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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AIBR IN COMPLEX WITH ISOVALERYL COENZYM OPERATOR DNA
Keywords TETR LIKE REGULATOR, ISOVALERYL COENZYME A, REGULATION, OPER TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5K7Z     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSCRIPTIONAL REGULATOR, TETR FAMILY  A 185 2988 0
2  Protein   TRANSCRIPTIONAL REGULATOR, TETR FAMILY  B 184 2956 0
3  Protein   TRANSCRIPTIONAL REGULATOR, TETR FAMILY  C 185 2988 0
4  Protein   TRANSCRIPTIONAL REGULATOR, TETR FAMILY  D 184 2963 0
5  Other macromolecule   DNA (32-MER)  E 16 506 0
6  Other macromolecule   DNA (32-MER)  F 16 509 0
7  Ligand   TRANSCRIPTIONAL REGULATOR, TETR FAMILY  A 1 0 94
8  Ligand   TRANSCRIPTIONAL REGULATOR, TETR FAMILY  B 1 0 94
9  Ligand   TRANSCRIPTIONAL REGULATOR, TETR FAMILY  C 1 0 94
10  Ligand   TRANSCRIPTIONAL REGULATOR, TETR FAMILY  D 1 0 94
11 Water     54 0 55
total       828 12910 431

Proteins
Unit 1 GLU13 ARG14 TYR15 ARG16 ALA17 ILE18 LEU19 GLU20 THR21 ALA22 ALA23 ARG24 LEU25 ILE26 CYS27 ASP28 ARG29 GLY30 TYR31 GLU32 GLY33 THR34 SER35 MET36 GLN37 GLU38 ILE39 ALA40 ALA41 ALA42 CYS43 ARG44 MET45 THR46 LYS47 ALA48 GLY49 LEU50 TYR51 HIS52 HIS53 ILE54 GLN55 ASN56 LYS57 GLU58 GLN59 LEU60 LEU61 PHE62 ALA63 ILE64 MET65 ASN66 TYR67 GLY68 MET69 ASP70 LEU71 PHE72 GLU73 GLU74 GLN75 VAL76 LEU77 SER78 ARG79 VAL80 GLN81 ASP82 ILE83 ALA84 ASN85 PRO86 VAL87 GLU88 ARG89 LEU90 ARG91 ALA92 CYS93 MET94 ARG95 HIS96 ASN97 ILE98 LEU99 LEU100 VAL101 THR102 ARG103 GLY104 TRP105 SER106 LYS107 GLU108 VAL109 ILE110 ILE111 ILE112 LEU113 HIS114 GLU115 HIS116 ALA117 THR118 LEU119 THR120 GLY121 GLU122 THR123 ARG124 ALA125 PHE126 ILE127 ASP128 ALA129 ARG130 LYS131 LYS132 LYS133 TYR134 VAL135 ASP136 PHE137 LEU138 GLU139 GLU140 ALA141 PHE142 SER143 GLN144 ALA145 SER146 GLN147 GLN148 GLY149 LEU150 ILE151 ARG152 PRO153 VAL154 ASP155 PRO156 THR157 VAL158 GLY159 ALA160 PHE161 SER162 PHE163 LEU164 GLY165 MET166 VAL167 LEU168 TRP169 ILE170 TYR171 LYS172 TRP173 PHE174 LYS175 PRO176 ASP177 GLY178 ARG179 LEU180 THR181 ASP182 GLU183 GLN184 ILE185 ALA186 ASP187 GLY188 MET189 VAL190 GLY191 MET192 LEU193 PHE194 PRO195 PRO196 PHE197
Unit 2 ARG14 TYR15 ARG16 ALA17 ILE18 LEU19 GLU20 THR21 ALA22 ALA23 ARG24 LEU25 ILE26 CYS27 ASP28 ARG29 GLY30 TYR31 GLU32 GLY33 THR34 SER35 MET36 GLN37 GLU38 ILE39 ALA40 ALA41 ALA42 CYS43 ARG44 MET45 THR46 LYS47 ALA48 GLY49 LEU50 TYR51 HIS52 HIS53 ILE54 GLN55 ASN56 LYS57 GLU58 GLN59 LEU60 LEU61 PHE62 ALA63 ILE64 MET65 ASN66 TYR67 GLY68 MET69 ASP70 LEU71 PHE72 GLU73 GLU74 GLN75 VAL76 LEU77 SER78 ARG79 VAL80 GLN81 ASP82 ILE83 ALA84 ASN85 PRO86 VAL87 GLU88 ARG89 LEU90 ARG91 ALA92 CYS93 MET94 ARG95 HIS96 ASN97 ILE98 LEU99 LEU100 VAL101 THR102 ARG103 GLY104 TRP105 SER106 LYS107 GLU108 VAL109 ILE110 ILE111 ILE112 LEU113 HIS114 GLU115 HIS116 ALA117 THR118 LEU119 THR120 GLY121 GLU122 THR123 ARG124 ALA125 PHE126 ILE127 ASP128 ALA129 ARG130 LYS131 LYS132 LYS133 TYR134 VAL135 ASP136 PHE137 LEU138 GLU139 GLU140 ALA141 PHE142 SER143 GLN144 ALA145 SER146 GLN147 GLN148 GLY149 LEU150 ILE151 ARG152 PRO153 VAL154 ASP155 PRO156 THR157 VAL158 GLY159 ALA160 PHE161 SER162 PHE163 LEU164 GLY165 MET166 VAL167 LEU168 TRP169 ILE170 TYR171 LYS172 TRP173 PHE174 LYS175 PRO176 ASP177 GLY178 ARG179 LEU180 THR181 ASP182 GLU183 GLN184 ILE185 ALA186 ASP187 GLY188 MET189 VAL190 GLY191 MET192 LEU193 PHE194 PRO195 PRO196 PHE197
Unit 3 GLU13 ARG14 TYR15 ARG16 ALA17 ILE18 LEU19 GLU20 THR21 ALA22 ALA23 ARG24 LEU25 ILE26 CYS27 ASP28 ARG29 GLY30 TYR31 GLU32 GLY33 THR34 SER35 MET36 GLN37 GLU38 ILE39 ALA40 ALA41 ALA42 CYS43 ARG44 MET45 THR46 LYS47 ALA48 GLY49 LEU50 TYR51 HIS52 HIS53 ILE54 GLN55 ASN56 LYS57 GLU58 GLN59 LEU60 LEU61 PHE62 ALA63 ILE64 MET65 ASN66 TYR67 GLY68 MET69 ASP70 LEU71 PHE72 GLU73 GLU74 GLN75 VAL76 LEU77 SER78 ARG79 VAL80 GLN81 ASP82 ILE83 ALA84 ASN85 PRO86 VAL87 GLU88 ARG89 LEU90 ARG91 ALA92 CYS93 MET94 ARG95 HIS96 ASN97 ILE98 LEU99 LEU100 VAL101 THR102 ARG103 GLY104 TRP105 SER106 LYS107 GLU108 VAL109 ILE110 ILE111 ILE112 LEU113 HIS114 GLU115 HIS116 ALA117 THR118 LEU119 THR120 GLY121 GLU122 THR123 ARG124 ALA125 PHE126 ILE127 ASP128 ALA129 ARG130 LYS131 LYS132 LYS133 TYR134 VAL135 ASP136 PHE137 LEU138 GLU139 GLU140 ALA141 PHE142 SER143 GLN144 ALA145 SER146 GLN147 GLN148 GLY149 LEU150 ILE151 ARG152 PRO153 VAL154 ASP155 PRO156 THR157 VAL158 GLY159 ALA160 PHE161 SER162 PHE163 LEU164 GLY165 MET166 VAL167 LEU168 TRP169 ILE170 TYR171 LYS172 TRP173 PHE174 LYS175 PRO176 ASP177 GLY178 ARG179 LEU180 THR181 ASP182 GLU183 GLN184 ILE185 ALA186 ASP187 GLY188 MET189 VAL190 GLY191 MET192 LEU193 PHE194 PRO195 PRO196 PHE197
Unit 4 ARG14 TYR15 ARG16 ALA17 ILE18 LEU19 GLU20 THR21 ALA22 ALA23 ARG24 LEU25 ILE26 CYS27 ASP28 ARG29 GLY30 TYR31 GLU32 GLY33 THR34 SER35 MET36 GLN37 GLU38 ILE39 ALA40 ALA41 ALA42 CYS43 ARG44 MET45 THR46 LYS47 ALA48 GLY49 LEU50 TYR51 HIS52 HIS53 ILE54 GLN55 ASN56 LYS57 GLU58 GLN59 LEU60 LEU61 PHE62 ALA63 ILE64 MET65 ASN66 TYR67 GLY68 MET69 ASP70 LEU71 PHE72 GLU73 GLU74 GLN75 VAL76 LEU77 SER78 ARG79 VAL80 GLN81 ASP82 ILE83 ALA84 ASN85 PRO86 VAL87 GLU88 ARG89 LEU90 ARG91 ALA92 CYS93 MET94 ARG95 HIS96 ASN97 ILE98 LEU99 LEU100 VAL101 THR102 ARG103 GLY104 TRP105 SER106 LYS107 GLU108 VAL109 ILE110 ILE111 ILE112 LEU113 HIS114 GLU115 HIS116 ALA117 THR118 LEU119 THR120 GLY121 GLU122 THR123 ARG124 ALA125 PHE126 ILE127 ASP128 ALA129 ARG130 LYS131 LYS132 LYS133 TYR134 VAL135 ASP136 PHE137 LEU138 GLU139 GLU140 ALA141 PHE142 SER143 GLN144 ALA145 SER146 GLN147 GLN148 GLY149 LEU150 ILE151 ARG152 PRO153 VAL154 ASP155 PRO156 THR157 VAL158 GLY159 ALA160 PHE161 SER162 PHE163 LEU164 GLY165 MET166 VAL167 LEU168 TRP169 ILE170 TYR171 LYS172 TRP173 PHE174 LYS175 PRO176 ASP177 GLY178 ARG179 LEU180 THR181 ASP182 GLU183 GLN184 ILE185 ALA186 ASP187 GLY188 MET189 VAL190 GLY191 MET192 LEU193 PHE194 PRO195 PRO196 PHE197

Other macromolecules
Unit 5 DC1 DC2 DT3 DA4 DC5 DC6 DG7 DA8 DT9 DC10 DG11 DG12 DT13 DA14 DG15 DG16
Unit 6 DC1 DC2 DT3 DA4 DC5 DC6 DG7 DA8 DT9 DC10 DG11 DG12 DT13 DA14 DG15 DG16

Ligands
Unit 7 IVC301
Unit 8 IVC301
Unit 9 IVC301
Unit 10 IVC301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany