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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AN ACTIVE POLYCOMB REPRESSIVE COMPLEX 2 STIMULATED STATE
Keywords COMPLEX, METHYLTRANSFERASE, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5KJH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PUTATIVE POLYCOMB PROTEIN EED  A 481 3782 0
2  Protein   PUTATIVE UNCHARACTERIZED PROTEIN,ZINC FINGER DOMA CONTAINING PROTEIN  B 807 6498 0
3  Protein   PEPTIDE H3K27ME3  D 8 48 12
4  Ligand   PUTATIVE UNCHARACTERIZED PROTEIN,ZINC FINGER DOMA CONTAINING PROTEIN  B 9 0 34
5 Water     528 0 528
total       1833 10328 574
Proteins
Unit 1 SER6 ALA7 GLU8 TRP9 GLU10 LEU11 PRO12 ARG13 LEU14 ARG15 THR16 SER17 PHE18 ILE19 PHE20 GLN21 ASP22 ASP23 TYR24 LYS25 TYR26 LEU27 GLN35 ASP36 LEU37 ALA38 GLU39 PHE40 PHE41 ASP42 VAL43 LYS44 PHE45 TYR46 PRO47 TYR48 SER49 PRO50 PRO51 GLY52 ALA53 PRO54 PRO55 VAL56 PHE57 ALA58 ALA59 THR60 SER61 LYS62 LYS63 HIS64 ALA65 VAL66 ILE67 CYS68 ARG69 LEU70 THR71 GLN72 THR73 THR74 ASP75 LYS76 ASP77 ALA78 ASN79 PRO80 CYS81 GLU82 ILE83 ILE84 GLN85 LEU86 ILE87 ARG88 ASP89 ASP90 GLY91 ASN92 GLU93 ALA94 ASN95 CYS96 ALA97 SER98 CYS99 TRP100 SER101 LYS102 ASP103 PRO104 ILE105 THR106 ASP107 GLN108 PRO109 LEU110 LEU111 CYS112 ILE113 ALA114 GLY115 ASN116 GLU117 GLY118 ASN119 VAL120 LYS121 VAL122 TYR123 ASN124 VAL125 THR126 GLU127 GLY128 LYS129 LEU130 TYR131 ARG132 THR133 LEU134 VAL135 GLY136 HIS137 GLY138 GLY139 GLY140 ILE141 ASN142 ASP143 LEU144 ALA145 THR146 SER147 PRO148 ALA149 ASN150 PRO151 TYR152 ILE153 ILE154 ALA155 SER156 ALA157 SER158 ASP159 ASP160 THR161 THR162 ILE163 ARG164 ILE165 TRP166 SER167 LEU168 ALA169 PRO170 GLU171 HIS172 GLU173 LYS174 GLN175 PRO176 CYS177 VAL178 CYS179 ILE180 LEU181 GLY182 GLY183 GLU184 GLY185 HIS186 SER187 TYR188 ASP189 LEU190 LEU191 SER192 VAL193 ALA194 PHE195 HIS196 ASP197 ASN198 GLY199 ARG200 TYR201 VAL202 LEU203 SER204 ALA205 GLY206 HIS207 ASP208 GLN209 VAL210 ILE211 ASN212 LEU213 TRP214 ALA215 LEU216 PRO217 GLU218 PHE219 PRO220 ASN221 GLU222 HIS223 MET224 GLU225 ILE226 PRO227 ILE228 VAL229 ILE230 TYR231 TYR232 PRO233 HIS234 PHE235 SER236 SER237 SER238 GLU239 ILE240 HIS241 ASN242 ASN243 LEU244 VAL245 ASP246 CYS247 VAL248 ALA249 PHE250 TYR251 GLY252 ASP253 LEU254 ILE255 LEU256 SER257 ARG258 ALA259 CYS260 HIS261 GLU262 ASP263 THR264 ILE265 VAL266 LEU267 TRP268 ARG269 ILE270 GLU271 GLY272 PHE273 SER274 SER275 ASP276 ASP277 PRO278 ILE279 PRO280 GLY281 PRO282 LEU283 ASP284 ALA285 PRO286 THR287 PRO288 THR289 ASP290 MET291 THR292 LYS293 GLN294 THR295 ARG296 SER297 TYR298 PHE299 THR300 PRO301 THR302 VAL303 SER304 PRO305 GLN306 SER307 ARG308 PRO309 ALA310 MET311 PHE312 THR313 ARG314 LEU315 ALA316 GLN317 PHE318 HIS319 THR320 PRO321 ASP322 CYS323 GLY324 VAL325 GLN326 PHE327 PHE328 MET329 ARG330 PHE331 ARG332 MET333 TYR334 HIS335 VAL336 PRO337 GLY338 LYS339 HIS340 PRO341 ILE342 LEU343 ALA344 PHE345 ALA346 ASN347 ALA348 LYS349 SER350 LYS351 THR352 PHE353 PHE354 TRP355 ASP356 LEU357 ALA358 ARG359 PHE360 GLY361 GLU362 TYR363 ALA364 ARG365 PHE366 MET367 ALA368 ASP369 LEU370 LYS371 GLU372 ALA373 GLN374 GLN375 SER376 TYR377 ASN378 GLY379 ARG380 VAL381 VAL382 VAL383 VAL384 ASP385 GLN386 GLY387 ILE390 SER391 LEU392 ALA393 GLN394 ALA395 GLN396 GLN397 VAL398 HIS399 GLY400 PRO401 GLY402 VAL403 GLY404 VAL405 VAL406 MET407 LYS408 PRO409 ALA410 TRP411 LEU412 VAL413 PRO414 LYS415 VAL478 SER479 ALA480 SER481 PRO482 ASP483 PRO484 ASP485 SER486 PRO487 PHE488 GLY489 PHE490 SER491 ARG492 GLU493 THR494 LEU495 GLN496 ALA497 TRP498 ALA499 ASP500 MET501 TYR502 ASP503 LEU504 SER505 ASN506 PRO507 VAL508 GLY509 LEU510 ILE511 LYS512 ALA513 HIS514 ARG515 SER516 LEU517 ALA518 ILE519 ASP520 GLY521 ALA522 PHE523 VAL524 GLY525 ARG526 GLN527 VAL528 GLY529 TRP530 SER531 PRO532 GLU533 GLY534 GLU535 TRP536 CYS537 VAL538 VAL539 VAL540 GLY541 ASN542 GLY543 ASN544 ARG545 ALA546 LEU547 ILE548 TYR549 GLN550 ARG551 TRP552 GLY553 LYS554 GLU555 ARG556 GLY557
Unit 2 TRP197 THR198 VAL199 ASP200 LYS201 ILE202 ALA203 SER204 ALA205 LEU206 SER207 VAL208 LEU209 ALA210 GLU211 GLU212 VAL213 PRO214 GLN215 ASN216 HIS217 SER218 ARG219 LEU220 VAL221 ASN222 PHE223 LEU224 LEU225 GLU226 GLU227 THR228 GLU229 LYS230 ARG231 ALA232 PRO233 GLN234 PRO235 ARG236 HIS237 LEU238 SER239 LYS240 THR241 ASP242 PRO243 PHE244 ALA245 HIS246 MET247 LYS248 SER249 LYS250 ALA251 ILE252 ASP253 ALA254 ASN255 ARG256 PRO257 ARG258 PRO259 GLU260 GLY261 VAL262 PRO263 THR264 MET265 ASP266 VAL267 LYS268 PHE269 LYS270 GLN271 HIS272 SER273 GLY274 GLU275 TYR276 GLY277 LYS278 SER279 ARG280 ASN281 SER282 GLY283 ARG284 ARG285 PHE286 GLN287 TYR288 PRO289 VAL290 VAL291 CYS292 ILE293 LYS294 PRO295 ASP296 ARG297 GLU298 PRO299 VAL300 PRO301 PRO302 TYR303 ARG304 PHE305 HIS306 HIS307 ALA308 GLU309 ILE310 ARG311 LYS312 ASN313 ILE314 LEU315 ALA316 LEU317 ASN318 SER319 GLN320 LEU321 ASN322 PHE323 VAL324 PRO325 HIS326 LEU327 ARG328 ASP329 VAL330 ASP331 PRO332 ASN333 SER334 ALA335 GLU336 GLU337 GLN338 LYS339 TYR340 SER341 ALA342 TRP343 LEU344 MET345 ASP346 LEU347 GLU348 ASN349 LEU350 ASP351 SER352 LYS353 SER354 GLY355 PHE356 PRO360 ARG361 SER362 GLN363 LYS364 ILE365 ALA366 LYS367 ARG368 ALA369 GLN370 ALA371 GLU372 TYR373 ALA374 ALA375 THR376 LEU377 ALA378 PRO379 TYR380 LEU381 GLU382 PRO383 TRP384 LEU385 ARG386 LYS387 LEU388 ASN389 ILE390 GLU391 CYS393 THR394 LYS395 SER396 ASN397 LEU398 ILE399 ARG400 PHE401 MET402 ALA403 SER404 GLN405 PRO406 GLU407 THR413 PRO414 GLN415 GLN416 LYS417 SER418 ASN419 LEU420 LEU421 ASP422 THR423 TYR424 SER425 ASP426 ASP427 ALA433 VAL434 ARG435 ASN436 ALA437 SER438 MET439 PHE440 THR441 GLU442 ALA443 TRP444 ASP445 ARG446 VAL447 PHE448 ASN449 ASP450 GLN451 ARG455 ARG456 VAL457 ALA458 LEU459 ARG460 ASP461 ILE462 LEU463 MET464 LEU465 ASP466 LYS467 ASN468 VAL469 GLU470 PRO471 ILE472 PHE473 GLU490 ALA491 LEU492 MET493 GLN494 LYS495 VAL496 ILE497 ASP498 ALA499 LEU500 GLY501 SER502 TYR503 THR504 THR505 LEU506 GLY507 CYS508 LEU509 ILE510 CYS511 PHE512 SER513 HIS514 ASP515 CYS516 GLU517 HIS518 GLY519 GLU520 ILE521 GLU522 ARG523 ASP524 ASN525 GLN526 LYS527 ARG528 CYS529 PHE530 SER531 LEU532 GLU533 GLU534 ILE535 GLY536 GLY537 LEU538 MET539 PRO540 SER541 LEU542 ARG543 ARG544 LYS545 TRP546 ALA547 ALA548 GLN549 ILE550 GLU551 GLN552 PRO568 PRO569 CYS570 ARG571 ASN572 GLU573 CYS574 TYR575 ILE577 HIS578 GLY579 THR580 PRO588 PRO589 TRP590 SER591 GLU592 ASN593 GLU594 VAL595 GLY596 THR597 LEU598 GLU599 TRP600 MET601 PHE602 ALA603 THR604 ILE605 GLY606 TYR607 SER608 LEU611 ARG612 PRO613 GLU614 CYS615 PHE616 VAL617 GLY618 ALA619 ILE620 LEU621 ARG623 PRO624 CYS625 TRP626 ASP627 VAL628 HIS629 ARG630 LYS631 LEU632 GLN633 GLU634 LEU635 ASP636 LEU637 ARG638 LEU639 PRO640 ILE647 PRO648 LYS649 GLN650 LYS651 SER652 LEU653 PRO654 TRP655 TYR656 ASP657 ARG658 ARG659 LYS660 LYS661 GLN662 LEU663 MET664 SER665 ASP666 TRP667 ALA668 ASP669 ALA670 THR671 ILE672 THR673 HIS674 GLU675 HIS676 ALA677 VAL678 ARG679 GLU680 LEU681 PHE682 ALA683 PRO684 CYS685 HIS686 HIS687 ASP688 GLY689 PRO690 CYS691 THR692 ALA693 ALA694 ASN695 GLY696 CYS697 PRO698 CYS699 ALA700 SER701 ALA702 GLY703 THR704 HIS705 PRO706 VAL707 LEU708 CYS709 GLU710 ARG711 PHE712 CYS713 LEU714 CYS715 THR716 ALA717 GLU718 GLU719 CYS720 PRO721 LEU722 LYS723 PHE724 THR725 GLY726 CYS727 ALA728 CYS729 HIS730 SER731 SER732 GLY733 LYS734 THR735 CYS736 LEU737 GLN738 ARG739 GLN740 GLY743 ARG744 PRO745 CYS746 ILE747 CYS748 VAL749 GLN750 LEU751 ASN752 ARG753 GLU754 CYS755 ASP756 PRO757 THR758 LEU759 CYS760 LYS761 GLY762 CYS763 GLY764 ALA765 ARG766 GLU767 ARG768 ALA769 ASP770 PRO771 GLU772 ASN773 ALA774 TYR775 ASP776 GLU777 VAL778 LEU779 HIS780 SER781 THR782 GLY783 CYS784 GLN785 ASN786 VAL787 ALA788 LEU789 GLN790 ARG791 GLY792 ALA793 ALA794 LYS795 ALA796 VAL797 VAL798 LEU799 GLY800 LYS801 SER802 GLN803 LEU804 GLU805 ALA806 CYS807 GLY808 TYR809 GLY810 LEU811 PHE812 ALA813 ALA814 GLU815 ASP816 ILE817 GLU818 GLU819 GLY820 GLU821 PHE822 VAL823 ILE824 GLU825 TYR826 THR827 GLY828 GLU829 LEU830 ILE831 SER832 HIS833 ASP834 GLU835 GLY836 VAL837 ARG838 ARG839 GLU840 HIS841 ARG842 ARG843 GLY844 ASP845 VAL846 PHE847 ASP848 LYS852 VAL853 SER854 TYR855 LEU856 PHE857 THR858 LEU859 LEU860 GLU861 GLN862 GLU863 GLY864 ILE865 TRP866 VAL867 ASP868 ALA869 ALA870 ILE871 TYR872 GLY873 ASN874 LEU875 SER876 ARG877 TYR878 ILE879 ASN880 HIS881 ALA882 THR883 ASP884 GLY885 ASN886 ILE887 MET888 PRO889 LYS890 ILE891 MET892 TYR893 VAL894 ASN895 HIS896 GLU897 TRP898 ARG899 ILE900 LYS901 PHE902 THR903 ALA904 ILE905 LYS906 ASP907 ILE908 LYS909 ALA910 GLY911 GLU912 GLU913 LEU914 PHE915 PHE916 ASN917 TYR918 GLY919 ASP920 ASN921 PHE922 PRO923 ASN924 LEU925 THR926 LYS927 LYS928 LEU929 GLU2530 VAL2531 MET2532 LEU2533 PRO2534 GLY2535 ARG2536 GLY2537 VAL2538 PRO2539 PRO2550 LEU2551 LEU2552 VAL2553 PRO2554 LYS2555 THR2556 THR2557 GLN2558 PRO2559 LEU2560 PHE2561 ASP2562 PRO2563 LEU2564 SER2565 LYS2566 VAL2567 GLN2568 LEU2569 LEU2570 PRO2571 GLY2572 GLN2573 PRO2574 LEU2575 PRO2576 GLN2577 HIS2578 PRO2579 ILE2580 ASP2581 ASP2582 SER2583 TRP2584 LEU2585 LEU2586 LEU2587 LYS2588 HIS2589 ARG2590 ASP2591 ASN2592 LEU2593 GLN2594 ASP2595 PHE2596 ILE2597 ASP2598 LEU2599 ARG2600 PRO2601 GLU2602 GLU2603 LYS2604 GLU2605 PHE2606 LEU2607 GLN2608 GLU2609 TRP2610 ASP2611 ALA2612 PHE2613 ILE2614 LEU2615 ARG2616 ARG2617 HIS2618 ILE2619 SER2620 SER2621 GLU2622 GLN2623 TYR2624 LEU2625 PRO2626 ARG2627 TYR2628 PHE2629 LEU2630 ARG2631 PHE2632 VAL2633 ARG2634 GLU2635 LYS2636 ALA2637 ASP2638 TRP2639 LEU2640 VAL2641 SER2642 LYS2643 ARG2644 SER2645 ARG2646 GLY2647 GLU2648 GLU2649 PHE2650 SER2651 LYS2652 LEU2653 VAL2654 ALA2655 THR2656 LEU2657 LEU2658 ALA2659 ARG2660 ARG2661 VAL2662 LEU2663 PRO2664 GLU2665 ARG2666 VAL2667 VAL2668 ILE2669 GLU2670 ALA2671 THR2672 GLN2673 VAL2674 LEU2675 ASN2676 ASP2677 ALA2678 ARG2679 GLY2680 ARG2681 LEU2682 ARG2683
Unit 3 LYS23 ALA24 ALA25 ARG26 M3L27 SER28 ALA29 PRO30
Ligands
Unit 4 ZN8001 ZN8002 ZN8003 ZN8004 ZN8005 ZN8006 ZN8007 ZN8008 SAH8009
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany