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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF RAT GLUTAMATE RECEPTOR DELTA-2 EXTRACEL DOMAIN
Keywords SYNAPSE PROTEIN, CELL SURFACE PROTEIN, GLYCOPROTEIN, NERVOUS PROTEIN BINDING
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5L2E     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLUTAMATE RECEPTOR IONOTROPIC, DELTA-2,GLUTAMATE IONOTROPIC, DELTA-2  A 648 5136 0
2  Protein   GLUTAMATE RECEPTOR IONOTROPIC, DELTA-2,GLUTAMATE IONOTROPIC, DELTA-2  B 648 5136 0
3  Protein   GLUTAMATE RECEPTOR IONOTROPIC, DELTA-2,GLUTAMATE IONOTROPIC, DELTA-2  C 648 5136 0
total       1944 15408 0
Proteins
Unit 1 ASP24 SER25 ILE26 ILE27 HIS28 ILE29 GLY30 ALA31 ILE32 PHE33 ASP34 GLU35 SER36 ALA37 LYS38 LYS39 ASP40 ASP41 GLU42 VAL43 PHE44 ARG45 THR46 ALA47 VAL48 GLY49 ASP50 LEU51 ASN52 GLN53 ASN54 GLU55 GLU56 ILE57 LEU58 GLN59 THR60 GLU61 LYS62 ILE63 THR64 PHE65 SER66 VAL67 THR68 PHE69 VAL70 ASP71 GLY72 ASN73 ASN74 PRO75 PHE76 GLN77 ALA78 VAL79 GLN80 GLU81 ALA82 CYS83 GLU84 LEU85 MET86 ASN87 GLN88 GLY89 ILE90 LEU91 ALA92 LEU93 VAL94 SER95 SER96 ILE97 GLY98 CYS99 THR100 SER101 ALA102 GLY103 SER104 LEU105 GLN106 SER107 LEU108 ALA109 ASP110 ALA111 MET112 HIS113 ILE114 PRO115 HIS116 LEU117 PHE118 ILE119 GLN120 ARG121 SER122 THR123 ALA124 GLY125 THR126 PRO127 ARG128 SER129 GLY130 CYS131 GLY132 LEU133 THR134 ARG135 SER136 ASN137 ARG138 ASN139 ASP140 ASP141 TYR142 THR143 LEU144 SER145 VAL146 ARG147 PRO148 PRO149 VAL150 TYR151 LEU152 ASN153 GLU154 VAL155 ILE156 LEU157 ARG158 VAL159 VAL160 THR161 GLU162 TYR163 ALA164 TRP165 GLN166 LYS167 PHE168 ILE169 ILE170 PHE171 TYR172 ASP173 SER174 GLU175 TYR176 ASP177 ILE178 ARG179 GLY180 ILE181 GLN182 GLU183 PHE184 LEU185 ASP186 LYS187 VAL188 SER189 GLN190 GLN191 GLY192 MET193 ASP194 VAL195 ALA196 LEU197 GLN198 LYS199 VAL200 GLU201 ASN202 ASN203 ILE204 ASN205 LYS206 MET207 ILE208 THR209 THR210 LEU211 PHE212 ASP213 THR214 MET215 ARG216 ILE217 GLU218 GLU219 LEU220 ASN221 ARG222 TYR223 ARG224 ASP225 THR226 LEU227 ARG228 ARG229 ALA230 ILE231 LEU232 VAL233 MET234 ASN235 PRO236 ALA237 THR238 ALA239 LYS240 SER241 PHE242 ILE243 SER244 GLU245 VAL246 VAL247 GLU248 THR249 ASN250 LEU251 VAL252 ALA253 PHE254 ASP255 CYS256 HIS257 TRP258 ILE259 ILE260 ILE261 ASN262 GLU263 GLU264 ILE265 ASN266 ASP267 VAL268 ASP269 VAL270 GLN271 GLU272 LEU273 VAL274 ARG275 ARG276 SER277 ILE278 GLY279 ARG280 LEU281 THR282 ILE283 ILE284 ARG285 GLN286 THR287 PHE288 PRO289 VAL290 PRO291 GLN292 ASN293 ILE294 SER295 GLN296 ARG297 CYS298 PHE299 ARG300 GLY301 ASN302 HIS303 ARG304 ILE305 SER306 SER307 THR308 LEU309 CYS310 ASP311 PRO312 LYS313 ASP314 PRO315 PHE316 ALA317 GLN318 ASN319 MET320 GLU321 ILE322 SER323 ASN324 LEU325 TYR326 ILE327 TYR328 ASP329 THR330 VAL331 LEU332 LEU333 LEU334 ALA335 ASN336 ALA337 PHE338 HIS339 LYS340 LYS341 LEU342 GLN343 ASP344 ARG345 LYS346 TRP347 HIS348 SER349 MET350 ALA351 SER352 LEU353 SER354 CYS355 ILE356 ARG357 LYS358 ASN359 SER360 LYS361 PRO362 TRP363 GLN364 GLY365 GLY366 ARG367 SER368 MET369 LEU370 GLU371 THR372 ILE373 LYS374 LYS375 GLY376 GLY377 VAL378 ASN379 GLY380 LEU381 THR382 GLY383 ASP384 LEU385 GLU386 PHE387 GLY388 GLU389 ASN390 GLY391 GLY392 ASN393 PRO394 ASN395 VAL396 HIS397 PHE398 GLU399 ILE400 LEU401 GLY402 THR403 GLY412 VAL413 ARG414 LYS415 LEU416 GLY417 CYS418 TRP419 ASN420 PRO421 VAL422 THR423 GLY424 LEU425 ASN426 GLY427 SER428 LEU429 GLY440 VAL441 VAL442 LEU443 ARG444 VAL445 VAL446 THR447 VAL448 LEU449 GLU450 GLU451 PRO452 PHE453 VAL454 MET455 VAL456 SER457 GLU458 ASN459 VAL460 LEU461 GLY462 LYS463 PRO464 LYS465 LYS466 TYR467 GLN468 GLY469 PHE470 SER471 ILE472 ASP473 VAL474 LEU475 ASP476 ALA477 LEU478 SER479 ASN480 TYR481 LEU482 GLY483 PHE484 ASN485 TYR486 GLU487 ILE488 TYR489 VAL490 ALA491 PRO492 ASP493 HIS494 LYS495 TYR496 GLY497 SER498 PRO499 GLN500 GLU501 ASP502 GLY503 THR504 TRP505 ASN506 GLY507 LEU508 VAL509 GLY510 GLU511 LEU512 VAL513 PHE514 LYS515 ARG516 ALA517 ASP518 ILE519 GLY520 ILE521 SER522 ALA523 LEU524 THR525 ILE526 THR527 PRO528 ASP529 ARG530 GLU531 ASN532 VAL533 VAL534 ASP535 PHE536 THR537 THR538 ARG539 TYR540 MET541 ASP542 TYR543 SER544 VAL545 GLY546 VAL547 LEU548 LEU549 ARG550 ARG551 SER664 ILE665 GLN666 SER667 LEU668 GLN669 ASP670 LEU671 SER672 LYS673 GLN674 THR675 ASP676 ILE677 PRO678 TYR679 GLY680 THR681 VAL682 LEU683 ASP684 SER685 ALA686 VAL687 TYR688 GLN689 HIS690 VAL691 ARG692 MET693 LYS694 GLY695 LEU696 ASN697 PRO698 SER703 MET704 TYR705 SER706 GLN707 MET708 TRP709 ARG710 MET711 ILE712 ASN713 ASN720 ASN721 VAL722 LEU723 GLU724 SER725 GLN726 ALA727 GLY728 ILE729 GLN730 LYS731 VAL732 LYS733 TYR734 GLY735 ASN736 TYR737 ALA738 PHE739 VAL740 TRP741 ASP742 ALA743 ALA744 VAL745 LEU746 GLU747 TYR748 VAL749 ALA750 ILE751 ASN752 ASP753 PRO754 ASP755 CYS756 SER757 PHE758 TYR759 THR760 VAL761 GLY762 ASN763 THR764 VAL765 ALA766 ASP767 ARG768 GLY769 TYR770 GLY771 ILE772 ALA773 LEU774 GLN775 HIS776 GLY777 SER778 PRO779 TYR780 ARG781 ASP782 VAL783 PHE784 SER785 GLN786 ARG787 ILE788 LEU789 GLU790 LEU791 GLN792 GLN793 SER794 GLY795 ASP796 MET797 ASP798 ILE799 LEU800 LYS801 HIS802 LYS803 TRP804 TRP805 PRO806 LYS807 ASN808 GLY809 GLN810 CYS811
Unit 2 ASP24 SER25 ILE26 ILE27 HIS28 ILE29 GLY30 ALA31 ILE32 PHE33 ASP34 GLU35 SER36 ALA37 LYS38 LYS39 ASP40 ASP41 GLU42 VAL43 PHE44 ARG45 THR46 ALA47 VAL48 GLY49 ASP50 LEU51 ASN52 GLN53 ASN54 GLU55 GLU56 ILE57 LEU58 GLN59 THR60 GLU61 LYS62 ILE63 THR64 PHE65 SER66 VAL67 THR68 PHE69 VAL70 ASP71 GLY72 ASN73 ASN74 PRO75 PHE76 GLN77 ALA78 VAL79 GLN80 GLU81 ALA82 CYS83 GLU84 LEU85 MET86 ASN87 GLN88 GLY89 ILE90 LEU91 ALA92 LEU93 VAL94 SER95 SER96 ILE97 GLY98 CYS99 THR100 SER101 ALA102 GLY103 SER104 LEU105 GLN106 SER107 LEU108 ALA109 ASP110 ALA111 MET112 HIS113 ILE114 PRO115 HIS116 LEU117 PHE118 ILE119 GLN120 ARG121 SER122 THR123 ALA124 GLY125 THR126 PRO127 ARG128 SER129 GLY130 CYS131 GLY132 LEU133 THR134 ARG135 SER136 ASN137 ARG138 ASN139 ASP140 ASP141 TYR142 THR143 LEU144 SER145 VAL146 ARG147 PRO148 PRO149 VAL150 TYR151 LEU152 ASN153 GLU154 VAL155 ILE156 LEU157 ARG158 VAL159 VAL160 THR161 GLU162 TYR163 ALA164 TRP165 GLN166 LYS167 PHE168 ILE169 ILE170 PHE171 TYR172 ASP173 SER174 GLU175 TYR176 ASP177 ILE178 ARG179 GLY180 ILE181 GLN182 GLU183 PHE184 LEU185 ASP186 LYS187 VAL188 SER189 GLN190 GLN191 GLY192 MET193 ASP194 VAL195 ALA196 LEU197 GLN198 LYS199 VAL200 GLU201 ASN202 ASN203 ILE204 ASN205 LYS206 MET207 ILE208 THR209 THR210 LEU211 PHE212 ASP213 THR214 MET215 ARG216 ILE217 GLU218 GLU219 LEU220 ASN221 ARG222 TYR223 ARG224 ASP225 THR226 LEU227 ARG228 ARG229 ALA230 ILE231 LEU232 VAL233 MET234 ASN235 PRO236 ALA237 THR238 ALA239 LYS240 SER241 PHE242 ILE243 SER244 GLU245 VAL246 VAL247 GLU248 THR249 ASN250 LEU251 VAL252 ALA253 PHE254 ASP255 CYS256 HIS257 TRP258 ILE259 ILE260 ILE261 ASN262 GLU263 GLU264 ILE265 ASN266 ASP267 VAL268 ASP269 VAL270 GLN271 GLU272 LEU273 VAL274 ARG275 ARG276 SER277 ILE278 GLY279 ARG280 LEU281 THR282 ILE283 ILE284 ARG285 GLN286 THR287 PHE288 PRO289 VAL290 PRO291 GLN292 ASN293 ILE294 SER295 GLN296 ARG297 CYS298 PHE299 ARG300 GLY301 ASN302 HIS303 ARG304 ILE305 SER306 SER307 THR308 LEU309 CYS310 ASP311 PRO312 LYS313 ASP314 PRO315 PHE316 ALA317 GLN318 ASN319 MET320 GLU321 ILE322 SER323 ASN324 LEU325 TYR326 ILE327 TYR328 ASP329 THR330 VAL331 LEU332 LEU333 LEU334 ALA335 ASN336 ALA337 PHE338 HIS339 LYS340 LYS341 LEU342 GLN343 ASP344 ARG345 LYS346 TRP347 HIS348 SER349 MET350 ALA351 SER352 LEU353 SER354 CYS355 ILE356 ARG357 LYS358 ASN359 SER360 LYS361 PRO362 TRP363 GLN364 GLY365 GLY366 ARG367 SER368 MET369 LEU370 GLU371 THR372 ILE373 LYS374 LYS375 GLY376 GLY377 VAL378 ASN379 GLY380 LEU381 THR382 GLY383 ASP384 LEU385 GLU386 PHE387 GLY388 GLU389 ASN390 GLY391 GLY392 ASN393 PRO394 ASN395 VAL396 HIS397 PHE398 GLU399 ILE400 LEU401 GLY402 THR403 GLY412 VAL413 ARG414 LYS415 LEU416 GLY417 CYS418 TRP419 ASN420 PRO421 VAL422 THR423 GLY424 LEU425 ASN426 GLY427 SER428 LEU429 GLY440 VAL441 VAL442 LEU443 ARG444 VAL445 VAL446 THR447 VAL448 LEU449 GLU450 GLU451 PRO452 PHE453 VAL454 MET455 VAL456 SER457 GLU458 ASN459 VAL460 LEU461 GLY462 LYS463 PRO464 LYS465 LYS466 TYR467 GLN468 GLY469 PHE470 SER471 ILE472 ASP473 VAL474 LEU475 ASP476 ALA477 LEU478 SER479 ASN480 TYR481 LEU482 GLY483 PHE484 ASN485 TYR486 GLU487 ILE488 TYR489 VAL490 ALA491 PRO492 ASP493 HIS494 LYS495 TYR496 GLY497 SER498 PRO499 GLN500 GLU501 ASP502 GLY503 THR504 TRP505 ASN506 GLY507 LEU508 VAL509 GLY510 GLU511 LEU512 VAL513 PHE514 LYS515 ARG516 ALA517 ASP518 ILE519 GLY520 ILE521 SER522 ALA523 LEU524 THR525 ILE526 THR527 PRO528 ASP529 ARG530 GLU531 ASN532 VAL533 VAL534 ASP535 PHE536 THR537 THR538 ARG539 TYR540 MET541 ASP542 TYR543 SER544 VAL545 GLY546 VAL547 LEU548 LEU549 ARG550 ARG551 SER664 ILE665 GLN666 SER667 LEU668 GLN669 ASP670 LEU671 SER672 LYS673 GLN674 THR675 ASP676 ILE677 PRO678 TYR679 GLY680 THR681 VAL682 LEU683 ASP684 SER685 ALA686 VAL687 TYR688 GLN689 HIS690 VAL691 ARG692 MET693 LYS694 GLY695 LEU696 ASN697 PRO698 SER703 MET704 TYR705 SER706 GLN707 MET708 TRP709 ARG710 MET711 ILE712 ASN713 ASN720 ASN721 VAL722 LEU723 GLU724 SER725 GLN726 ALA727 GLY728 ILE729 GLN730 LYS731 VAL732 LYS733 TYR734 GLY735 ASN736 TYR737 ALA738 PHE739 VAL740 TRP741 ASP742 ALA743 ALA744 VAL745 LEU746 GLU747 TYR748 VAL749 ALA750 ILE751 ASN752 ASP753 PRO754 ASP755 CYS756 SER757 PHE758 TYR759 THR760 VAL761 GLY762 ASN763 THR764 VAL765 ALA766 ASP767 ARG768 GLY769 TYR770 GLY771 ILE772 ALA773 LEU774 GLN775 HIS776 GLY777 SER778 PRO779 TYR780 ARG781 ASP782 VAL783 PHE784 SER785 GLN786 ARG787 ILE788 LEU789 GLU790 LEU791 GLN792 GLN793 SER794 GLY795 ASP796 MET797 ASP798 ILE799 LEU800 LYS801 HIS802 LYS803 TRP804 TRP805 PRO806 LYS807 ASN808 GLY809 GLN810 CYS811
Unit 3 ASP24 SER25 ILE26 ILE27 HIS28 ILE29 GLY30 ALA31 ILE32 PHE33 ASP34 GLU35 SER36 ALA37 LYS38 LYS39 ASP40 ASP41 GLU42 VAL43 PHE44 ARG45 THR46 ALA47 VAL48 GLY49 ASP50 LEU51 ASN52 GLN53 ASN54 GLU55 GLU56 ILE57 LEU58 GLN59 THR60 GLU61 LYS62 ILE63 THR64 PHE65 SER66 VAL67 THR68 PHE69 VAL70 ASP71 GLY72 ASN73 ASN74 PRO75 PHE76 GLN77 ALA78 VAL79 GLN80 GLU81 ALA82 CYS83 GLU84 LEU85 MET86 ASN87 GLN88 GLY89 ILE90 LEU91 ALA92 LEU93 VAL94 SER95 SER96 ILE97 GLY98 CYS99 THR100 SER101 ALA102 GLY103 SER104 LEU105 GLN106 SER107 LEU108 ALA109 ASP110 ALA111 MET112 HIS113 ILE114 PRO115 HIS116 LEU117 PHE118 ILE119 GLN120 ARG121 SER122 THR123 ALA124 GLY125 THR126 PRO127 ARG128 SER129 GLY130 CYS131 GLY132 LEU133 THR134 ARG135 SER136 ASN137 ARG138 ASN139 ASP140 ASP141 TYR142 THR143 LEU144 SER145 VAL146 ARG147 PRO148 PRO149 VAL150 TYR151 LEU152 ASN153 GLU154 VAL155 ILE156 LEU157 ARG158 VAL159 VAL160 THR161 GLU162 TYR163 ALA164 TRP165 GLN166 LYS167 PHE168 ILE169 ILE170 PHE171 TYR172 ASP173 SER174 GLU175 TYR176 ASP177 ILE178 ARG179 GLY180 ILE181 GLN182 GLU183 PHE184 LEU185 ASP186 LYS187 VAL188 SER189 GLN190 GLN191 GLY192 MET193 ASP194 VAL195 ALA196 LEU197 GLN198 LYS199 VAL200 GLU201 ASN202 ASN203 ILE204 ASN205 LYS206 MET207 ILE208 THR209 THR210 LEU211 PHE212 ASP213 THR214 MET215 ARG216 ILE217 GLU218 GLU219 LEU220 ASN221 ARG222 TYR223 ARG224 ASP225 THR226 LEU227 ARG228 ARG229 ALA230 ILE231 LEU232 VAL233 MET234 ASN235 PRO236 ALA237 THR238 ALA239 LYS240 SER241 PHE242 ILE243 SER244 GLU245 VAL246 VAL247 GLU248 THR249 ASN250 LEU251 VAL252 ALA253 PHE254 ASP255 CYS256 HIS257 TRP258 ILE259 ILE260 ILE261 ASN262 GLU263 GLU264 ILE265 ASN266 ASP267 VAL268 ASP269 VAL270 GLN271 GLU272 LEU273 VAL274 ARG275 ARG276 SER277 ILE278 GLY279 ARG280 LEU281 THR282 ILE283 ILE284 ARG285 GLN286 THR287 PHE288 PRO289 VAL290 PRO291 GLN292 ASN293 ILE294 SER295 GLN296 ARG297 CYS298 PHE299 ARG300 GLY301 ASN302 HIS303 ARG304 ILE305 SER306 SER307 THR308 LEU309 CYS310 ASP311 PRO312 LYS313 ASP314 PRO315 PHE316 ALA317 GLN318 ASN319 MET320 GLU321 ILE322 SER323 ASN324 LEU325 TYR326 ILE327 TYR328 ASP329 THR330 VAL331 LEU332 LEU333 LEU334 ALA335 ASN336 ALA337 PHE338 HIS339 LYS340 LYS341 LEU342 GLN343 ASP344 ARG345 LYS346 TRP347 HIS348 SER349 MET350 ALA351 SER352 LEU353 SER354 CYS355 ILE356 ARG357 LYS358 ASN359 SER360 LYS361 PRO362 TRP363 GLN364 GLY365 GLY366 ARG367 SER368 MET369 LEU370 GLU371 THR372 ILE373 LYS374 LYS375 GLY376 GLY377 VAL378 ASN379 GLY380 LEU381 THR382 GLY383 ASP384 LEU385 GLU386 PHE387 GLY388 GLU389 ASN390 GLY391 GLY392 ASN393 PRO394 ASN395 VAL396 HIS397 PHE398 GLU399 ILE400 LEU401 GLY402 THR403 GLY412 VAL413 ARG414 LYS415 LEU416 GLY417 CYS418 TRP419 ASN420 PRO421 VAL422 THR423 GLY424 LEU425 ASN426 GLY427 SER428 LEU429 GLY440 VAL441 VAL442 LEU443 ARG444 VAL445 VAL446 THR447 VAL448 LEU449 GLU450 GLU451 PRO452 PHE453 VAL454 MET455 VAL456 SER457 GLU458 ASN459 VAL460 LEU461 GLY462 LYS463 PRO464 LYS465 LYS466 TYR467 GLN468 GLY469 PHE470 SER471 ILE472 ASP473 VAL474 LEU475 ASP476 ALA477 LEU478 SER479 ASN480 TYR481 LEU482 GLY483 PHE484 ASN485 TYR486 GLU487 ILE488 TYR489 VAL490 ALA491 PRO492 ASP493 HIS494 LYS495 TYR496 GLY497 SER498 PRO499 GLN500 GLU501 ASP502 GLY503 THR504 TRP505 ASN506 GLY507 LEU508 VAL509 GLY510 GLU511 LEU512 VAL513 PHE514 LYS515 ARG516 ALA517 ASP518 ILE519 GLY520 ILE521 SER522 ALA523 LEU524 THR525 ILE526 THR527 PRO528 ASP529 ARG530 GLU531 ASN532 VAL533 VAL534 ASP535 PHE536 THR537 THR538 ARG539 TYR540 MET541 ASP542 TYR543 SER544 VAL545 GLY546 VAL547 LEU548 LEU549 ARG550 ARG551 SER664 ILE665 GLN666 SER667 LEU668 GLN669 ASP670 LEU671 SER672 LYS673 GLN674 THR675 ASP676 ILE677 PRO678 TYR679 GLY680 THR681 VAL682 LEU683 ASP684 SER685 ALA686 VAL687 TYR688 GLN689 HIS690 VAL691 ARG692 MET693 LYS694 GLY695 LEU696 ASN697 PRO698 SER703 MET704 TYR705 SER706 GLN707 MET708 TRP709 ARG710 MET711 ILE712 ASN713 ASN720 ASN721 VAL722 LEU723 GLU724 SER725 GLN726 ALA727 GLY728 ILE729 GLN730 LYS731 VAL732 LYS733 TYR734 GLY735 ASN736 TYR737 ALA738 PHE739 VAL740 TRP741 ASP742 ALA743 ALA744 VAL745 LEU746 GLU747 TYR748 VAL749 ALA750 ILE751 ASN752 ASP753 PRO754 ASP755 CYS756 SER757 PHE758 TYR759 THR760 VAL761 GLY762 ASN763 THR764 VAL765 ALA766 ASP767 ARG768 GLY769 TYR770 GLY771 ILE772 ALA773 LEU774 GLN775 HIS776 GLY777 SER778 PRO779 TYR780 ARG781 ASP782 VAL783 PHE784 SER785 GLN786 ARG787 ILE788 LEU789 GLU790 LEU791 GLN792 GLN793 SER794 GLY795 ASP796 MET797 ASP798 ILE799 LEU800 LYS801 HIS802 LYS803 TRP804 TRP805 PRO806 LYS807 ASN808 GLY809 GLN810 CYS811
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany