CYS169 ALA170 GLY171 SER172 ASP173 ASP174 VAL175 VAL176 PHE177 MET178 ASP179 SER185 ASN186 ILE187 TRP188 THR189 SER190 TYR191 LYS192 GLN194 HIS195 PRO196 SER197 GLU198 ILE199 MET200 ILE201 THR202 LEU203 ASN204 ASN205 GLU206 ILE207 ASN208 LEU209 PRO210 ASN211 PRO212 ALA213 ASN214 TYR215 ASP216 PHE217 GLU218 THR219 THR220 LYS221 VAL222 VAL223 TYR224 GLN225 HIS226 PRO227 LEU228 ARG229 ASN230 VAL231 CYS232 ALA233 THR234 LEU235 GLU236 THR237 LEU238 GLN239 HIS240 LEU241 THR242 ASN243 LYS244 THR245 ASN246 ALA247 LYS248 LEU249 PRO250 TYR251 ASP252 SER253 ARG254 LEU255 LEU256 SER257 ASP258 PHE259 ASN260 ILE261 THR262 ALA263 GLU264 GLN265 TYR266 ASN267 GLN268 TYR269 GLY270 TYR271 TYR272 ILE273 ASP274 TYR275 ASN276 ASN277 PHE278 VAL279 ASN280 ASN281 PHE282 ASN283 ARG284 TYR285 THR286 THR287 THR288 THR289 ILE290 GLY291 THR292 LYS293 SER294 PHE295 GLU296 THR297 CYS298 ILE299 LYS300 TYR301 GLY302 LEU303 MET304 ASP305
Unit 3 SER1 ALA2 ALA3 SER4 ASN5 PRO6 SER7 ILE8 SER9 HIS10 ILE11 VAL12 LEU13 GLU14 MET15 PRO16 VAL17 ALA18 ILE19 ASN20 PRO21 LEU22 ILE23 LYS24 TYR25 THR26 THR27 ARG28 THR29 SER30 VAL31 SER32 SER33 LEU34 ARG35 GLY36 ALA37 VAL38 VAL39 ASN40 GLY41 TYR42 ILE43 TYR44 ILE45 GLN46 ARG47 HIS48 LEU49 PHE50 GLY51 SER52 LYS53 LYS54 GLN55 GLU56 PHE57 GLU58 ALA59 CYS60 TYR61 ASN62 ASN63 GLY64 LYS65 GLY66 LEU67 LEU68 ASN69 CYS70 LYS71 ASN72 LEU73 GLU74 ARG75 SER76 LYS77 TYR78 ASP79 ILE80 ASP81 SER82 ALA83 GLU84 LEU85 ILE86 GLY87 THR88 LEU89 ILE90 ARG91 ILE92 PRO93 LEU94 HIS95 ASP96 LYS97 HIS98 SER99 ILE100 PRO101 HIS102 ILE103 SER104 ILE105 HIS106 PRO107 ASP108 PRO109 LEU110 SER111 TYR112 ASN113 GLY114 PRO115 VAL116 THR117 LEU118 TYR119 LEU120 SER121 ARG122 TYR123 ASP124 THR125 ASN128 LYS129 ASP130 VAL131 LEU132 CYS133 VAL134 HIS135 THR136 GLY137 PHE138 MET139 SER140 GLU141 GLY142 HIS143 HIS144 ASP145 ILE146 LYS147 THR148 VAL149 PHE150 GLY151 ASP152 CYS153 GLY154 GLY155 MET156 LEU157 PHE158 ASP159 PRO160 LYS161 GLY162 ARG163 LEU164 LEU165 GLY166 LEU167 HIS168 CYS169 ALA170 GLY171 SER172 ASP173 ASP174 VAL175 VAL176 PHE177 MET178 ASP179 THR180 THR181 THR182 GLY183 LYS184 SER185 ASN186 ILE187 TRP188 THR189 SER190 TYR191 LYS192 LEU193 GLN194 HIS195 PRO196 SER197 GLU198 ILE199 MET200 ILE201 THR202 LEU203 ASN204 ASN205 GLU206 ILE207 ASN208 LEU209 PRO210 ASN211 PRO212 ALA213 ASN214 TYR215 ASP216 PHE217 GLU218 THR219 THR220 LYS221 VAL222 VAL223 TYR224 GLN225 HIS226 PRO227 LEU228 ARG229 ASN230 VAL231 CYS232 ALA233 THR234 LEU235 GLU236 THR237 LEU238 GLN239 HIS240 LEU241 THR242 ASN243 LYS244 THR245 ASN246 ALA247 LYS248 LEU249 PRO250 TYR251 ASP252 SER253 ARG254 LEU255 LEU256 SER257 ASP258 PHE259 ASN260 ILE261 THR262 ALA263 GLU264 GLN265 TYR266 ASN267 GLN268 TYR269 GLY270 TYR271 TYR272 ILE273 ASP274 TYR275 ASN276 ASN277 PHE278 VAL279 ASN280 ASN281 PHE282 ASN283 ARG284 TYR285 THR286 THR287 THR288 THR289 ILE290 GLY291 THR292 LYS293 SER294 PHE295 GLU296 THR297 CYS298 ILE299 LYS300 TYR301 GLY302 LEU303 MET304 ASP305
Unit 4 SER1 ALA2 ALA3 SER4 ASN5 PRO6 SER7 ILE8 SER9 HIS10 ILE11 VAL12 LEU13 GLU14 MET15 PRO16 VAL17 ALA18 ILE19 ASN20 PRO21 LEU22 ILE23 LYS24 TYR25 THR26 THR27 VAL31 SER32 SER33 LEU34 ARG35 GLY36 ALA37 VAL38 VAL39 ASN40 GLY41 TYR42 ILE43 TYR44 ILE45 GLN46 ARG47 HIS48 LEU49 PHE50 GLY51 SER52 LYS53 GLU56 PHE57 GLU58 ALA59 CYS60 TYR61 ASN62 CYS70 LYS71 ASN72 LEU73 GLU74 ARG75 SER76 LYS77 TYR78 ASP79 ILE80 ASP81 SER82 ALA83 GLU84 LEU85 ILE86 GLY87 THR88 LEU89 ILE90 ARG91 ILE92 PRO93 LEU94 HIS95 ASP96 LYS97 HIS98 SER99 ILE100 PRO101 HIS102 ILE103 SER104 ILE105 HIS106 PRO107 ASP108 PRO109 LEU110 SER111 TYR112 ASN113 GLY114 PRO115 VAL116 THR117 LEU118 TYR119 LEU120 SER121 ARG122 TYR123 ASP124 THR125 GLU126 ASP130 VAL131 LEU132 CYS133 VAL134 HIS135 THR136 GLY137 PHE138 MET139 SER140 GLU141 GLY142 HIS143 HIS144 ASP145 ILE146 LYS147 THR148 VAL149 PHE150 GLY151 ASP152 CYS153 GLY154 GLY155 MET156 LEU157 PHE158 ASP159 PRO160 LYS161 GLY162 ARG163 LEU164 LEU165 GLY166 LEU167 HIS168 CYS169 ALA170 GLY171 SER172 ASP173 ASP174 VAL175 VAL176 PHE177 MET178 ASP179 THR180 THR181 THR182 GLY183 LYS184 SER185 ASN186 ILE187 TRP188 THR189 SER190 TYR191 LYS192 LEU193 GLN194 HIS195 PRO196 SER197 GLU198 ILE199 MET200 ILE201 THR202 LEU203 ASN204 ASN205 GLU206 ILE207 ASN208 LEU209 PRO210 ASN211 PRO212 ALA213 ASN214 TYR215 ASP216 LYS221 VAL222 VAL223 TYR224 GLN225 HIS226 PRO227 LEU228 ARG229 ASN230 VAL231 CYS232 ALA233 THR234 LEU235 GLU236 THR237 LEU238 GLN239 HIS240 LEU241 THR242 ASN243 LYS244 THR245 ASN246 ALA247 LYS248 LEU249 PRO250 TYR251 ASP252 SER253 ARG254 LEU255 LEU256 SER257 ASP258 PHE259 ASN260 ILE261 THR262 ALA263 GLU264 GLN265 TYR266 ASN267 GLN268 TYR269 GLY270 TYR271 TYR272 ILE273 ASP274 TYR275 ASN276 ASN277 PHE278 VAL279 ASN280 ASN281 PHE282 ASN283 ARG284 TYR285 THR286 THR287 THR288 THR289 ILE290 GLY291 THR292 LYS293 SER294 PHE295 GLU296 THR297 CYS298 ILE299 LYS300 TYR301 GLY302 LEU303 MET304 ASP305
Unit 5 BEZ1 TYR2 TYR3 ASN4 ECC5
Unit 6 BEZ1 TYR2 TYR3 ASN4 ECC5
Unit 7 BEZ1 TYR2 TYR3 ASN4 ECC5
Ligands
Unit 8 1PE401
Unit 9 PGE401
Unit 10 PGE401 1PE402
Unit 11 1PE401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany