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| Title | CRYSTALS STRUCTURE OF ACYL-COA OXIDASE-2 IN CAENORHABDITIS E BOUND WITH FAD, ASCAROSIDE-COA, AND ATP | |
| Keywords | DAUER PHEROMONE; ASCAROSIDES; B-OXIDATION; ATP; CRYSTAL STRU OXIDOREDUCTASE | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 5K3J | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | ACYL-COENZYME A OXIDASE | A | 662 | 5275 | 0 |
| 2 | Protein | ACYL-COENZYME A OXIDASE | B | 659 | 5243 | 0 |
| 3 | Ligand | ACYL-COENZYME A OXIDASE | A | 3 | 0 | 148 |
| 4 | Ligand | ACYL-COENZYME A OXIDASE | B | 5 | 0 | 150 |
| 5 | Water | 163 | 0 | 163 | ||
| total | 1492 | 10518 | 461 |
| Unit 1 | ASN3 ARG4 SER5 ILE6 ARG7 ASP8 GLY9 ASP10 ASN11 PRO12 GLU13 LEU14 LEU15 GLU16 GLU17 ARG18 ARG19 MET20 ALA21 THR22 PHE23 ASP24 THR25 ASP26 LYS27 MET28 ALA29 ALA30 VAL31 ILE32 TYR33 GLY34 SER35 GLU36 GLU37 PHE38 ALA39 ARG40 ARG41 ARG42 ARG43 GLU44 ILE45 THR46 ASP47 ALA48 VAL49 SER50 LYS51 ILE52 PRO53 GLU54 LEU55 ALA56 ASP57 ILE58 LYS59 PRO60 TYR61 PRO62 PHE63 LEU64 THR65 ARG66 GLU67 GLU68 LYS69 VAL70 THR71 GLU72 GLY73 THR74 ARG75 LYS76 ILE77 SER78 ILE79 LEU80 THR81 LYS82 TYR83 LEU84 ASN85 GLN86 LEU87 ILE88 ASP89 ARG90 ASP91 ASN92 GLU93 GLU94 GLU95 SER96 LEU97 HIS98 LEU99 HIS100 ARG101 GLU102 VAL103 ILE104 GLY105 TYR106 GLU107 GLY108 HIS109 PRO110 PHE111 ALA112 LEU113 HIS114 ASP115 ALA116 LEU117 PHE118 ILE119 PRO120 THR121 LEU122 GLN123 SER124 GLN125 ALA126 SER127 ASP128 GLU129 GLN130 GLN131 GLU132 LYS133 TRP134 LEU135 GLU136 ARG137 ALA138 ARG139 ARG140 ARG141 GLU142 ILE143 ILE144 GLY145 CYS146 TYR147 ALA148 GLN149 THR150 GLU151 LEU152 GLY153 HIS154 GLY155 SER156 ASN157 LEU158 ARG159 ASN160 LEU161 GLU162 THR163 THR164 ALA165 VAL166 TYR167 ASP168 ILE169 ALA170 SER171 GLN172 GLU173 PHE174 VAL175 LEU176 HIS177 THR178 PRO179 THR180 THR181 THR182 ALA183 LEU184 LYS185 TRP186 TRP187 PRO188 GLY189 ALA190 LEU191 GLY192 LYS193 SER194 CYS195 ASN196 TYR197 ALA198 LEU199 VAL200 VAL201 ALA202 GLU203 LEU204 ILE205 ILE206 LYS207 ARG208 ASN209 ASN210 TYR211 GLY212 PRO213 HIS214 PHE215 PHE216 MET217 VAL218 GLN219 LEU220 ARG221 ASP222 GLU223 LYS224 THR225 HIS226 ILE227 PRO228 LEU229 LYS230 GLY231 VAL232 THR233 VAL234 GLY235 ASP236 ILE237 GLY238 PRO239 LYS240 MET241 ASN242 PHE243 ASN244 ALA245 ALA246 ASP247 ASN248 GLY249 TYR250 LEU251 GLY252 LEU253 ASN254 ASN255 LEU256 ARG257 VAL258 PRO259 ARG260 THR261 ASN262 LEU263 LEU264 MET265 ARG266 HIS267 CYS268 LYS269 VAL270 GLU271 ALA272 ASP273 GLY274 THR275 TYR276 VAL277 LYS278 PRO279 PRO280 HIS281 ALA282 LYS283 ILE284 GLY285 TYR286 SER287 GLY288 MET289 VAL290 LYS291 ILE292 ARG293 SER294 GLN295 MET296 ALA297 MET298 GLU299 GLN300 GLY301 LEU302 PHE303 LEU304 ALA305 HIS306 ALA307 LEU308 THR309 ILE310 ALA311 ALA312 ARG313 TYR314 SER315 ALA316 VAL317 ARG318 ARG319 GLN320 GLY321 HIS322 LEU323 ASP324 ASP325 LYS326 GLN327 VAL328 GLU329 VAL330 LYS331 VAL332 LEU333 ASP334 TYR335 GLN336 THR337 GLN338 GLN339 HIS340 ARG341 LEU342 PHE343 PRO344 SER345 LEU346 ALA347 ARG348 ALA349 TYR350 ALA351 PHE352 ILE353 PHE354 THR355 GLY356 PHE357 GLU358 THR359 ILE360 HIS361 LEU362 TYR363 SER364 GLN365 LEU366 LEU367 LYS368 ASP369 VAL370 ASP371 MET372 GLY373 ASN374 THR375 SER376 GLY377 MET378 ALA379 ASP380 LEU381 HIS382 ALA383 LEU384 THR385 SER386 GLY387 LEU388 LYS389 SER390 VAL391 VAL392 ALA393 HIS394 GLU395 THR396 GLY397 GLU398 GLY399 ILE400 GLU401 GLN402 ALA403 ARG404 MET405 ALA406 CYS407 GLY408 GLY409 HIS410 GLY411 TYR412 SER413 MET414 ALA415 SER416 TYR417 ILE418 SER419 VAL420 VAL421 TYR422 GLY423 ILE424 ALA425 ILE426 GLY427 GLY428 CYS429 THR430 TYR431 ALA432 GLY433 GLU434 ASN435 MET436 VAL437 MET438 LEU439 LEU440 GLN441 LEU442 ALA443 ARG444 TYR445 LEU446 VAL447 LYS448 SER449 VAL450 GLU451 LEU452 ILE453 LYS454 ALA455 GLY456 LYS457 ALA458 LYS459 LYS460 LEU461 GLY462 PRO463 VAL464 ALA465 SER466 TYR467 LEU468 ALA469 ASP470 LYS471 SER472 ASP473 GLU474 THR475 ASP476 LEU477 THR478 SER479 LEU480 ASN481 GLY482 TYR483 VAL484 LYS485 MET486 PHE487 GLU488 ASN489 MET490 ALA491 ARG492 ARG493 GLN494 ALA495 TRP496 LYS497 ALA498 THR499 GLU500 LYS501 PHE502 LEU503 LYS504 LEU505 MET506 GLU507 SER508 GLY509 GLU510 SER511 ARG512 GLU513 VAL514 ALA515 TRP516 ASN517 LYS518 SER519 ALA520 VAL521 GLU522 LEU523 THR524 ARG525 ALA526 SER527 ARG528 LEU529 HIS530 THR531 ARG532 LEU533 PHE534 ILE535 ILE536 GLU537 ALA538 PHE539 MET540 ARG541 ARG542 VAL543 SER544 ARG545 ILE546 GLU547 ASP548 ILE549 PRO550 VAL551 LYS552 GLU553 VAL554 LEU555 THR556 ASP557 LEU558 LEU559 HIS560 LEU561 HIS562 VAL563 ASN564 TYR565 GLU566 LEU567 LEU568 ASP569 VAL570 ALA571 THR572 TYR573 ALA574 LEU575 GLU576 PHE577 MET578 SER579 PHE580 THR581 GLN582 LEU583 ASP584 TYR585 VAL586 ARG587 ASP588 GLN589 LEU590 TYR591 LEU592 TYR593 LEU594 GLU595 LYS596 ILE597 ARG598 PRO599 ASN600 ALA601 VAL602 SER603 LEU604 VAL605 ASP606 SER607 PHE608 GLN609 ILE610 SER611 ASP612 MET613 GLN614 LEU615 ARG616 SER617 VAL618 LEU619 GLY620 ARG621 ARG622 ASP623 GLY624 HIS625 VAL626 TYR627 GLU628 ASN629 LEU630 PHE631 LYS632 TRP633 ALA634 LYS635 SER636 SER637 PRO638 LEU639 ASN640 ASN641 ALA642 ASP643 VAL644 LEU645 PRO646 SER647 VAL648 GLU649 LYS650 TYR651 LEU652 LYS653 PRO654 MET655 MET656 GLU657 LYS658 ALA659 LYS660 LEU661 ALA662 ALA663 ALA664 |
| Unit 2 | ALA2 ASN3 ARG4 SER5 ILE6 ARG7 ASP8 GLY9 ASP10 ASN11 PRO12 GLU13 LEU14 LEU15 GLU16 GLU17 ARG18 ARG19 MET20 ALA21 THR22 PHE23 ASP24 THR25 ASP26 LYS27 MET28 ALA29 ALA30 VAL31 ILE32 TYR33 GLY34 SER35 GLU36 GLU37 PHE38 ALA39 ARG40 ARG41 ARG42 ARG43 GLU44 ILE45 THR46 ASP47 ALA48 VAL49 SER50 LYS51 ILE52 PRO53 GLU54 LEU55 ALA56 ASP57 ILE58 LYS59 PRO60 TYR61 PRO62 PHE63 LEU64 THR65 ARG66 GLU67 GLU68 LYS69 VAL70 THR71 GLU72 GLY73 THR74 ARG75 LYS76 ILE77 SER78 ILE79 LEU80 THR81 LYS82 TYR83 LEU84 ASN85 GLN86 LEU87 ILE88 ASP89 ARG90 ASP91 ASN92 GLU93 GLU94 GLU95 SER96 LEU97 HIS98 LEU99 HIS100 ARG101 GLU102 VAL103 ILE104 GLY105 TYR106 GLU107 GLY108 HIS109 PRO110 PHE111 ALA112 LEU113 HIS114 ASP115 ALA116 LEU117 PHE118 ILE119 PRO120 THR121 LEU122 GLN123 SER124 GLN125 ALA126 SER127 ASP128 GLU129 GLN130 GLN131 GLU132 LYS133 TRP134 LEU135 GLU136 ARG137 ALA138 ARG139 ARG140 ARG141 GLU142 ILE143 ILE144 GLY145 CYS146 TYR147 ALA148 GLN149 THR150 GLU151 LEU152 GLY153 HIS154 GLY155 SER156 ASN157 LEU158 ARG159 ASN160 LEU161 GLU162 THR163 THR164 ALA165 VAL166 TYR167 ASP168 ILE169 ALA170 SER171 GLN172 GLU173 PHE174 VAL175 LEU176 HIS177 THR178 PRO179 THR180 THR181 THR182 ALA183 LEU184 LYS185 TRP186 TRP187 PRO188 GLY189 ALA190 LEU191 GLY192 LYS193 SER194 CYS195 ASN196 TYR197 ALA198 LEU199 VAL200 VAL201 ALA202 GLU203 LEU204 ASN210 TYR211 GLY212 PRO213 HIS214 PHE215 PHE216 MET217 VAL218 GLN219 LEU220 ARG221 ASP222 GLU223 LYS224 THR225 HIS226 ILE227 PRO228 LEU229 LYS230 GLY231 VAL232 THR233 VAL234 GLY235 ASP236 ILE237 GLY238 PRO239 LYS240 MET241 ASN242 PHE243 ASN244 ALA245 ALA246 ASP247 ASN248 GLY249 TYR250 LEU251 GLY252 LEU253 ASN254 ASN255 LEU256 ARG257 VAL258 PRO259 ARG260 THR261 ASN262 LEU263 LEU264 MET265 ARG266 HIS267 CYS268 LYS269 VAL270 GLU271 ALA272 ASP273 GLY274 THR275 TYR276 VAL277 LYS278 PRO279 PRO280 HIS281 ALA282 LYS283 ILE284 GLY285 TYR286 SER287 GLY288 MET289 VAL290 LYS291 ILE292 ARG293 SER294 GLN295 MET296 ALA297 MET298 GLU299 GLN300 GLY301 LEU302 PHE303 LEU304 ALA305 HIS306 ALA307 LEU308 THR309 ILE310 ALA311 ALA312 ARG313 TYR314 SER315 ALA316 VAL317 ARG318 ARG319 GLN320 GLY321 HIS322 LEU323 ASP324 ASP325 LYS326 GLN327 VAL328 GLU329 VAL330 LYS331 VAL332 LEU333 ASP334 TYR335 GLN336 THR337 GLN338 GLN339 HIS340 ARG341 LEU342 PHE343 PRO344 SER345 LEU346 ALA347 ARG348 ALA349 TYR350 ALA351 PHE352 ILE353 PHE354 THR355 GLY356 PHE357 GLU358 THR359 ILE360 HIS361 LEU362 TYR363 SER364 GLN365 LEU366 LEU367 LYS368 ASP369 VAL370 ASP371 MET372 GLY373 ASN374 THR375 SER376 GLY377 MET378 ALA379 ASP380 LEU381 HIS382 ALA383 LEU384 THR385 SER386 GLY387 LEU388 LYS389 SER390 VAL391 VAL392 ALA393 HIS394 GLU395 THR396 GLY397 GLU398 GLY399 ILE400 GLU401 GLN402 ALA403 ARG404 MET405 ALA406 CYS407 GLY408 GLY409 HIS410 GLY411 TYR412 SER413 MET414 ALA415 SER416 TYR417 ILE418 SER419 VAL420 VAL421 TYR422 GLY423 ILE424 ALA425 ILE426 GLY427 GLY428 CYS429 THR430 TYR431 ALA432 GLY433 GLU434 ASN435 MET436 VAL437 MET438 LEU439 LEU440 GLN441 LEU442 ALA443 ARG444 TYR445 LEU446 VAL447 LYS448 SER449 VAL450 GLU451 LEU452 ILE453 LYS454 ALA455 GLY456 LYS457 ALA458 LYS459 LYS460 LEU461 GLY462 PRO463 VAL464 ALA465 SER466 TYR467 LEU468 ALA469 ASP470 LYS471 SER472 ASP473 GLU474 THR475 ASP476 LEU477 THR478 SER479 LEU480 ASN481 GLY482 TYR483 VAL484 LYS485 MET486 PHE487 GLU488 ASN489 MET490 ALA491 ARG492 ARG493 GLN494 ALA495 TRP496 LYS497 ALA498 THR499 GLU500 LYS501 PHE502 LEU503 LYS504 LEU505 MET506 GLU507 SER508 GLY509 GLU510 SER511 ARG512 GLU513 VAL514 ALA515 TRP516 ASN517 LYS518 SER519 ALA520 VAL521 GLU522 LEU523 THR524 ARG525 ALA526 SER527 ARG528 LEU529 HIS530 THR531 ARG532 LEU533 PHE534 ILE535 ILE536 GLU537 ALA538 PHE539 MET540 ARG541 ARG542 VAL543 SER544 ARG545 ILE546 GLU547 ASP548 ILE549 PRO550 VAL551 LYS552 GLU553 VAL554 LEU555 THR556 ASP557 LEU558 LEU559 HIS560 LEU561 HIS562 VAL563 ASN564 TYR565 GLU566 LEU567 LEU568 ASP569 VAL570 ALA571 THR572 TYR573 ALA574 LEU575 GLU576 PHE577 MET578 SER579 PHE580 THR581 GLN582 LEU583 ASP584 TYR585 VAL586 ARG587 ASP588 GLN589 LEU590 TYR591 LEU592 TYR593 LEU594 GLU595 LYS596 ILE597 ARG598 PRO599 ASN600 ALA601 VAL602 SER603 LEU604 VAL605 ASP606 SER607 PHE608 GLN609 ILE610 SER611 ASP612 MET613 GLN614 LEU615 ARG616 SER617 VAL618 LEU619 GLY620 ARG621 ARG622 ASP623 GLY624 HIS625 VAL626 TYR627 GLU628 ASN629 LEU630 PHE631 LYS632 TRP633 ALA634 LYS635 SER636 SER637 PRO638 LEU639 ASN640 ASN641 ALA642 ASP643 VAL644 LEU645 PRO646 SER647 VAL648 GLU649 LYS650 TYR651 LEU652 LYS653 PRO654 MET655 MET656 GLU657 LYS658 ALA659 LYS660 LEU661 ALA662 ALA663 ALA664 HIS665 |
| Unit 3 | FAD701 ATP702 6QA703 |
| Unit 4 | MG701 FAD702 ATP703 MG704 6QA705 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |