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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF PHOTINUS PYRALIS LUCIFERASE RED LIGHT EMITTING
Keywords ADENYLATION FORMING ENZYME, LIGASE, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5KYT     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LUCIFERIN 4-MONOOXYGENASE  A 532 4033 0
2  Protein   LUCIFERIN 4-MONOOXYGENASE  B 543 4171 0
3  Ligand   LUCIFERIN 4-MONOOXYGENASE  A 2 0 44
4  Ligand   LUCIFERIN 4-MONOOXYGENASE  B 6 0 60
5 Water     698 0 698
total       1781 8204 802

Proteins
Unit 1 ALA4 LYS5 ASN6 ILE7 LYS8 LYS9 GLY10 PRO11 ALA12 PRO13 PHE14 TYR15 PRO16 LEU17 GLU18 ASP19 GLY20 THR21 ALA22 GLY23 GLU24 GLN25 LEU26 HIS27 LYS28 ALA29 MET30 LYS31 ARG32 TYR33 ALA34 LEU35 VAL36 PRO37 GLY38 THR39 ILE40 ALA41 PHE42 THR43 ASP44 ALA45 HIS46 ILE47 GLU48 VAL49 ASN50 ILE51 THR52 TYR53 ALA54 GLU55 TYR56 PHE57 GLU58 MET59 SER60 VAL61 ARG62 LEU63 ALA64 GLU65 ALA66 MET67 LYS68 ARG69 TYR70 GLY71 LEU72 ASN73 THR74 ASN75 HIS76 ARG77 ILE78 VAL79 VAL80 CYS81 SER82 GLU83 ASN84 SER85 LEU86 GLN87 PHE88 PHE89 MET90 PRO91 VAL92 LEU93 GLY94 ALA95 LEU96 PHE97 ILE98 GLY99 VAL100 ALA101 VAL102 ALA103 PRO104 ALA105 ASN106 ASP107 ILE108 TYR109 ASN110 GLU111 ARG112 GLU113 LEU114 LEU115 ASN116 SER117 MET118 ASN119 ILE120 SER121 GLN122 PRO123 THR124 VAL125 VAL126 PHE127 VAL128 SER129 LYS130 LYS131 GLY132 LEU133 GLN134 LYS135 ILE136 LEU137 ASN138 VAL139 GLN140 LYS141 LYS142 LEU143 PRO144 ILE145 ILE146 GLN147 LYS148 ILE149 ILE150 ILE151 MET152 ASP153 SER154 LYS155 THR156 ASP157 TYR158 GLN159 GLY160 PHE161 GLN162 SER163 MET164 TYR165 THR166 PHE167 VAL168 THR169 SER170 HIS171 LEU172 PRO173 PRO174 GLY175 PHE176 ASN177 GLU178 TYR179 ASP180 PHE181 VAL182 PRO183 GLU184 SER185 PHE186 ASP187 ARG188 ASP189 LYS190 THR191 ILE192 ALA193 LEU194 ILE195 MET196 ASN197 SER198 SER199 GLY200 SER201 THR202 GLY203 LEU204 PRO205 LYS206 GLY207 VAL208 ALA209 LEU210 PRO211 HIS212 ARG213 THR214 ALA215 CYS216 VAL217 ARG218 PHE219 SER220 HIS221 ALA222 ARG223 ASP224 PRO225 ILE226 PHE227 GLY228 ASN229 GLN230 ILE231 ILE232 PRO233 ASP234 THR235 ALA236 ILE237 LEU238 SER239 VAL240 VAL241 PRO242 PHE243 HIS244 HIS245 GLY246 PHE247 GLY248 MET249 PHE250 THR251 THR252 LEU253 GLY254 TYR255 LEU256 ILE257 CYS258 GLY259 PHE260 ARG261 VAL262 VAL263 LEU264 MET265 TYR266 ARG267 PHE268 GLU269 GLU270 GLU271 LEU272 PHE273 LEU274 ARG275 SER276 LEU277 GLN278 ASP279 TYR280 LYS281 ILE282 GLN283 THR284 ALA285 LEU286 LEU287 VAL288 PRO289 THR290 LEU291 PHE292 SER293 PHE294 PHE295 ALA296 LYS297 SER298 THR299 LEU300 ILE301 ASP302 LYS303 TYR304 ASP305 LEU306 SER307 ASN308 LEU309 HIS310 GLU311 ILE312 ALA313 SER314 GLY315 GLY316 ALA317 PRO318 LEU319 SER320 LYS321 GLU322 VAL323 GLY324 GLU325 ALA326 VAL327 ALA328 LYS329 ARG330 PHE331 HIS332 LEU333 PRO334 GLY335 ILE336 ARG337 GLN338 GLY339 TYR340 GLY341 LEU342 THR343 GLU344 THR345 THR346 SER347 ALA348 ILE349 LEU350 ILE351 THR352 PRO353 GLU354 GLY355 ASP356 ASP357 LYS358 PRO359 GLY360 ALA361 VAL362 GLY363 LYS364 VAL365 VAL366 PRO367 PHE368 PHE369 GLU370 ALA371 LYS372 VAL373 VAL374 ASP375 LEU376 ASP377 THR378 GLY379 LYS380 THR381 LEU382 GLY383 VAL384 ASN385 GLN386 ARG387 GLY388 GLU389 LEU390 CYS391 VAL392 ARG393 GLY394 PRO395 MET396 ILE397 MET398 SER399 GLY400 TYR401 VAL402 ASN403 ASN404 PRO405 GLU406 ALA407 THR408 ASN409 ALA410 LEU411 ILE412 ASP413 LYS414 ASP415 GLY416 TRP417 LEU418 HIS419 SER420 GLY421 ASP422 ILE423 ALA424 TYR425 TRP426 ASP427 GLU428 ASP429 GLU430 HIS431 PHE432 PHE433 ILE434 VAL435 ASP436 ARG437 LEU438 LYS439 SER440 LEU441 ILE442 LYS443 TYR444 LYS445 GLY446 TYR447 GLN448 VAL449 ALA450 PRO451 ALA452 GLU453 LEU454 GLU455 SER456 ILE457 LEU458 LEU459 GLN460 HIS461 PRO462 PHE465 ASP466 ALA467 GLY468 VAL469 ALA470 GLY471 LEU472 PRO473 ASP474 ASP475 ASP476 ALA477 GLY478 GLU479 LEU480 PRO481 ALA482 ALA483 VAL484 VAL485 VAL486 LEU487 GLU488 GLU495 LYS496 GLU497 ILE498 VAL499 ASP500 TYR501 VAL502 ALA503 SER504 GLN505 VAL506 THR507 THR508 ALA509 LYS510 LYS511 LEU512 ARG513 GLY514 GLY515 VAL516 VAL517 PHE518 VAL519 ASP520 GLU521 VAL522 PRO523 LYS524 GLY525 LEU526 THR527 GLY528 LYS529 LEU530 ASP531 ALA532 ARG533 LYS534 ILE535 ARG536 GLU537 ILE538 LEU539 ILE540 LYS541 ALA542 LYS543
Unit 2 ALA4 LYS5 ASN6 ILE7 LYS8 LYS9 GLY10 PRO11 ALA12 PRO13 PHE14 TYR15 PRO16 LEU17 GLU18 ASP19 GLY20 THR21 ALA22 GLY23 GLU24 GLN25 LEU26 HIS27 LYS28 ALA29 MET30 LYS31 ARG32 TYR33 ALA34 LEU35 VAL36 PRO37 GLY38 THR39 ILE40 ALA41 PHE42 THR43 ASP44 ALA45 HIS46 ILE47 GLU48 VAL49 ASN50 ILE51 THR52 TYR53 ALA54 GLU55 TYR56 PHE57 GLU58 MET59 SER60 VAL61 ARG62 LEU63 ALA64 GLU65 ALA66 MET67 LYS68 ARG69 TYR70 GLY71 LEU72 ASN73 THR74 ASN75 HIS76 ARG77 ILE78 VAL79 VAL80 CYS81 SER82 GLU83 ASN84 SER85 LEU86 GLN87 PHE88 PHE89 MET90 PRO91 VAL92 LEU93 GLY94 ALA95 LEU96 PHE97 ILE98 GLY99 VAL100 ALA101 VAL102 ALA103 PRO104 ALA105 ASN106 ASP107 ILE108 TYR109 ASN110 GLU111 ARG112 GLU113 LEU114 LEU115 ASN116 SER117 MET118 ASN119 ILE120 SER121 GLN122 PRO123 THR124 VAL125 VAL126 PHE127 VAL128 SER129 LYS130 LYS131 GLY132 LEU133 GLN134 LYS135 ILE136 LEU137 ASN138 VAL139 GLN140 LYS141 LYS142 LEU143 PRO144 ILE145 ILE146 GLN147 LYS148 ILE149 ILE150 ILE151 MET152 ASP153 SER154 LYS155 THR156 ASP157 TYR158 GLN159 GLY160 PHE161 GLN162 SER163 MET164 TYR165 THR166 PHE167 VAL168 THR169 SER170 HIS171 LEU172 PRO173 PRO174 GLY175 PHE176 ASN177 GLU178 TYR179 ASP180 PHE181 VAL182 PRO183 GLU184 SER185 PHE186 ASP187 ARG188 ASP189 LYS190 THR191 ILE192 ALA193 LEU194 ILE195 MET196 ASN197 SER198 SER199 LEU204 PRO205 LYS206 GLY207 VAL208 ALA209 LEU210 PRO211 HIS212 ARG213 THR214 ALA215 CYS216 VAL217 ARG218 PHE219 SER220 HIS221 ALA222 ARG223 ASP224 PRO225 ILE226 PHE227 GLY228 ASN229 GLN230 ILE231 ILE232 PRO233 ASP234 THR235 ALA236 ILE237 LEU238 SER239 VAL240 VAL241 PRO242 PHE243 HIS244 HIS245 GLY246 PHE247 GLY248 MET249 PHE250 THR251 THR252 LEU253 GLY254 TYR255 LEU256 ILE257 CYS258 GLY259 PHE260 ARG261 VAL262 VAL263 LEU264 MET265 TYR266 ARG267 PHE268 GLU269 GLU270 GLU271 LEU272 PHE273 LEU274 ARG275 SER276 LEU277 GLN278 ASP279 TYR280 LYS281 ILE282 GLN283 THR284 ALA285 LEU286 LEU287 VAL288 PRO289 THR290 LEU291 PHE292 SER293 PHE294 PHE295 ALA296 LYS297 SER298 THR299 LEU300 ILE301 ASP302 LYS303 TYR304 ASP305 LEU306 SER307 ASN308 LEU309 HIS310 GLU311 ILE312 ALA313 SER314 GLY315 GLY316 ALA317 PRO318 LEU319 SER320 LYS321 GLU322 VAL323 GLY324 GLU325 ALA326 VAL327 ALA328 LYS329 ARG330 PHE331 HIS332 LEU333 PRO334 GLY335 ILE336 ARG337 GLN338 GLY339 TYR340 GLY341 LEU342 THR343 GLU344 THR345 THR346 SER347 ALA348 ILE349 LEU350 ILE351 THR352 PRO353 GLU354 GLY355 ASP356 ASP357 LYS358 PRO359 GLY360 ALA361 VAL362 GLY363 LYS364 VAL365 VAL366 PRO367 PHE368 PHE369 GLU370 ALA371 LYS372 VAL373 VAL374 ASP375 LEU376 ASP377 THR378 GLY379 LYS380 THR381 LEU382 GLY383 VAL384 ASN385 GLN386 ARG387 GLY388 GLU389 LEU390 CYS391 VAL392 ARG393 GLY394 PRO395 MET396 ILE397 MET398 SER399 GLY400 TYR401 VAL402 ASN403 ASN404 PRO405 GLU406 ALA407 THR408 ASN409 ALA410 LEU411 ILE412 ASP413 LYS414 ASP415 GLY416 TRP417 LEU418 HIS419 SER420 GLY421 ASP422 ILE423 ALA424 TYR425 TRP426 ASP427 GLU428 ASP429 GLU430 HIS431 PHE432 PHE433 ILE434 VAL435 ASP436 ARG437 LEU438 LYS439 SER440 LEU441 ILE442 LYS443 TYR444 LYS445 GLY446 TYR447 GLN448 VAL449 ALA450 PRO451 ALA452 GLU453 LEU454 GLU455 SER456 ILE457 LEU458 LEU459 GLN460 HIS461 PRO462 ASN463 ILE464 PHE465 ASP466 ALA467 GLY468 VAL469 ALA470 GLY471 LEU472 PRO473 ASP474 ASP475 ASP476 ALA477 GLY478 GLU479 LEU480 PRO481 ALA482 ALA483 VAL484 VAL485 VAL486 LEU487 GLU488 HIS489 GLY490 LYS491 THR492 MET493 THR494 GLU495 LYS496 GLU497 ILE498 VAL499 ASP500 TYR501 VAL502 ALA503 SER504 GLN505 VAL506 THR507 THR508 ALA509 LYS510 LYS511 LEU512 ARG513 GLY514 GLY515 VAL516 VAL517 PHE518 VAL519 ASP520 GLU521 VAL522 PRO523 LYS524 GLY525 LEU526 THR527 GLY528 LYS529 LEU530 ASP531 ALA532 ARG533 LYS534 ILE535 ARG536 GLU537 ILE538 LEU539 ILE540 LYS541 ALA542 LYS543 LYS544 GLY545 GLY546 LYS547 SER548 LYS549 LEU550

Ligands
Unit 3 SLU601 EDO602
Unit 4 SLU601 EDO602 EDO603 EDO604 EDO605 EDO606

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany