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Sequence, Chains, Asymmetric and Biological Units

Title NAB2 ZN FINGERS 5-7 BOUND TO A11G RNA
Keywords NAB2, ZN FINGER, RNA, RNA BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5L2L     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NAB2P  A 72 1142 0
2  Protein   NAB2P  B 74 1163 0
3  RNA    C 10 332 0
4  RNA    D 11 365 0
5  Protein   NAB2P  E 72 1145 0
6  Protein   NAB2P  F 75 1178 0
7  RNA    G 10 332 0
8  RNA    H 10 332 0
9  Ligand   NAB2P  A 4 0 4
10  Ligand   NAB2P  B 3 0 3
11  Ligand   NAB2P  E 3 0 3
12  Ligand   NAB2P  F 4 0 4
13 Water     685 0 685
total       1033 5989 699
Proteins
Unit 1 SER408 GLU409 LYS410 SER411 LEU412 GLU413 GLN414 CYS415 LYS416 PHE417 GLY418 THR419 HIS420 CYS421 THR422 ASN423 LYS424 ARG425 CYS426 LYS427 TYR428 ARG429 HIS430 ALA431 ARG432 SER433 HIS434 ILE435 MET436 CYS437 ARG438 GLU439 GLY440 ALA441 ASN442 CYS443 THR444 ARG445 ILE446 ASP447 CYS448 LEU449 PHE450 GLY451 HIS452 PRO453 ILE454 ASN455 GLU456 ASP457 CYS458 ARG459 PHE460 GLY461 VAL462 ASN463 CYS464 LYS465 ASN466 ILE467 TYR468 CYS469 LEU470 PHE471 ARG472 HIS473 PRO474 PRO475 GLY476 ARG477 VAL478 LEU479
Unit 2 GLY407 SER408 GLU409 LYS410 SER411 LEU412 GLU413 GLN414 CYS415 LYS416 PHE417 GLY418 THR419 HIS420 CYS421 THR422 ASN423 LYS424 ARG425 CYS426 LYS427 TYR428 ARG429 HIS430 ALA431 ARG432 SER433 HIS434 ILE435 MET436 CYS437 ARG438 GLU439 GLY440 ALA441 ASN442 CYS443 THR444 ARG445 ILE446 ASP447 CYS448 LEU449 PHE450 GLY451 HIS452 PRO453 ILE454 ASN455 GLU456 ASP457 CYS458 ARG459 PHE460 GLY461 VAL462 ASN463 CYS464 LYS465 ASN466 ILE467 TYR468 CYS469 LEU470 PHE471 ARG472 HIS473 PRO474 PRO475 GLY476 ARG477 VAL478 LEU479 PRO480
Unit 5 GLU409 LYS410 SER411 LEU412 GLU413 GLN414 CYS415 LYS416 PHE417 GLY418 THR419 HIS420 CYS421 THR422 ASN423 LYS424 ARG425 CYS426 LYS427 TYR428 ARG429 HIS430 ALA431 ARG432 SER433 HIS434 ILE435 MET436 CYS437 ARG438 GLU439 GLY440 ALA441 ASN442 CYS443 THR444 ARG445 ILE446 ASP447 CYS448 LEU449 PHE450 GLY451 HIS452 PRO453 ILE454 ASN455 GLU456 ASP457 CYS458 ARG459 PHE460 GLY461 VAL462 ASN463 CYS464 LYS465 ASN466 ILE467 TYR468 CYS469 LEU470 PHE471 ARG472 HIS473 PRO474 PRO475 GLY476 ARG477 VAL478 LEU479 PRO480
Unit 6 GLY407 SER408 GLU409 LYS410 SER411 LEU412 GLU413 GLN414 CYS415 LYS416 PHE417 GLY418 THR419 HIS420 CYS421 THR422 ASN423 LYS424 ARG425 CYS426 LYS427 TYR428 ARG429 HIS430 ALA431 ARG432 SER433 HIS434 ILE435 MET436 CYS437 ARG438 GLU439 GLY440 ALA441 ASN442 CYS443 THR444 ARG445 ILE446 ASP447 CYS448 LEU449 PHE450 GLY451 HIS452 PRO453 ILE454 ASN455 GLU456 ASP457 CYS458 ARG459 PHE460 GLY461 VAL462 ASN463 CYS464 LYS465 ASN466 ILE467 TYR468 CYS469 LEU470 PHE471 ARG472 HIS473 PRO474 PRO475 GLY476 ARG477 VAL478 LEU479 PRO480 GLU481
Nucleic acids
Unit 3 A3 A4 A5 A6 A7 A8 A9 A10 A11 G12
Unit 4 A2 A3 A4 A5 A6 A7 A8 A9 A10 A11 G12
Unit 7 A3 A4 A5 A6 A7 A8 A9 A10 A11 G12
Unit 8 A3 A4 A5 A6 A7 A8 A9 A10 A11 G12
Ligands
Unit 9 ZN501 ZN502 ZN503 ZN504
Unit 10 ZN501 ZN502 ZN503
Unit 11 ZN501 ZN502 ZN503
Unit 12 ZN501 ZN502 ZN503 ZN504
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany