5KVH - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN APOPTOSIS-INDUCING FACTOR WITH W1 MUTATION
• Keywords: OXIDOREDUCTASE, FLAVOPROTEIN, MITOCHONDRIA, CELL DEATH
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5KVH	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL	A	438	6777	0
2	Protein	APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL	B	438	6672	0
3	Ligand	APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL	A	2	0	98
4	Ligand	APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL	B	1	0	83
5	Water			683	0	683
total				1562	13449	864

Proteins

Unit 1

ASP 126 LYS 127 ALA 128 PRO 129 SER 130 HIS 131 VAL 132 PRO 133 PHE 134 LEU 135 LEU 136 ILE 137 GLY 138 GLY 139 GLY 140 THR 141 ALA 142 ALA 143 PHE 144 ALA 145 ALA 146 ALA 147 ARG 148 SER 149 ILE 150 ARG 151 ALA 152 ARG 153 ASP 154 PRO 155 GLY 156 ALA 157 ARG 158 VAL 159 LEU 160 ILE 161 VAL 162 SER 163 GLU 164 ASP 165 PRO 166 GLU 167 LEU 168 PRO 169 TYR 170 MET 171 ARG 172 PRO 173 PRO 174 LEU 175 SER 176 LYS 177 GLU 178 LEU 179 TRP 180 PHE 181 SER 182 ASP 183 ASP 184 PRO 185 ASN 186 VAL 187 THR 188 LYS 189 THR 190 LEU 191 ARG 192 PHE 193 LYS 194 GLN 195 ALA 196 ASN 197 GLY 198 LYS 199 GLU 200 ARG 201 SER 202 ILE 203 TYR 204 PHE 205 GLN 206 PRO 207 PRO 208 SER 209 PHE 210 TYR 211 VAL 212 SER 213 ALA 214 GLN 215 ASP 216 LEU 217 PRO 218 HIS 219 ILE 220 GLU 221 ASN 222 GLY 223 GLY 224 VAL 225 ALA 226 VAL 227 LEU 228 THR 229 GLY 230 LYS 231 LYS 232 VAL 233 VAL 234 GLN 235 LEU 236 ASP 237 VAL 238 ARG 239 ASP 240 ASN 241 MET 242 VAL 243 LYS 244 LEU 245 ASN 246 ASP 247 GLY 248 SER 249 GLN 250 ILE 251 THR 252 TYR 253 GLU 254 LYS 255 CYS 256 LEU 257 ILE 258 ALA 259 THR 260 GLY 261 GLY 262 THR 263 PRO 264 ARG 265 SER 266 LEU 267 SER 268 ALA 269 ILE 270 ASP 271 ARG 272 ALA 273 GLY 274 ALA 275 GLU 276 VAL 277 LYS 278 SER 279 ARG 280 THR 281 THR 282 LEU 283 PHE 284 ARG 285 LYS 286 ILE 287 GLY 288 ASP 289 PHE 290 ARG 291 SER 292 LEU 293 GLU 294 LYS 295 ILE 296 SER 297 ARG 298 GLU 299 VAL 300 LYS 301 SER 302 ILE 303 THR 304 ILE 305 ILE 306 GLY 307 GLY 308 GLY 309 PHE 310 LEU 311 GLY 312 SER 313 GLU 314 LEU 315 ALA 316 CYS 317 ALA 318 LEU 319 GLY 320 ARG 321 LYS 322 ALA 323 ARG 324 ALA 325 LEU 326 GLY 327 THR 328 GLU 329 VAL 330 ILE 331 GLN 332 LEU 333 PHE 334 PRO 335 GLU 336 LYS 337 GLY 338 ASN 339 MET 340 GLY 341 LYS 342 ILE 343 LEU 344 PRO 345 GLU 346 TYR 347 LEU 348 SER 349 ASN 350 TRP 351 THR 352 MET 353 GLU 354 LYS 355 VAL 356 ARG 357 ARG 358 GLU 359 GLY 360 VAL 361 LYS 362 VAL 363 MET 364 PRO 365 ASN 366 ALA 367 ILE 368 VAL 369 GLN 370 SER 371 VAL 372 GLY 373 VAL 374 SER 375 SER 376 GLY 377 LYS 378 LEU 379 LEU 380 ILE 381 LYS 382 LEU 383 LYS 384 ASP 385 GLY 386 ARG 387 LYS 388 VAL 389 GLU 390 THR 391 ASP 392 HIS 393 ILE 394 VAL 395 ALA 396 ALA 397 VAL 398 GLY 399 LEU 400 GLU 401 PRO 402 ASN 403 VAL 404 GLU 405 LEU 406 ALA 407 LYS 408 THR 409 GLY 410 GLY 411 LEU 412 GLU 413 ILE 414 ASP 415 SER 416 ASP 417 PHE 418 GLY 419 GLY 420 PHE 421 ARG 422 VAL 423 ASN 424 ALA 425 GLU 426 LEU 427 GLN 428 ALA 429 ARG 430 SER 431 ASN 432 ILE 433 TRP 434 VAL 435 ALA 436 GLY 437 ASP 438 ALA 439 ALA 440 CYS 441 PHE 442 TYR 443 ASP 444 ILE 445 LYS 446 LEU 447 GLY 448 ARG 449 ARG 450 ARG 451 VAL 452 GLU 453 HIS 454 HIS 455 ASP 456 HIS 457 ALA 458 VAL 459 VAL 460 SER 461 GLY 462 ARG 463 LEU 464 ALA 465 GLY 466 GLU 467 ASN 468 MET 469 THR 470 GLY 471 ALA 472 ALA 473 LYS 474 PRO 475 TYR 476 TRP 477 HIS 478 GLN 479 SER 480 MET 481 PHE 482 TRP 483 SER 484 ASP 485 LEU 486 GLY 487 PRO 488 ASP 489 VAL 490 GLY 491 TYR 492 GLU 493 ALA 494 ILE 495 GLY 496 LEU 497 VAL 498 ASP 499 SER 500 SER 501 LEU 502 PRO 503 THR 504 VAL 505 GLY 506 VAL 507 PHE 508 ALA 509 LYS 510 TYR 560 GLY 561 LYS 562 GLY 563 VAL 564 ILE 565 PHE 566 TYR 567 LEU 568 ARG 569 ASP 570 LYS 571 VAL 572 VAL 573 VAL 574 GLY 575 ILE 576 VAL 577 LEU 578 TRP 579 ASN 580 ILE 581 PHE 582 ASN 583 ARG 584 MET 585 PRO 586 ILE 587 ALA 588 ARG 589 LYS 590 ILE 591 ILE 592 LYS 593 ASP 594 GLY 595 GLU 596 GLN 597 HIS 598 GLU 599 ASP 600 LEU 601 ASN 602 GLU 603 VAL 604 ALA 605 LYS 606 LEU 607 PHE 608 ASN 609 ILE 610 HIS 611 GLU 612

Unit 2

ASP 126 LYS 127 ALA 128 PRO 129 SER 130 HIS 131 VAL 132 PRO 133 PHE 134 LEU 135 LEU 136 ILE 137 GLY 138 GLY 139 GLY 140 THR 141 ALA 142 ALA 143 PHE 144 ALA 145 ALA 146 ALA 147 ARG 148 SER 149 ILE 150 ARG 151 ALA 152 ARG 153 ASP 154 PRO 155 GLY 156 ALA 157 ARG 158 VAL 159 LEU 160 ILE 161 VAL 162 SER 163 GLU 164 ASP 165 PRO 166 GLU 167 LEU 168 PRO 169 TYR 170 MET 171 ARG 172 PRO 173 PRO 174 LEU 175 SER 176 LYS 177 GLU 178 LEU 179 TRP 180 PHE 181 SER 182 ASP 183 ASP 184 PRO 185 ASN 186 VAL 187 THR 188 LYS 189 THR 190 LEU 191 ARG 192 PHE 193 LYS 194 GLN 195 ALA 196 ASN 197 GLY 198 LYS 199 GLU 200 ARG 201 SER 202 ILE 203 TYR 204 PHE 205 GLN 206 PRO 207 PRO 208 SER 209 PHE 210 TYR 211 VAL 212 SER 213 ALA 214 GLN 215 ASP 216 LEU 217 PRO 218 HIS 219 ILE 220 GLU 221 ASN 222 GLY 223 GLY 224 VAL 225 ALA 226 VAL 227 LEU 228 THR 229 GLY 230 LYS 231 LYS 232 VAL 233 VAL 234 GLN 235 LEU 236 ASP 237 VAL 238 ARG 239 ASP 240 ASN 241 MET 242 VAL 243 LYS 244 LEU 245 ASN 246 ASP 247 GLY 248 SER 249 GLN 250 ILE 251 THR 252 TYR 253 GLU 254 LYS 255 CYS 256 LEU 257 ILE 258 ALA 259 THR 260 GLY 261 GLY 262 THR 263 PRO 264 ARG 265 SER 266 LEU 267 SER 268 ALA 269 ILE 270 ASP 271 ARG 272 ALA 273 GLY 274 ALA 275 GLU 276 VAL 277 LYS 278 SER 279 ARG 280 THR 281 THR 282 LEU 283 PHE 284 ARG 285 LYS 286 ILE 287 GLY 288 ASP 289 PHE 290 ARG 291 SER 292 LEU 293 GLU 294 LYS 295 ILE 296 SER 297 ARG 298 GLU 299 VAL 300 LYS 301 SER 302 ILE 303 THR 304 ILE 305 ILE 306 GLY 307 GLY 308 GLY 309 PHE 310 LEU 311 GLY 312 SER 313 GLU 314 LEU 315 ALA 316 CYS 317 ALA 318 LEU 319 GLY 320 ARG 321 LYS 322 ALA 323 ARG 324 ALA 325 LEU 326 GLY 327 THR 328 GLU 329 VAL 330 ILE 331 GLN 332 LEU 333 PHE 334 PRO 335 GLU 336 LYS 337 GLY 338 ASN 339 MET 340 GLY 341 LYS 342 ILE 343 LEU 344 PRO 345 GLU 346 TYR 347 LEU 348 SER 349 ASN 350 TRP 351 THR 352 MET 353 GLU 354 LYS 355 VAL 356 ARG 357 ARG 358 GLU 359 GLY 360 VAL 361 LYS 362 VAL 363 MET 364 PRO 365 ASN 366 ALA 367 ILE 368 VAL 369 GLN 370 SER 371 VAL 372 GLY 373 VAL 374 SER 375 SER 376 GLY 377 LYS 378 LEU 379 LEU 380 ILE 381 LYS 382 LEU 383 LYS 384 ASP 385 GLY 386 ARG 387 LYS 388 VAL 389 GLU 390 THR 391 ASP 392 HIS 393 ILE 394 VAL 395 ALA 396 ALA 397 VAL 398 GLY 399 LEU 400 GLU 401 PRO 402 ASN 403 VAL 404 GLU 405 LEU 406 ALA 407 LYS 408 THR 409 GLY 410 GLY 411 LEU 412 GLU 413 ILE 414 ASP 415 SER 416 ASP 417 PHE 418 GLY 419 GLY 420 PHE 421 ARG 422 VAL 423 ASN 424 ALA 425 GLU 426 LEU 427 GLN 428 ALA 429 ARG 430 SER 431 ASN 432 ILE 433 TRP 434 VAL 435 ALA 436 GLY 437 ASP 438 ALA 439 ALA 440 CYS 441 PHE 442 TYR 443 ASP 444 ILE 445 LYS 446 LEU 447 GLY 448 ARG 449 ARG 450 ARG 451 VAL 452 GLU 453 HIS 454 HIS 455 ASP 456 HIS 457 ALA 458 VAL 459 VAL 460 SER 461 GLY 462 ARG 463 LEU 464 ALA 465 GLY 466 GLU 467 ASN 468 MET 469 THR 470 GLY 471 ALA 472 ALA 473 LYS 474 PRO 475 TYR 476 TRP 477 HIS 478 GLN 479 SER 480 MET 481 PHE 482 TRP 483 SER 484 ASP 485 LEU 486 GLY 487 PRO 488 ASP 489 VAL 490 GLY 491 TYR 492 GLU 493 ALA 494 ILE 495 GLY 496 LEU 497 VAL 498 ASP 499 SER 500 SER 501 LEU 502 PRO 503 THR 504 VAL 505 GLY 506 VAL 507 PHE 508 ALA 509 LYS 510 TYR 560 GLY 561 LYS 562 GLY 563 VAL 564 ILE 565 PHE 566 TYR 567 LEU 568 ARG 569 ASP 570 LYS 571 VAL 572 VAL 573 VAL 574 GLY 575 ILE 576 VAL 577 LEU 578 TRP 579 ASN 580 ILE 581 PHE 582 ASN 583 ARG 584 MET 585 PRO 586 ILE 587 ALA 588 ARG 589 LYS 590 ILE 591 ILE 592 LYS 593 ASP 594 GLY 595 GLU 596 GLN 597 HIS 598 GLU 599 ASP 600 LEU 601 ASN 602 GLU 603 VAL 604 ALA 605 LYS 606 LEU 607 PHE 608 ASN 609 ILE 610 HIS 611 GLU 612

Ligands

Unit 3	FAD 701 GOL 702
Unit 4	FAD 701