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Title | HIF PROLYL HYDROXYLASE 2 (PHD2/ EGLN1) IN COMPLEX WITH 2-OXO (2OG) AND HIF-1ALPHA CODD (556-574) | |
Keywords | OXIDOREDUCTASE, NON-HEME DIOXYGENASE, IRON, 2-OXOGLUTARATE, INDUCIBLE FACTOR, HIF, HIF PROLYL HYDROXYLASE DOMAIN 2, PHD OXYGENASE, HYPOXIA, DNA-BINDING, METAL-BINDING, TRANSCRIPTI HELIX-LOOP-HELIX-BETA, DSBH, FACIAL TRIAD, CYTOPLASM, TRANSCRIPTION/EPIGENETIC REGULATION, SIGNALING, DEVELOPMENT STRUCTURE, BETA-HYDROXYLATION, TRANSCRIPTION ACTIVATOR/INHI UBL CONJUGATION, POLYMORPHISM, VITAMIN C, ZINC-FINGER, FAMI ERYTHROCYTOSIS, BREAST CANCER, TRANSCRIPTION COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 5L9B | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | EGL NINE HOMOLOG 1 | A | 222 | 1695 | 0 |
2 | Protein | EGL NINE HOMOLOG 1 | B | 218 | 1681 | 0 |
3 | Protein | HYPOXIA-INDUCIBLE FACTOR 1-ALPHA | C | 18 | 145 | 0 |
4 | Protein | HYPOXIA-INDUCIBLE FACTOR 1-ALPHA | D | 18 | 146 | 0 |
5 | Ligand | EGL NINE HOMOLOG 1 | A | 2 | 0 | 11 |
6 | Ligand | EGL NINE HOMOLOG 1 | B | 2 | 0 | 11 |
7 | Water | 298 | 0 | 298 | ||
total | 778 | 3667 | 320 |
Unit 1 | LEU188 PRO189 ALA190 LEU191 LYS192 LEU193 ALA194 LEU195 GLU196 TYR197 ILE198 VAL199 PRO200 ALA201 MET202 ASN203 LYS204 HIS205 GLY206 ILE207 CYS208 VAL209 VAL210 ASP211 ASP212 PHE213 LEU214 GLY215 LYS216 GLU217 THR218 GLY219 GLN220 GLN221 ILE222 GLY223 ASP224 GLU225 VAL226 ARG227 ALA228 LEU229 HIS230 ASP231 THR232 GLY233 LYS234 PHE235 THR236 ASP237 GLY238 GLN239 LEU240 VAL241 SER242 GLN243 LYS244 SER245 ASP246 SER247 SER248 LYS249 ASP250 ILE251 ARG252 GLY253 ASP254 LYS255 ILE256 THR257 TRP258 ILE259 GLU260 GLY261 LYS262 GLU263 PRO264 GLY265 CYS266 GLU267 THR268 ILE269 GLY270 LEU271 LEU272 MET273 SER274 SER275 MET276 ASP277 ASP278 LEU279 ILE280 ARG281 HIS282 CYS283 ASN284 GLY285 LYS286 LEU287 GLY288 SER289 TYR290 LYS291 ILE292 ASN293 GLY294 ARG295 THR296 LYS297 ALA298 MET299 VAL300 ALA301 CYS302 TYR303 PRO304 GLY305 ASN306 GLY307 THR308 GLY309 TYR310 VAL311 ARG312 HIS313 VAL314 ASP315 ASN316 PRO317 ASN318 GLY319 ASP320 GLY321 ARG322 CYS323 VAL324 THR325 CYS326 ILE327 TYR328 TYR329 LEU330 ASN331 LYS332 ASP333 TRP334 ASP335 ALA336 LYS337 VAL338 SER339 GLY340 GLY341 ILE342 LEU343 ARG344 ILE345 PHE346 PRO347 GLU348 GLY349 LYS350 ALA351 GLN352 PHE353 ALA354 ASP355 ILE356 GLU357 PRO358 LYS359 PHE360 ASP361 ARG362 LEU363 LEU364 PHE365 PHE366 TRP367 SER368 ASP369 ARG370 ARG371 ASN372 PRO373 HIS374 GLU375 VAL376 GLN377 PRO378 ALA379 TYR380 ALA381 THR382 ARG383 TYR384 ALA385 ILE386 THR387 VAL388 TRP389 TYR390 PHE391 ASP392 ALA393 ASP394 GLU395 ARG396 ALA397 ALA398 ALA399 LYS400 VAL401 LYS402 TYR403 LEU404 THR405 GLY406 GLU407 LYS408 GLY409 |
Unit 2 | LEU188 PRO189 ALA190 LEU191 LYS192 LEU193 ALA194 LEU195 GLU196 TYR197 ILE198 VAL199 PRO200 ALA201 MET202 ASN203 LYS204 HIS205 GLY206 ILE207 CYS208 VAL209 VAL210 ASP211 ASP212 PHE213 LEU214 GLY215 LYS216 GLU217 THR218 GLY219 GLN220 GLN221 ILE222 GLY223 ASP224 GLU225 VAL226 ARG227 ALA228 LEU229 HIS230 ASP231 THR232 GLY233 LYS234 PHE235 THR236 ASP237 GLY238 GLN239 LEU240 VAL241 SER242 GLN243 LYS244 SER245 ASP246 SER247 SER248 LYS249 ASP250 ILE251 ARG252 GLY253 ASP254 LYS255 ILE256 THR257 TRP258 ILE259 GLU260 GLY261 LYS262 GLU263 PRO264 GLY265 CYS266 GLU267 THR268 ILE269 GLY270 LEU271 LEU272 MET273 SER274 SER275 MET276 ASP277 ASP278 LEU279 ILE280 ARG281 HIS282 CYS283 ASN284 GLY285 LYS286 LEU287 GLY288 SER289 TYR290 LYS291 ILE292 ASN293 GLY294 ARG295 THR296 LYS297 ALA298 MET299 VAL300 ALA301 CYS302 TYR303 PRO304 GLY305 ASN306 GLY307 THR308 GLY309 TYR310 VAL311 ARG312 HIS313 VAL314 ASP315 ASN316 PRO317 ASN318 GLY319 ASP320 GLY321 ARG322 CYS323 VAL324 THR325 CYS326 ILE327 TYR328 TYR329 LEU330 ASN331 LYS332 ASP333 TRP334 ASP335 ALA336 LYS337 VAL338 SER339 GLY340 GLY341 ILE342 LEU343 ARG344 ILE345 PHE346 PRO347 GLU348 GLY349 LYS350 ALA351 GLN352 PHE353 ALA354 ASP355 ILE356 GLU357 PRO358 LYS359 PHE360 ASP361 ARG362 LEU363 LEU364 PHE365 PHE366 TRP367 SER368 ASP369 ARG370 ARG371 ASN372 PRO373 HIS374 GLU375 VAL376 GLN377 PRO378 ALA379 TYR380 ALA381 THR382 ARG383 TYR384 ALA385 ILE386 THR387 VAL388 TRP389 TYR390 PHE391 ASP392 ALA393 ASP394 GLU395 ARG396 ALA397 ALA398 ALA399 LYS400 VAL401 LYS402 TYR403 LEU404 THR405 |
Unit 3 | LEU557 ASP558 LEU559 GLU560 MET561 LEU562 ALA563 PRO564 TYR565 ILE566 PRO567 MET568 ASP569 ASP570 ASP571 PHE572 GLN573 LEU574 |
Unit 4 | LEU557 ASP558 LEU559 GLU560 MET561 LEU562 ALA563 PRO564 TYR565 ILE566 PRO567 MET568 ASP569 ASP570 ASP571 PHE572 GLN573 LEU574 |
Unit 5 | MN501 AKG502 |
Unit 6 | MN501 AKG502 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |