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| Title | HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF3-7 AND DNA COMP STRUCTURE | |
| Keywords | CTCF, ZINC FINGER, TRANSCRIPTION-DNA COMPLEX | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 5KKQ | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | TRANSCRIPTIONAL REPRESSOR CTCF | A | 147 | 2358 | 0 |
| 2 | Other macromolecule | DNA (5'- D(*TP*AP*GP*CP*GP*CP*CP*CP*CP*CP*TP*GP*CP*TP*GP*GP*C)-3') | B | 17 | 532 | 0 |
| 3 | Other macromolecule | DNA (5'- D(*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*GP*GP*CP*GP*CP*TP*A)-3') | C | 17 | 541 | 0 |
| 4 | Protein | TRANSCRIPTIONAL REPRESSOR CTCF | D | 145 | 2341 | 0 |
| 5 | Other macromolecule | DNA (5'- D(*TP*AP*GP*CP*GP*CP*CP*CP*CP*CP*TP*GP*CP*TP*GP*GP*C)-3') | E | 17 | 532 | 0 |
| 6 | Other macromolecule | DNA (5'- D(*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*GP*GP*CP*GP*CP*TP*A)-3') | F | 17 | 541 | 0 |
| 7 | Ligand | TRANSCRIPTIONAL REPRESSOR CTCF | A | 5 | 0 | 5 |
| 8 | Ligand | TRANSCRIPTIONAL REPRESSOR CTCF | D | 5 | 0 | 5 |
| 9 | Water | 327 | 0 | 327 | ||
| total | 697 | 6845 | 337 |
| Unit 1 | PRO317 LEU318 GLY319 SER320 PRO321 HIS322 LYS323 CYS324 PRO325 ASP326 CYS327 ASP328 MET329 ALA330 PHE331 VAL332 THR333 SER334 GLY335 GLU336 LEU337 VAL338 ARG339 HIS340 ARG341 ARG342 TYR343 LYS344 HIS345 THR346 HIS347 GLU348 LYS349 PRO350 PHE351 LYS352 CYS353 SER354 MET355 CYS356 ASP357 TYR358 ALA359 SER360 VAL361 GLU362 VAL363 SER364 LYS365 LEU366 LYS367 ARG368 HIS369 ILE370 ARG371 SER372 HIS373 THR374 GLY375 GLU376 ARG377 PRO378 PHE379 GLN380 CYS381 SER382 LEU383 CYS384 SER385 TYR386 ALA387 SER388 ARG389 ASP390 THR391 TYR392 LYS393 LEU394 LYS395 ARG396 HIS397 MET398 ARG399 THR400 HIS401 SER402 GLY403 GLU404 LYS405 PRO406 TYR407 GLU408 CYS409 TYR410 ILE411 CYS412 HIS413 ALA414 ARG415 PHE416 THR417 GLN418 SER419 GLY420 THR421 MET422 LYS423 MET424 HIS425 ILE426 LEU427 GLN428 LYS429 HIS430 THR431 GLU432 ASN433 VAL434 ALA435 LYS436 PHE437 HIS438 CYS439 PRO440 HIS441 CYS442 ASP443 THR444 VAL445 ILE446 ALA447 ARG448 LYS449 SER450 ASP451 LEU452 GLY453 VAL454 HIS455 LEU456 ARG457 LYS458 GLN459 HIS460 SER461 TYR462 ILE463 |
| Unit 4 | PRO321 HIS322 LYS323 CYS324 PRO325 ASP326 CYS327 ASP328 MET329 ALA330 PHE331 VAL332 THR333 SER334 GLY335 GLU336 LEU337 VAL338 ARG339 HIS340 ARG341 ARG342 TYR343 LYS344 HIS345 THR346 HIS347 GLU348 LYS349 PRO350 PHE351 LYS352 CYS353 SER354 MET355 CYS356 ASP357 TYR358 ALA359 SER360 VAL361 GLU362 VAL363 SER364 LYS365 LEU366 LYS367 ARG368 HIS369 ILE370 ARG371 SER372 HIS373 THR374 GLY375 GLU376 ARG377 PRO378 PHE379 GLN380 CYS381 SER382 LEU383 CYS384 SER385 TYR386 ALA387 SER388 ARG389 ASP390 THR391 TYR392 LYS393 LEU394 LYS395 ARG396 HIS397 MET398 ARG399 THR400 HIS401 SER402 GLY403 GLU404 LYS405 PRO406 TYR407 GLU408 CYS409 TYR410 ILE411 CYS412 HIS413 ALA414 ARG415 PHE416 THR417 GLN418 SER419 GLY420 THR421 MET422 LYS423 MET424 HIS425 ILE426 LEU427 GLN428 LYS429 HIS430 THR431 GLU432 ASN433 VAL434 ALA435 LYS436 PHE437 HIS438 CYS439 PRO440 HIS441 CYS442 ASP443 THR444 VAL445 ILE446 ALA447 ARG448 LYS449 SER450 ASP451 LEU452 GLY453 VAL454 HIS455 LEU456 ARG457 LYS458 GLN459 HIS460 SER461 TYR462 ILE463 GLU464 GLN465 |
| Unit 2 | DT1 DA2 DG3 DC4 DG5 DC6 DC7 DC8 DC9 DC10 DT11 DG12 DC13 DT14 DG15 DG16 DC17 |
| Unit 3 | DG1 DC2 DC3 DA4 DG5 DC6 DA7 DG8 DG9 DG10 DG11 DG12 DC13 DG14 DC15 DT16 DA17 |
| Unit 5 | DT1 DA2 DG3 DC4 DG5 DC6 DC7 DC8 DC9 DC10 DT11 DG12 DC13 DT14 DG15 DG16 DC17 |
| Unit 6 | DG1 DC2 DC3 DA4 DG5 DC6 DA7 DG8 DG9 DG10 DG11 DG12 DC13 DG14 DC15 DT16 DA17 |
| Unit 7 | ZN501 ZN502 ZN503 ZN504 ZN505 |
| Unit 8 | ZN501 ZN502 ZN503 ZN504 ZN505 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |