5KEM - Sequence, Chains, Asymmetric and Biological Units

• Title: EBOV SGP IN COMPLEX WITH VARIABLE FAB DOMAINS OF IGGS C13C6
• Keywords: EBOLA VIRUS SECRETED GLYCOPROTEIN, SGP, ANTIBODIES, VIRAL PR IMMUNE SYSTEM COMPLEX
• Experiment: ELECTRON MICROSCOPY
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5KEM	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	BDBV91 VARIABLE FAB DOMAIN LIGHT CHAIN	C	107	815	0
2	Protein	BDBV91 VARIABLE FAB DOMAIN HEAVY CHAIN	B	121	964	0
3	Protein	C13C6 VARIABLE FAB DOMAIN HEAVY CHAIN	D	121	930	0
4	Protein	C13C6 VARIABLE FAB DOMAIN LIGHT CHAIN	E	107	815	0
5	Protein	EBOLA SECRETED GLYCOPROTEIN	A	232	1784	0
6	Protein	BDBV91 VARIABLE FAB DOMAIN LIGHT CHAIN	H	107	815	0
7	Protein	BDBV91 VARIABLE FAB DOMAIN HEAVY CHAIN	G	121	964	0
8	Protein	C13C6 VARIABLE FAB DOMAIN HEAVY CHAIN	I	121	930	0
9	Protein	C13C6 VARIABLE FAB DOMAIN LIGHT CHAIN	J	107	815	0
10	Protein	EBOLA SECRETED GLYCOPROTEIN	F	232	1784	0
total				1376	10616	0

Proteins

Unit 1	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 THR 26 GLU 27 SER 28 ILE 29 GLY 30 ILE 31 TYR 32 LEU 33 ASN 34 TRP 35 TYR 36 GLN 37 ARG 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 ASN 45 LEU 46 LEU 47 ILE 48 PHE 49 ALA 50 THR 51 SER 52 SER 53 LEU 54 GLN 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLU 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 THR 85 TYR 86 PHE 87 CYS 88 GLN 89 GLN 90 GLY 91 PHE 92 SER 93 SER 94 PRO 95 PHE 96 SER 97 PHE 98 GLY 99 GLN 100 GLY 101 THR 102 ARG 103 LEU 104 GLU 105 ILE 106 LYS 107
Unit 2	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 LEU 11 LYS 12 PRO 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 PRO 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 ASP 31 TYR 32 TYR 33 ILE 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 TRP 50 ILE 51 ASN 52 PRO 52A LYS 53 SER 54 GLY 55 GLU 56 THR 57 HIS 58 TYR 59 ALA 60 GLN 61 LYS 62 PHE 63 ARG 64 GLY 65 TRP 66 VAL 67 THR 68 LEU 69 THR 70 ARG 71 ASP 72 THR 73 SER 74 ILE 75 SER 76 THR 77 THR 78 TYR 79 MET 80 ASP 81 LEU 82 THR 82A ARG 82B LEU 82C LYS 83 SER 84 ASP 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 PHE 91 CYS 92 ALA 93 ARG 94 GLY 95 ASP 96 LEU 97 GLU 98 THR 99 THR 100 ILE 100A PHE 100B PHE 100C TYR 100D ASN 100E ALA 100F VAL 100G ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110
Unit 3	ASP 1 VAL 2 LYS 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 LYS 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 SER 28 LEU 29 SER 30 THR 31 SER 32 GLY 33 VAL 34 GLY 35 VAL 35A GLY 35B TRP 36 PHE 37 ARG 38 GLN 39 PRO 40 SER 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 LEU 48 ALA 49 LEU 50 ILE 51 TRP 52 TRP 53 ASP 54 ASP 55 ASP 56 LYS 57 TYR 58 TYR 59 ASN 60 PRO 61 SER 62 LEU 63 LYS 64 SER 65 GLN 66 LEU 67 SER 68 ILE 69 SER 70 LYS 71 ASP 72 PHE 73 SER 74 ARG 75 ASN 76 GLN 77 VAL 78 PHE 79 LEU 80 LYS 81 ILE 82 SER 82A ASN 82B VAL 82C ASP 83 ILE 84 ALA 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 ARG 95 ASP 96 PRO 97 PHE 98 GLY 99 TYR 100 ASP 100A ASN 100B ALA 100C MET 100D GLY 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112
Unit 4	ASP 1 ILE 2 VAL 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 LEU 9 SER 10 LEU 11 SER 12 THR 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 SER 20 LEU 21 THR 22 CYS 23 LYS 24 ALA 25 SER 26 GLN 27 ASN 28 VAL 29 GLY 30 THR 31 ALA 32 VAL 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 SER 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 SER 50 ALA 51 SER 52 ASN 53 ARG 54 TYR 55 THR 56 GLY 57 VAL 58 PRO 59 ASP 60 ARG 61 PHE 62 THR 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 ASN 77 MET 78 GLN 79 SER 80 GLU 81 ASP 82 LEU 83 ALA 84 ASP 85 TYR 86 PHE 87 CYS 88 GLN 89 GLN 90 TYR 91 SER 92 SER 93 TYR 94 PRO 95 LEU 96 THR 97 PHE 98 GLY 99 ALA 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 LEU 106 ARG 107
Unit 5	CYS 53 ARG 54 ASP 55 LYS 56 LEU 57 SER 58 SER 59 THR 60 ASN 61 GLN 62 LEU 63 ARG 64 SER 65 VAL 66 GLY 67 LEU 68 ASN 69 LEU 70 GLU 71 GLY 72 ASN 73 GLY 74 VAL 75 ALA 76 THR 77 ASP 78 VAL 79 PRO 80 SER 81 ALA 82 THR 83 LYS 84 ARG 85 TRP 86 GLY 87 PHE 88 ARG 89 SER 90 GLY 91 VAL 92 PRO 93 PRO 94 LYS 95 VAL 96 VAL 97 ASN 98 TYR 99 GLU 100 ALA 101 GLY 102 GLU 103 TRP 104 ALA 105 GLU 106 ASN 107 CYS 108 TYR 109 ASN 110 LEU 111 GLU 112 ILE 113 LYS 114 LYS 115 PRO 116 ASP 117 GLY 118 SER 119 GLU 120 CYS 121 LEU 122 PRO 123 ALA 124 ALA 125 PRO 126 ASP 127 GLY 128 ILE 129 ARG 130 GLY 131 PHE 132 PRO 133 ARG 134 CYS 135 ARG 136 TYR 137 VAL 138 HIS 139 LYS 140 VAL 141 SER 142 GLY 143 THR 144 GLY 145 PRO 146 CYS 147 ALA 148 GLY 149 ASP 150 PHE 151 ALA 152 PHE 153 HIS 154 LYS 155 GLU 156 GLY 157 ALA 158 PHE 159 PHE 160 LEU 161 TYR 162 ASP 163 ARG 164 LEU 165 ALA 166 SER 167 THR 168 VAL 169 ILE 170 TYR 171 ARG 172 GLY 173 THR 174 THR 175 PHE 176 ALA 177 GLU 178 GLY 179 VAL 180 VAL 181 ALA 182 PHE 183 LEU 184 ILE 185 LEU 186 PRO 187 GLN 188 ALA 189 LYS 190 LYS 191 ASP 192 PHE 193 PHE 194 SER 195 SER 196 HIS 197 PRO 198 LEU 199 ARG 200 GLU 201 PRO 202 VAL 203 ASN 204 ALA 205 THR 206 GLU 207 ASP 208 PRO 209 SER 210 SER 211 GLY 212 TYR 213 TYR 214 SER 215 THR 216 THR 217 ILE 218 ARG 219 TYR 220 GLN 221 ALA 222 THR 223 GLY 224 PHE 225 GLY 226 THR 227 ASN 228 GLU 229 THR 230 GLU 231 TYR 232 LEU 233 PHE 234 GLU 235 VAL 236 ASP 237 ASN 238 LEU 239 THR 240 TYR 241 VAL 242 GLN 243 LEU 244 GLU 245 SER 246 ARG 247 PHE 248 THR 249 PRO 250 GLN 251 PHE 252 LEU 253 LEU 254 GLN 255 LEU 256 ASN 257 GLU 258 THR 259 ILE 260 TYR 261 THR 262 SER 263 GLY 264 LYS 265 ARG 266 SER 267 ASN 268 THR 269 THR 270 GLY 271 LYS 272 LEU 273 ILE 274 TRP 275 LYS 276 VAL 277 ASN 278 PRO 279 GLU 280 ILE 281 ASP 282 THR 283 THR 284
Unit 6	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 THR 26 GLU 27 SER 28 ILE 29 GLY 30 ILE 31 TYR 32 LEU 33 ASN 34 TRP 35 TYR 36 GLN 37 ARG 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 ASN 45 LEU 46 LEU 47 ILE 48 PHE 49 ALA 50 THR 51 SER 52 SER 53 LEU 54 GLN 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLU 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 THR 85 TYR 86 PHE 87 CYS 88 GLN 89 GLN 90 GLY 91 PHE 92 SER 93 SER 94 PRO 95 PHE 96 SER 97 PHE 98 GLY 99 GLN 100 GLY 101 THR 102 ARG 103 LEU 104 GLU 105 ILE 106 LYS 107
Unit 7	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 LEU 11 LYS 12 PRO 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 PRO 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 ASP 31 TYR 32 TYR 33 ILE 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 TRP 50 ILE 51 ASN 52 PRO 52A LYS 53 SER 54 GLY 55 GLU 56 THR 57 HIS 58 TYR 59 ALA 60 GLN 61 LYS 62 PHE 63 ARG 64 GLY 65 TRP 66 VAL 67 THR 68 LEU 69 THR 70 ARG 71 ASP 72 THR 73 SER 74 ILE 75 SER 76 THR 77 THR 78 TYR 79 MET 80 ASP 81 LEU 82 THR 82A ARG 82B LEU 82C LYS 83 SER 84 ASP 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 PHE 91 CYS 92 ALA 93 ARG 94 GLY 95 ASP 96 LEU 97 GLU 98 THR 99 THR 100 ILE 100A PHE 100B PHE 100C TYR 100D ASN 100E ALA 100F VAL 100G ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110
Unit 8	ASP 1 VAL 2 LYS 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 LYS 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 SER 28 LEU 29 SER 30 THR 31 SER 32 GLY 33 VAL 34 GLY 35 VAL 35A GLY 35B TRP 36 PHE 37 ARG 38 GLN 39 PRO 40 SER 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 LEU 48 ALA 49 LEU 50 ILE 51 TRP 52 TRP 53 ASP 54 ASP 55 ASP 56 LYS 57 TYR 58 TYR 59 ASN 60 PRO 61 SER 62 LEU 63 LYS 64 SER 65 GLN 66 LEU 67 SER 68 ILE 69 SER 70 LYS 71 ASP 72 PHE 73 SER 74 ARG 75 ASN 76 GLN 77 VAL 78 PHE 79 LEU 80 LYS 81 ILE 82 SER 82A ASN 82B VAL 82C ASP 83 ILE 84 ALA 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 ARG 95 ASP 96 PRO 97 PHE 98 GLY 99 TYR 100 ASP 100A ASN 100B ALA 100C MET 100D GLY 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112
Unit 9	ASP 1 ILE 2 VAL 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 LEU 9 SER 10 LEU 11 SER 12 THR 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 SER 20 LEU 21 THR 22 CYS 23 LYS 24 ALA 25 SER 26 GLN 27 ASN 28 VAL 29 GLY 30 THR 31 ALA 32 VAL 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 SER 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 SER 50 ALA 51 SER 52 ASN 53 ARG 54 TYR 55 THR 56 GLY 57 VAL 58 PRO 59 ASP 60 ARG 61 PHE 62 THR 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 ASN 77 MET 78 GLN 79 SER 80 GLU 81 ASP 82 LEU 83 ALA 84 ASP 85 TYR 86 PHE 87 CYS 88 GLN 89 GLN 90 TYR 91 SER 92 SER 93 TYR 94 PRO 95 LEU 96 THR 97 PHE 98 GLY 99 ALA 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 LEU 106 ARG 107
Unit 10	CYS 53 ARG 54 ASP 55 LYS 56 LEU 57 SER 58 SER 59 THR 60 ASN 61 GLN 62 LEU 63 ARG 64 SER 65 VAL 66 GLY 67 LEU 68 ASN 69 LEU 70 GLU 71 GLY 72 ASN 73 GLY 74 VAL 75 ALA 76 THR 77 ASP 78 VAL 79 PRO 80 SER 81 ALA 82 THR 83 LYS 84 ARG 85 TRP 86 GLY 87 PHE 88 ARG 89 SER 90 GLY 91 VAL 92 PRO 93 PRO 94 LYS 95 VAL 96 VAL 97 ASN 98 TYR 99 GLU 100 ALA 101 GLY 102 GLU 103 TRP 104 ALA 105 GLU 106 ASN 107 CYS 108 TYR 109 ASN 110 LEU 111 GLU 112 ILE 113 LYS 114 LYS 115 PRO 116 ASP 117 GLY 118 SER 119 GLU 120 CYS 121 LEU 122 PRO 123 ALA 124 ALA 125 PRO 126 ASP 127 GLY 128 ILE 129 ARG 130 GLY 131 PHE 132 PRO 133 ARG 134 CYS 135 ARG 136 TYR 137 VAL 138 HIS 139 LYS 140 VAL 141 SER 142 GLY 143 THR 144 GLY 145 PRO 146 CYS 147 ALA 148 GLY 149 ASP 150 PHE 151 ALA 152 PHE 153 HIS 154 LYS 155 GLU 156 GLY 157 ALA 158 PHE 159 PHE 160 LEU 161 TYR 162 ASP 163 ARG 164 LEU 165 ALA 166 SER 167 THR 168 VAL 169 ILE 170 TYR 171 ARG 172 GLY 173 THR 174 THR 175 PHE 176 ALA 177 GLU 178 GLY 179 VAL 180 VAL 181 ALA 182 PHE 183 LEU 184 ILE 185 LEU 186 PRO 187 GLN 188 ALA 189 LYS 190 LYS 191 ASP 192 PHE 193 PHE 194 SER 195 SER 196 HIS 197 PRO 198 LEU 199 ARG 200 GLU 201 PRO 202 VAL 203 ASN 204 ALA 205 THR 206 GLU 207 ASP 208 PRO 209 SER 210 SER 211 GLY 212 TYR 213 TYR 214 SER 215 THR 216 THR 217 ILE 218 ARG 219 TYR 220 GLN 221 ALA 222 THR 223 GLY 224 PHE 225 GLY 226 THR 227 ASN 228 GLU 229 THR 230 GLU 231 TYR 232 LEU 233 PHE 234 GLU 235 VAL 236 ASP 237 ASN 238 LEU 239 THR 240 TYR 241 VAL 242 GLN 243 LEU 244 GLU 245 SER 246 ARG 247 PHE 248 THR 249 PRO 250 GLN 251 PHE 252 LEU 253 LEU 254 GLN 255 LEU 256 ASN 257 GLU 258 THR 259 ILE 260 TYR 261 THR 262 SER 263 GLY 264 LYS 265 ARG 266 SER 267 ASN 268 THR 269 THR 270 GLY 271 LYS 272 LEU 273 ILE 274 TRP 275 LYS 276 VAL 277 ASN 278 PRO 279 GLU 280 ILE 281 ASP 282 THR 283 THR 284