Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF6-8 AND H19 SEQU COMPLEX STRUCTURE
Keywords CCCTC-BINDING FACTOR, CTCF, ZINC FINGER, TRANSCRIPTION-DNA C
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5K5L     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   DNA (5'-D(*GP*TP*TP*GP*CP*CP*GP*CP*GP*TP*G)-3')  A 11 206 0
2  Other macromolecule   DNA (5'-D(P*AP*CP*GP*CP*GP*GP*CP*AP*AP*C)-3')  B 10 205 0
3  Other macromolecule   DNA (5'-D(*GP*TP*TP*GP*CP*CP*GP*CP*GP*TP*G)-3')  C 11 224 0
4  Other macromolecule   DNA (5'-D(P*AP*CP*GP*CP*GP*GP*CP*AP*AP*C)-3')  D 11 221 0
5  Protein   TRANSCRIPTIONAL REPRESSOR CTCF  E 56 469 0
6  Protein   TRANSCRIPTIONAL REPRESSOR CTCF  F 57 478 0
7  Protein   TRANSCRIPTIONAL REPRESSOR CTCF  G 84 695 0
8  Ligand   TRANSCRIPTIONAL REPRESSOR CTCF  E 2 0 2
9  Ligand   TRANSCRIPTIONAL REPRESSOR CTCF  F 2 0 2
10  Ligand   TRANSCRIPTIONAL REPRESSOR CTCF  G 3 0 3
11 Water     1 0 2
total       248 2498 9
Proteins
Unit 5 LYS436 PHE437 HIS438 CYS439 PRO440 HIS441 CYS442 ASP443 THR444 VAL445 ILE446 ALA447 ARG448 LYS449 SER450 ASP451 LEU452 GLY453 VAL454 HIS455 LEU456 ARG457 LYS458 GLN459 HIS460 SER461 TYR462 ILE463 GLU464 GLN465 GLY466 LYS467 LYS468 CYS469 ARG470 TYR471 CYS472 ASP473 ALA474 VAL475 PHE476 HIS477 GLU478 ARG479 TYR480 ALA481 LEU482 ILE483 GLN484 HIS485 GLN486 LYS487 SER488 HIS489 LYS490 ASN491
Unit 6 LYS436 PHE437 HIS438 CYS439 PRO440 HIS441 CYS442 ASP443 THR444 VAL445 ILE446 ALA447 ARG448 LYS449 SER450 ASP451 LEU452 GLY453 VAL454 HIS455 LEU456 ARG457 LYS458 GLN459 HIS460 SER461 TYR462 ILE463 GLU464 GLN465 GLY466 LYS467 LYS468 CYS469 ARG470 TYR471 CYS472 ASP473 ALA474 VAL475 PHE476 HIS477 GLU478 ARG479 TYR480 ALA481 LEU482 ILE483 GLN484 HIS485 GLN486 LYS487 SER488 HIS489 LYS490 ASN491 GLU492
Unit 7 GLU408 CYS409 TYR410 ILE411 CYS412 HIS413 ALA414 ARG415 PHE416 THR417 GLN418 SER419 GLY420 THR421 MET422 LYS423 MET424 HIS425 ILE426 LEU427 GLN428 LYS429 HIS430 THR431 GLU432 ASN433 VAL434 ALA435 LYS436 PHE437 HIS438 CYS439 PRO440 HIS441 CYS442 ASP443 THR444 VAL445 ILE446 ALA447 ARG448 LYS449 SER450 ASP451 LEU452 GLY453 VAL454 HIS455 LEU456 ARG457 LYS458 GLN459 HIS460 SER461 TYR462 ILE463 GLU464 GLN465 GLY466 LYS467 LYS468 CYS469 ARG470 TYR471 CYS472 ASP473 ALA474 VAL475 PHE476 HIS477 GLU478 ARG479 TYR480 ALA481 LEU482 ILE483 GLN484 HIS485 GLN486 LYS487 SER488 HIS489 LYS490 ASN491
Other macromolecules
Unit 1 DG1 DT2 DT3 DG4 DC5 DC6 DG7 DC8 DG9 DT10 DG11
Unit 2 DA2 DC3 DG4 DC5 DG6 DG7 DC8 DA9 DA10 DC11
Unit 3 DG1 DT2 DT3 DG4 DC5 DC6 DG7 DC8 DG9 DT10 DG11
Unit 4 DC1 DA2 DC3 DG4 DC5 DG6 DG7 DC8 DA9 DA10 DC11
Ligands
Unit 8 ZN501 ZN502
Unit 9 ZN501 ZN502
Unit 10 ZN501 ZN502 ZN503
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany