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Sequence, Chains, Asymmetric and Biological Units

Title DELETION-INSERTION CHIMERA OF MBP WITH THE PREPROTEIN CROSS- DOMAIN OF THE SECA ATPASE
Keywords PREPROTEIN TRANSLOCASE, SECA, PREPROTEIN CROSS-LINKING DOMAI MBP CHIMERA, PROTEIN TRANSPORT
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5K94     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN,PROTEIN TRANS SUBUNIT SECA,MALTOSE-BINDING PERIPLASMIC PROTEIN  A 506 3968 0
2  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN,PROTEIN TRANS SUBUNIT SECA,MALTOSE-BINDING PERIPLASMIC PROTEIN  B 506 3968 0
3  Ligand   MALTOSE-BINDING PERIPLASMIC PROTEIN,PROTEIN TRANS SUBUNIT SECA,MALTOSE-BINDING PERIPLASMIC PROTEIN  A 1 0 19
4  Ligand   MALTOSE-BINDING PERIPLASMIC PROTEIN,PROTEIN TRANS SUBUNIT SECA,MALTOSE-BINDING PERIPLASMIC PROTEIN  B 1 0 19
5 Water     454 0 454
total       1468 7936 492
Proteins
Unit 1 LYS1 ILE2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ASP82 LYS83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA229 GLU230 ASP231 SER232 SER233 GLU234 MET235 TYR236 LYS237 ARG238 VAL239 ASN240 LYS241 ILE242 ILE243 PRO244 HIS245 LEU246 ILE247 ARG248 GLN249 GLU250 LYS251 GLU252 ASP253 SER254 GLU255 THR256 PHE257 GLN258 GLY259 GLU260 GLY261 HIS262 PHE263 SER264 VAL265 ASP266 GLU267 LYS268 SER269 ARG270 GLN271 VAL272 ASN273 LEU274 THR275 GLU276 ARG277 GLY278 LEU279 VAL280 LEU281 ILE282 GLU283 GLU284 LEU285 LEU286 VAL287 LYS288 GLU289 GLY290 ILE291 MET292 ASP293 GLU294 GLY295 GLU296 SER297 LEU298 TYR299 SER300 PRO301 ALA302 ASN303 ILE304 MET305 LEU306 MET307 HIS308 HIS309 VAL310 THR311 ALA312 ALA313 LEU314 ARG315 ALA316 HIS317 ALA318 LEU319 PHE320 THR321 ARG322 ASP323 VAL324 ASP325 TYR326 ILE327 VAL328 LYS329 ASP330 GLY331 GLU332 VAL333 ILE334 ILE335 VAL336 ASP337 GLU338 HIS339 THR340 GLY341 ARG342 THR343 MET344 GLN345 GLY346 ARG347 ARG348 TRP349 SER350 ASP351 GLY352 LEU353 HIS354 GLN355 ALA356 VAL357 GLU358 ALA359 LYS360 GLU361 GLY362 VAL363 GLN364 ILE365 GLN366 ASN367 GLU368 TYR1176 ASP1177 ILE1178 LYS1179 ASP1180 VAL1181 GLY1182 VAL1183 ASP1184 ASN1185 ALA1186 GLY1187 ALA1188 LYS1189 ALA1190 GLY1191 LEU1192 THR1193 PHE1194 LEU1195 VAL1196 ASP1197 LEU1198 ILE1199 LYS1200 ASN1201 LYS1202 HIS1203 MET1204 ASN1205 ALA1206 ASP1207 THR1208 ASP1209 TYR1210 SER1211 ILE1212 ALA1213 GLU1214 ALA1215 ALA1216 PHE1217 ASN1218 LYS1219 GLY1220 GLU1221 THR1222 ALA1223 MET1224 THR1225 ILE1226 ASN1227 GLY1228 PRO1229 TRP1230 ALA1231 TRP1232 SER1233 ASN1234 ILE1235 ASP1236 THR1237 SER1238 LYS1239 VAL1240 ASN1241 TYR1242 GLY1243 VAL1244 THR1245 VAL1246 LEU1247 PRO1248 THR1249 PHE1250 LYS1251 GLY1252 GLN1253 PRO1254 SER1255 LYS1256 PRO1257 PHE1258 VAL1259 GLY1260 VAL1261 LEU1262 SER1263 ALA1264 GLY1265 ILE1266 ASN1267 ALA1268 ALA1269 SER1270 PRO1271 ASN1272 LYS1273 GLU1274 LEU1275 ALA1276 LYS1277 GLU1278 PHE1279 LEU1280 GLU1281 ASN1282 TYR1283 LEU1284 LEU1285 THR1286 ASP1287 GLU1288 GLY1289 LEU1290 GLU1291 ALA1292 VAL1293 ASN1294 LYS1295 ASP1296 LYS1297 PRO1298 LEU1299 GLY1300 ALA1301 VAL1302 ALA1303 LEU1304 LYS1305 SER1306 TYR1307 GLU1308 GLU1309 GLU1310 LEU1311 ALA1312 LYS1313 ASP1314 PRO1315 ARG1316 ILE1317 ALA1318 ALA1319 THR1320 MET1321 GLU1322 ASN1323 ALA1324 GLN1325 LYS1326 GLY1327 GLU1328 ILE1329 MET1330 PRO1331 ASN1332 ILE1333 PRO1334 GLN1335 MET1336 SER1337 ALA1338 PHE1339 TRP1340 TYR1341 ALA1342 VAL1343 ARG1344 THR1345 ALA1346 VAL1347 ILE1348 ASN1349 ALA1350 ALA1351 SER1352 GLY1353 ARG1354 GLN1355 THR1356 VAL1357 ASP1358 GLU1359 ALA1360 LEU1361 LYS1362 ASP1363 ALA1364 GLN1365 THR1366 ARG1367 ILE1368 THR1369 LYS1370
Unit 2 LYS1 ILE2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ASP82 LYS83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA229 GLU230 ASP231 SER232 SER233 GLU234 MET235 TYR236 LYS237 ARG238 VAL239 ASN240 LYS241 ILE242 ILE243 PRO244 HIS245 LEU246 ILE247 ARG248 GLN249 GLU250 LYS251 GLU252 ASP253 SER254 GLU255 THR256 PHE257 GLN258 GLY259 GLU260 GLY261 HIS262 PHE263 SER264 VAL265 ASP266 GLU267 LYS268 SER269 ARG270 GLN271 VAL272 ASN273 LEU274 THR275 GLU276 ARG277 GLY278 LEU279 VAL280 LEU281 ILE282 GLU283 GLU284 LEU285 LEU286 VAL287 LYS288 GLU289 GLY290 ILE291 MET292 ASP293 GLU294 GLY295 GLU296 SER297 LEU298 TYR299 SER300 PRO301 ALA302 ASN303 ILE304 MET305 LEU306 MET307 HIS308 HIS309 VAL310 THR311 ALA312 ALA313 LEU314 ARG315 ALA316 HIS317 ALA318 LEU319 PHE320 THR321 ARG322 ASP323 VAL324 ASP325 TYR326 ILE327 VAL328 LYS329 ASP330 GLY331 GLU332 VAL333 ILE334 ILE335 VAL336 ASP337 GLU338 HIS339 THR340 GLY341 ARG342 THR343 MET344 GLN345 GLY346 ARG347 ARG348 TRP349 SER350 ASP351 GLY352 LEU353 HIS354 GLN355 ALA356 VAL357 GLU358 ALA359 LYS360 GLU361 GLY362 VAL363 GLN364 ILE365 GLN366 ASN367 GLU368 TYR1176 ASP1177 ILE1178 LYS1179 ASP1180 VAL1181 GLY1182 VAL1183 ASP1184 ASN1185 ALA1186 GLY1187 ALA1188 LYS1189 ALA1190 GLY1191 LEU1192 THR1193 PHE1194 LEU1195 VAL1196 ASP1197 LEU1198 ILE1199 LYS1200 ASN1201 LYS1202 HIS1203 MET1204 ASN1205 ALA1206 ASP1207 THR1208 ASP1209 TYR1210 SER1211 ILE1212 ALA1213 GLU1214 ALA1215 ALA1216 PHE1217 ASN1218 LYS1219 GLY1220 GLU1221 THR1222 ALA1223 MET1224 THR1225 ILE1226 ASN1227 GLY1228 PRO1229 TRP1230 ALA1231 TRP1232 SER1233 ASN1234 ILE1235 ASP1236 THR1237 SER1238 LYS1239 VAL1240 ASN1241 TYR1242 GLY1243 VAL1244 THR1245 VAL1246 LEU1247 PRO1248 THR1249 PHE1250 LYS1251 GLY1252 GLN1253 PRO1254 SER1255 LYS1256 PRO1257 PHE1258 VAL1259 GLY1260 VAL1261 LEU1262 SER1263 ALA1264 GLY1265 ILE1266 ASN1267 ALA1268 ALA1269 SER1270 PRO1271 ASN1272 LYS1273 GLU1274 LEU1275 ALA1276 LYS1277 GLU1278 PHE1279 LEU1280 GLU1281 ASN1282 TYR1283 LEU1284 LEU1285 THR1286 ASP1287 GLU1288 GLY1289 LEU1290 GLU1291 ALA1292 VAL1293 ASN1294 LYS1295 ASP1296 LYS1297 PRO1298 LEU1299 GLY1300 ALA1301 VAL1302 ALA1303 LEU1304 LYS1305 SER1306 TYR1307 GLU1308 GLU1309 GLU1310 LEU1311 ALA1312 LYS1313 ASP1314 PRO1315 ARG1316 ILE1317 ALA1318 ALA1319 THR1320 MET1321 GLU1322 ASN1323 ALA1324 GLN1325 LYS1326 GLY1327 GLU1328 ILE1329 MET1330 PRO1331 ASN1332 ILE1333 PRO1334 GLN1335 MET1336 SER1337 ALA1338 PHE1339 TRP1340 TYR1341 ALA1342 VAL1343 ARG1344 THR1345 ALA1346 VAL1347 ILE1348 ASN1349 ALA1350 ALA1351 SER1352 GLY1353 ARG1354 GLN1355 THR1356 VAL1357 ASP1358 GLU1359 ALA1360 LEU1361 LYS1362 ASP1363 ALA1364 GLN1365 THR1366 ARG1367 ILE1368 THR1369 LYS1370
Ligands
Unit 3 B3P1401
Unit 4 B3P1401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany