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Sequence, Chains, Asymmetric and Biological Units

Title RNA 15MER DUPLEX BINDING WITH PZG MONOMER
Keywords RNA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5KRG     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 15 235 87
2  RNA    B 15 235 87
3  RNA    C 15 235 87
4  RNA    D 15 235 87
5  Ligand   RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG) P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')  A 2 0 58
6  Ligand   RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG) P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')  C 1 0 29
7  Ligand   RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG) P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')  D 1 0 29
8 Water     92 0 92
total       156 940 556
Nucleic acids
Unit 1 LCC1 LCC2 LCC3 LCG4 A5 C6 U7 U8 A9 A10 G11 U12 C13 G14 G15
Unit 2 LCC1 LCC2 LCC3 LCG4 A5 C6 U7 U8 A9 A10 G11 U12 C13 G14 G15
Unit 3 LCC1 LCC2 LCC3 LCG4 A5 C6 U7 U8 A9 A10 G11 U12 C13 G14 G15
Unit 4 LCC1 LCC2 LCC3 LCG4 A5 C6 U7 U8 A9 A10 G11 U12 C13 G14 G15
Ligands
Unit 5 PZG101 PZG102
Unit 6 PZG101
Unit 7 PZG101
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany