5KN5 - Sequence, Chains, Asymmetric and Biological Units

• Title: TGFALPHA/EPIREGULIN COMPLEX WITH NEUTRALIZING ANTIBODY LY301
• Keywords: TGFALPHA EPIREGULIN ANTIBODY FAB, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5KN5	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	EPIREGULIN ANTIBODY LY3016859 FAB HEAVY CHAIN	A	214	1594	0
2	Protein	EPIREGULIN ANTIBODY LY3016859 FAB LIGHT CHAIN	B	216	1656	0
3	Protein	PROTRANSFORMING GROWTH FACTOR ALPHA	C	40	302	0
4	Protein	EPIREGULIN ANTIBODY LY3016859 FAB HEAVY CHAIN	D	215	1612	0
5	Protein	EPIREGULIN ANTIBODY LY3016859 FAB LIGHT CHAIN	E	216	1661	0
6	Protein	PROTRANSFORMING GROWTH FACTOR ALPHA	F	39	303	0
7	Ligand	EPIREGULIN ANTIBODY LY3016859 FAB HEAVY CHAIN	A	1	0	5
8	Ligand	PROTRANSFORMING GROWTH FACTOR ALPHA	C	1	0	1
9	Water			150	0	150
total				1092	7128	156

Proteins

Unit 1	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 ASP 31 ALA 32 TYR 33 ILE 34 ASN 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 TRP 50 ILE 51 TRP 52 PRO 53 GLY 54 PRO 55 VAL 56 ILE 57 THR 58 TYR 59 TYR 60 ASN 61 PRO 62 LYS 63 PHE 64 LYS 65 GLY 66 ARG 67 VAL 68 THR 69 ILE 70 THR 71 ALA 72 ASP 73 LYS 74 SER 75 THR 76 SER 77 THR 78 ALA 79 TYR 80 MET 81 GLU 82 LEU 83 SER 84 SER 85 LEU 86 ARG 87 SER 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 ARG 99 GLU 100 VAL 101 LEU 102 SER 103 PRO 104 PHE 105 ALA 106 TYR 107 TRP 108 GLY 109 GLN 110 GLY 111 THR 112 THR 113 VAL 114 THR 115 VAL 116 SER 117 SER 118 ALA 119 SER 120 THR 121 LYS 122 GLY 123 PRO 124 SER 125 VAL 126 PHE 127 PRO 128 LEU 129 ALA 130 PRO 131 CYS 132 SER 133 SER 137 GLU 138 SER 139 THR 140 ALA 141 ALA 142 LEU 143 GLY 144 CYS 145 LEU 146 VAL 147 LYS 148 ASP 149 TYR 150 PHE 151 PRO 152 GLU 153 PRO 154 VAL 155 THR 156 VAL 157 SER 158 TRP 159 ASN 160 SER 161 GLY 162 ALA 163 LEU 164 THR 165 SER 166 GLY 167 VAL 168 HIS 169 THR 170 PHE 171 PRO 172 ALA 173 VAL 174 LEU 175 GLN 176 SER 177 SER 178 GLY 179 LEU 180 TYR 181 SER 182 LEU 183 SER 184 SER 185 VAL 186 VAL 187 THR 188 VAL 189 PRO 190 SER 191 SER 192 SER 193 LEU 194 GLY 195 THR 196 LYS 197 THR 198 TYR 199 THR 200 CYS 201 ASN 202 VAL 203 ASP 204 HIS 205 LYS 206 PRO 207 SER 208 ASN 209 THR 210 LYS 211 VAL 212 ASP 213 LYS 214 ARG 215 VAL 216 GLU 217
Unit 2	ASP 1 ILE 2 VAL 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 ASP 9 SER 10 LEU 11 ALA 12 VAL 13 SER 14 LEU 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 ILE 21 ASN 22 CYS 23 ARG 24 SER 25 SER 26 GLN 27 SER 28 ILE 29 VAL 30 HIS 31 SER 32 THR 33 GLY 34 ASN 35 THR 36 TYR 37 LEU 38 GLU 39 TRP 40 TYR 41 GLN 42 GLN 43 LYS 44 PRO 45 GLY 46 GLN 47 PRO 48 PRO 49 LYS 50 LEU 51 LEU 52 ILE 53 TYR 54 LYS 55 VAL 56 SER 57 ASN 58 ARG 59 PHE 60 SER 61 GLY 62 VAL 63 PRO 64 ASP 65 ARG 66 PHE 67 SER 68 GLY 69 SER 70 GLY 71 SER 72 GLY 73 THR 74 ASP 75 PHE 76 THR 77 LEU 78 THR 79 ILE 80 SER 81 SER 82 LEU 83 GLN 84 ALA 85 GLU 86 ASP 87 VAL 88 ALA 89 VAL 90 TYR 91 TYR 92 CYS 93 PHE 94 HIS 95 GLY 96 THR 97 HIS 98 VAL 99 PRO 100 TYR 101 THR 102 PHE 103 GLY 104 GLY 105 GLY 106 THR 107 LYS 108 VAL 109 GLU 110 ILE 111 LYS 112 ARG 113 THR 114 VAL 115 ALA 116 ALA 117 PRO 118 SER 119 VAL 120 PHE 121 ILE 122 PHE 123 PRO 124 PRO 125 SER 126 ASP 127 GLU 128 GLN 129 LEU 130 LYS 131 SER 132 GLY 133 THR 134 ALA 135 SER 136 VAL 137 VAL 138 CYS 139 LEU 140 LEU 141 ASN 142 ASN 143 PHE 144 TYR 145 PRO 146 ARG 147 GLU 148 ALA 149 LYS 150 VAL 151 GLN 152 TRP 153 LYS 154 VAL 155 ASP 156 ASN 157 ALA 158 LEU 159 GLN 160 SER 161 GLY 162 ASN 163 SER 164 GLN 165 GLU 166 SER 167 VAL 168 THR 169 GLU 170 GLN 171 ASP 172 SER 173 LYS 174 ASP 175 SER 176 THR 177 TYR 178 SER 179 LEU 180 SER 181 SER 182 THR 183 LEU 184 THR 185 LEU 186 SER 187 LYS 188 ALA 189 ASP 190 TYR 191 GLU 192 LYS 193 HIS 194 LYS 195 VAL 196 TYR 197 ALA 198 CYS 199 GLU 200 VAL 201 THR 202 HIS 203 GLN 204 GLY 205 LEU 206 SER 207 SER 208 PRO 209 VAL 210 THR 211 LYS 212 SER 213 PHE 214 ASN 215 ARG 216
Unit 3	ASP 10 SER 11 HIS 12 THR 13 GLN 14 PHE 15 CYS 16 PHE 17 HIS 18 GLY 19 THR 20 CYS 21 ARG 22 PHE 23 LEU 24 VAL 25 GLN 26 GLU 27 ASP 28 LYS 29 PRO 30 ALA 31 CYS 32 VAL 33 CYS 34 HIS 35 SER 36 GLY 37 TYR 38 VAL 39 GLY 40 ALA 41 ARG 42 CYS 43 GLU 44 HIS 45 ALA 46 ASP 47 LEU 48 LEU 49
Unit 4	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 ASP 31 ALA 32 TYR 33 ILE 34 ASN 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 TRP 50 ILE 51 TRP 52 PRO 53 GLY 54 PRO 55 VAL 56 ILE 57 THR 58 TYR 59 TYR 60 ASN 61 PRO 62 LYS 63 PHE 64 LYS 65 GLY 66 ARG 67 VAL 68 THR 69 ILE 70 THR 71 ALA 72 ASP 73 LYS 74 SER 75 THR 76 SER 77 THR 78 ALA 79 TYR 80 MET 81 GLU 82 LEU 83 SER 84 SER 85 LEU 86 ARG 87 SER 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 ARG 99 GLU 100 VAL 101 LEU 102 SER 103 PRO 104 PHE 105 ALA 106 TYR 107 TRP 108 GLY 109 GLN 110 GLY 111 THR 112 THR 113 VAL 114 THR 115 VAL 116 SER 117 SER 118 ALA 119 SER 120 THR 121 LYS 122 GLY 123 PRO 124 SER 125 VAL 126 PHE 127 PRO 128 LEU 129 ALA 130 PRO 131 CYS 132 SER 135 THR 136 SER 137 GLU 138 SER 139 THR 140 ALA 141 ALA 142 LEU 143 GLY 144 CYS 145 LEU 146 VAL 147 LYS 148 ASP 149 TYR 150 PHE 151 PRO 152 GLU 153 PRO 154 VAL 155 THR 156 VAL 157 SER 158 TRP 159 ASN 160 SER 161 GLY 162 ALA 163 LEU 164 THR 165 SER 166 GLY 167 VAL 168 HIS 169 THR 170 PHE 171 PRO 172 ALA 173 VAL 174 LEU 175 GLN 176 SER 177 SER 178 GLY 179 LEU 180 TYR 181 SER 182 LEU 183 SER 184 SER 185 VAL 186 VAL 187 THR 188 VAL 189 PRO 190 SER 191 SER 192 SER 193 LEU 194 GLY 195 THR 196 LYS 197 THR 198 TYR 199 THR 200 CYS 201 ASN 202 VAL 203 ASP 204 HIS 205 LYS 206 PRO 207 SER 208 ASN 209 THR 210 LYS 211 VAL 212 ASP 213 LYS 214 ARG 215 VAL 216 GLU 217
Unit 5	ASP 1 ILE 2 VAL 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 ASP 9 SER 10 LEU 11 ALA 12 VAL 13 SER 14 LEU 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 ILE 21 ASN 22 CYS 23 ARG 24 SER 25 SER 26 GLN 27 SER 28 ILE 29 VAL 30 HIS 31 SER 32 THR 33 GLY 34 ASN 35 THR 36 TYR 37 LEU 38 GLU 39 TRP 40 TYR 41 GLN 42 GLN 43 LYS 44 PRO 45 GLY 46 GLN 47 PRO 48 PRO 49 LYS 50 LEU 51 LEU 52 ILE 53 TYR 54 LYS 55 VAL 56 SER 57 ASN 58 ARG 59 PHE 60 SER 61 GLY 62 VAL 63 PRO 64 ASP 65 ARG 66 PHE 67 SER 68 GLY 69 SER 70 GLY 71 SER 72 GLY 73 THR 74 ASP 75 PHE 76 THR 77 LEU 78 THR 79 ILE 80 SER 81 SER 82 LEU 83 GLN 84 ALA 85 GLU 86 ASP 87 VAL 88 ALA 89 VAL 90 TYR 91 TYR 92 CYS 93 PHE 94 HIS 95 GLY 96 THR 97 HIS 98 VAL 99 PRO 100 TYR 101 THR 102 PHE 103 GLY 104 GLY 105 GLY 106 THR 107 LYS 108 VAL 109 GLU 110 ILE 111 LYS 112 ARG 113 THR 114 VAL 115 ALA 116 ALA 117 PRO 118 SER 119 VAL 120 PHE 121 ILE 122 PHE 123 PRO 124 PRO 125 SER 126 ASP 127 GLU 128 GLN 129 LEU 130 LYS 131 SER 132 GLY 133 THR 134 ALA 135 SER 136 VAL 137 VAL 138 CYS 139 LEU 140 LEU 141 ASN 142 ASN 143 PHE 144 TYR 145 PRO 146 ARG 147 GLU 148 ALA 149 LYS 150 VAL 151 GLN 152 TRP 153 LYS 154 VAL 155 ASP 156 ASN 157 ALA 158 LEU 159 GLN 160 SER 161 GLY 162 ASN 163 SER 164 GLN 165 GLU 166 SER 167 VAL 168 THR 169 GLU 170 GLN 171 ASP 172 SER 173 LYS 174 ASP 175 SER 176 THR 177 TYR 178 SER 179 LEU 180 SER 181 SER 182 THR 183 LEU 184 THR 185 LEU 186 SER 187 LYS 188 ALA 189 ASP 190 TYR 191 GLU 192 LYS 193 HIS 194 LYS 195 VAL 196 TYR 197 ALA 198 CYS 199 GLU 200 VAL 201 THR 202 HIS 203 GLN 204 GLY 205 LEU 206 SER 207 SER 208 PRO 209 VAL 210 THR 211 LYS 212 SER 213 PHE 214 ASN 215 ARG 216
Unit 6	SER 11 HIS 12 THR 13 GLN 14 PHE 15 CYS 16 PHE 17 HIS 18 GLY 19 THR 20 CYS 21 ARG 22 PHE 23 LEU 24 VAL 25 GLN 26 GLU 27 ASP 28 LYS 29 PRO 30 ALA 31 CYS 32 VAL 33 CYS 34 HIS 35 SER 36 GLY 37 TYR 38 VAL 39 GLY 40 ALA 41 ARG 42 CYS 43 GLU 44 HIS 45 ALA 46 ASP 47 LEU 48 LEU 49

Ligands

Unit 7	SO4 301
Unit 8	ZN 101